RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 PDE4AP27815 886 aa15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 RPS6P62753 249 aaKnown RBP15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 SMAD3P84022 425 aaKnown RBP15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 FPGSQ05932 587 aa15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 IFIT1BQ5T764 474 aaKnown RBP15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 RASGRP2Q7LDG7 609 aa15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 ENAHQ8N8S7 591 aaPredicted RBP15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 SLC43A3Q8NBI5 491 aa15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 WDR11Q9BZH6 1224 aa15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 MTMR10Q9NXD2 777 aa15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 STXBP5LQ9Y2K9 1186 aa15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 TNKSO95271 1327 aa15.89■□□□□ 0.13
TRBV4-1-201ENST00000390357 KPNA6O60684 536 aa15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 GSPT1P15170 499 aaKnown RBP15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 CHMLP26374 656 aa15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 CALML3P27482 149 aa15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 CPT1AP50416 773 aa15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 PDE4DQ08499 809 aa15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 MFSD5Q6N075 450 aa15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 ADGRF4Q8IZF3 695 aa15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 TMEM199Q8N511 208 aa15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 UBA5Q9GZZ9 404 aa15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 POLR3EQ9NVU0 708 aa15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 MRPL11Q9Y3B7 192 aaKnown RBP15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 ASTN1O14525 1302 aa15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 MYH6P13533 1939 aa15.88■□□□□ 0.13
TRBV4-1-201ENST00000390357 ERICH2A1L162 156 aa15.87■□□□□ 0.13
TRBV4-1-201ENST00000390357 GOLGA8HP0CJ92 632 aa15.87■□□□□ 0.13
TRBV4-1-201ENST00000390357 EDNRBP24530 442 aa15.87■□□□□ 0.13
TRBV4-1-201ENST00000390357 PPIGQ13427 754 aaKnown RBP eCLIP15.87■□□□□ 0.13
TRBV4-1-201ENST00000390357 ITGA7Q13683 1181 aa15.87■□□□□ 0.13
TRBV4-1-201ENST00000390357 CDC37Q16543 378 aaPredicted RBP15.87■□□□□ 0.13
TRBV4-1-201ENST00000390357 EEPD1Q7L9B9 569 aa15.87■□□□□ 0.13
TRBV4-1-201ENST00000390357 FAM126BQ8IXS8 530 aa15.87■□□□□ 0.13
TRBV4-1-201ENST00000390357 SCFD2Q8WU76 684 aa15.87■□□□□ 0.13
TRBV4-1-201ENST00000390357 IWS1Q96ST2 819 aa15.87■□□□□ 0.13
TRBV4-1-201ENST00000390357 PDGFCQ9NRA1 345 aa15.87■□□□□ 0.13
TRBV4-1-201ENST00000390357 TBX21Q9UL17 535 aa15.87■□□□□ 0.13
TRBV4-1-201ENST00000390357 SZT2Q5T011 3432 aa15.87■□□□□ 0.13
TRBV4-1-201ENST00000390357 LCTP09848 1927 aa15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 CD4P01730 458 aa15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 SUPT20HL2P0C7V6 817 aa15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 ITGB8P26012 769 aa15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 BEX3Q00994 111 aa15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 SART3Q15020 963 aaKnown RBP15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 SEC23AQ15436 765 aa15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 ZNF697Q5TEC3 545 aa15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 CXCL17Q6UXB2 119 aa15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 FBXO11Q86XK2 927 aa15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 FBXO16Q8IX29 292 aaPredicted RBP15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 NCOA7Q8NI08 942 aa15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 NSUN6Q8TEA1 469 aaKnown RBP15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 GPHNQ9NQX3 736 aaPredicted RBP15.86■□□□□ 0.13
TRBV4-1-201ENST00000390357 TMEM265A0A087WTH1 108 aa15.85■□□□□ 0.13
TRBV4-1-201ENST00000390357 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.85■□□□□ 0.13
TRBV4-1-201ENST00000390357 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.85■□□□□ 0.13
TRBV4-1-201ENST00000390357 DHX16O60231 1041 aaKnown RBP15.85■□□□□ 0.13
TRBV4-1-201ENST00000390357 TTLL4Q14679 1199 aa15.85■□□□□ 0.13
TRBV4-1-201ENST00000390357 USH1GQ495M9 461 aa15.85■□□□□ 0.13
TRBV4-1-201ENST00000390357 C9orf50Q5SZB4 431 aa15.85■□□□□ 0.13
TRBV4-1-201ENST00000390357 PURBQ96QR8 312 aaKnown RBP15.85■□□□□ 0.13
TRBV4-1-201ENST00000390357 MTA3Q9BTC8 594 aa15.85■□□□□ 0.13
TRBV4-1-201ENST00000390357 AMNQ9BXJ7 453 aa15.85■□□□□ 0.13
TRBV4-1-201ENST00000390357 PALM3A6NDB9 673 aaPredicted RBP15.84■□□□□ 0.13
TRBV4-1-201ENST00000390357 KLRF2D3W0D1 207 aa15.84■□□□□ 0.13
TRBV4-1-201ENST00000390357 SGSM2O43147 1006 aa15.84■□□□□ 0.13
TRBV4-1-201ENST00000390357 CYP21A2P08686 494 aa15.84■□□□□ 0.13
TRBV4-1-201ENST00000390357 IRX5P78411 483 aaPredicted RBP15.84■□□□□ 0.13
TRBV4-1-201ENST00000390357 STXBP2Q15833 593 aa15.84■□□□□ 0.13
TRBV4-1-201ENST00000390357 SLC30A10Q6XR72 485 aa15.84■□□□□ 0.13
TRBV4-1-201ENST00000390357 RALYLQ86SE5 291 aaKnown RBP15.84■□□□□ 0.13
TRBV4-1-201ENST00000390357 MAP4K1Q92918 833 aa15.84■□□□□ 0.13
TRBV4-1-201ENST00000390357 RNPC3Q96LT9 517 aaKnown RBP15.84■□□□□ 0.13
TRBV4-1-201ENST00000390357 JMJD4Q9H9V9 463 aa15.84■□□□□ 0.13
TRBV4-1-201ENST00000390357 VAT1LQ9HCJ6 419 aa15.84■□□□□ 0.13
TRBV4-1-201ENST00000390357 LRRC37A2A6NM11 1700 aa15.83■□□□□ 0.13
TRBV4-1-201ENST00000390357 A6NJR5 290 aa15.83■□□□□ 0.12
TRBV4-1-201ENST00000390357 PTPN11Q06124 597 aaPredicted RBP15.83■□□□□ 0.12
TRBV4-1-201ENST00000390357 PPP2R5BQ15173 497 aa15.83■□□□□ 0.12
TRBV4-1-201ENST00000390357 QRICH1Q2TAL8 776 aa15.83■□□□□ 0.12
TRBV4-1-201ENST00000390357 Q7L0L9 218 aa15.83■□□□□ 0.12
TRBV4-1-201ENST00000390357 RPUSD2Q8IZ73 545 aaKnown RBP15.83■□□□□ 0.12
TRBV4-1-201ENST00000390357 TMTC2Q8N394 836 aa15.83■□□□□ 0.12
TRBV4-1-201ENST00000390357 SLC17A8Q8NDX2 589 aa15.83■□□□□ 0.12
TRBV4-1-201ENST00000390357 OR6J1Q8NGC5 347 aa15.83■□□□□ 0.12
TRBV4-1-201ENST00000390357 MTMR8Q96EF0 704 aa15.83■□□□□ 0.12
TRBV4-1-201ENST00000390357 MTIF3Q9H2K0 278 aaKnown RBP15.83■□□□□ 0.12
TRBV4-1-201ENST00000390357 LAMA3Q16787 3333 aa15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 IFIT3O14879 490 aaKnown RBP15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 ZBTB5O15062 677 aa15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 EIF3JO75822 258 aaKnown RBP15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 TXNP10599 105 aaKnown RBP15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 GHRHRQ02643 423 aa15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 PTH1RQ03431 593 aa15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 WTAPQ15007 396 aa15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 PSRC1Q6PGN9 363 aaPredicted RBP15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 KCNV1Q6PIU1 500 aa15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 CYB5R4Q7L1T6 521 aa15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 SYTL5Q8TDW5 730 aaPredicted RBP15.82■□□□□ 0.12
TRBV4-1-201ENST00000390357 RMDN3Q96TC7 470 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms