RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 ADCYAP1R1P41586 468 aa13.26□□□□□ -0.29
IGHV4-28-201ENST00000390612 GJA9P57773 515 aa13.26□□□□□ -0.29
IGHV4-28-201ENST00000390612 USH1GQ495M9 461 aa13.26□□□□□ -0.29
IGHV4-28-201ENST00000390612 RNF20Q5VTR2 975 aa13.26□□□□□ -0.29
IGHV4-28-201ENST00000390612 SLC39A5Q6ZMH5 540 aa13.26□□□□□ -0.29
IGHV4-28-201ENST00000390612 CATIPQ7Z7H3 387 aa13.26□□□□□ -0.29
IGHV4-28-201ENST00000390612 SGMS1Q86VZ5 419 aa13.26□□□□□ -0.29
IGHV4-28-201ENST00000390612 ZNF654Q8IZM8 581 aa13.26□□□□□ -0.29
IGHV4-28-201ENST00000390612 ADD3Q9UEY8 706 aaKnown RBP13.26□□□□□ -0.29
IGHV4-28-201ENST00000390612 SYNRGQ9UMZ2 1314 aa13.26□□□□□ -0.29
IGHV4-28-201ENST00000390612 COLQQ9Y215 455 aaPredicted RBP13.26□□□□□ -0.29
IGHV4-28-201ENST00000390612 PTPDC1A2A3K4 754 aa13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 CALML3P27482 149 aa13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 ADCK5Q3MIX3 580 aa13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 IQSEC1Q6DN90 963 aa13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 RNF180Q86T96 592 aa13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 C7orf61Q8IZ16 206 aa13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 SYTL5Q8TDW5 730 aaPredicted RBP13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 NEK1Q96PY6 1258 aa13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 AMNQ9BXJ7 453 aa13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 VTA1Q9NP79 307 aa13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 PDGFCQ9NRA1 345 aa13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 COL20A1Q9P218 1284 aa13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 MRPL11Q9Y3B7 192 aaKnown RBP13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 LTBP2Q14767 1821 aa13.25□□□□□ -0.29
IGHV4-28-201ENST00000390612 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 MYADML2A6NDP7 307 aa13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 EPB41L2O43491 1005 aaKnown RBP13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 HSD17B4P51659 736 aa13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 IRX5P78411 483 aaPredicted RBP13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 TNFAIP2Q03169 654 aa13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 HABP4Q5JVS0 413 aaKnown RBP13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 DHX32Q7L7V1 743 aaKnown RBP13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 MCF2L2Q86YR7 1114 aa13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 SAMD3Q8N6K7 520 aa13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 PIGSQ96S52 555 aa13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 GDF15Q99988 308 aa13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 SPZ1Q9BXG8 430 aa13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 Q9Y3F1 56 aa13.24□□□□□ -0.29
IGHV4-28-201ENST00000390612 SCN10AQ9Y5Y9 1956 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 PNMA6FA0A0J9YX94 578 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 A0A1W2PQ45 241 aaPredicted RBP13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 A0A1W2PQY0 241 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 DHX16O60231 1041 aaKnown RBP13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 SMPD1P17405 629 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 HSPA4P34932 840 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 ACLYP53396 1101 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 ATN1P54259 1190 aaPredicted RBP13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 RTP1P59025 263 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 KRT32Q14532 448 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 KCNA10Q16322 511 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 TMEM63BQ5T3F8 832 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 FBXO16Q8IX29 292 aaPredicted RBP13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 TAAR1Q96RJ0 339 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 MYL10Q9BUA6 226 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 LRRC2Q9BYS8 371 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 MAP3K20Q9NYL2 800 aaKnown RBP13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 PCDHA1Q9Y5I3 950 aa13.23□□□□□ -0.29
IGHV4-28-201ENST00000390612 MOXD2PA6NHM9 499 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 CALM1P0DP23 149 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 CALM2P0DP24 149 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 CALM3P0DP25 149 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 KIF5BP33176 963 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 BMP8BP34820 402 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 GNAQP50148 359 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 TRAF1Q13077 416 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 DUSP28Q4G0W2 176 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 EEPD1Q7L9B9 569 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 SRBD1Q8N5C6 995 aaKnown RBP13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 NUP133Q8WUM0 1156 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 FERMT2Q96AC1 680 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 IWS1Q96ST2 819 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 LZTS2Q9BRK4 669 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 RBM27Q9P2N5 1060 aaKnown RBP13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 ZMYND8Q9ULU4 1186 aaPredicted RBP13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 SNX14Q9Y5W7 946 aa13.22□□□□□ -0.29
IGHV4-28-201ENST00000390612 ELP1O95163 1332 aa13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 CCDC69A6NI79 296 aa13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 REC8O95072 547 aa13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 PLEKHA8P1O95397 391 aa13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 HMGB1P09429 215 aaKnown RBP13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 C6orf222P0C671 652 aaPredicted RBP13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 PTGS1P23219 599 aa13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 CDK7P50613 346 aa13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 GNASQ5JWF2 1037 aa13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 APOA5Q6Q788 366 aa13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 HOMER1Q86YM7 354 aa13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 FBXL16Q8N461 479 aa13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 FANCBQ8NB91 859 aa13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 PCSK9Q8NBP7 692 aaKnown RBP13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 CTCFLQ8NI51 663 aaPredicted RBP13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 NSUN6Q8TEA1 469 aaKnown RBP13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 SPC25Q9HBM1 224 aa13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 BRPF3Q9ULD4 1205 aa13.21□□□□□ -0.29
IGHV4-28-201ENST00000390612 B4DLN1 442 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 ASGR1P07306 291 aa13.2□□□□□ -0.3
IGHV4-28-201ENST00000390612 SYN1P17600 705 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms