RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 FAM169AQ9Y6X4 670 aa14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 PLEKHA8P1O95397 391 aa14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 MYL1P05976 194 aa14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 U2AF2P26368 475 aaKnown RBP eCLIP14.31□□□□□ -0.121e-7■■■□□ 18.2
PTPRN2-203ENST00000389418 TRIM28Q13263 835 aaKnown RBP14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 STRBPQ96SI9 672 aaKnown RBP14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 MTA3Q9BTC8 594 aa14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 MIS12Q9H081 205 aa14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 RIMS1Q86UR5 1692 aaKnown RBP14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 VWDEQ8N2E2 1590 aa14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 LRRIQ4A6NIV6 560 aa14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 STK10O94804 968 aaKnown RBP14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 EIF2AK2P19525 551 aaKnown RBP14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 CDK8P49336 464 aa14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 IRX5P78411 483 aaPredicted RBP14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 ITPK1Q13572 414 aa14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 ATP6V0A1Q93050 837 aa14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 BRIP1Q9BX63 1249 aa14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 ARMCX3Q9UH62 379 aaPredicted RBP14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 PCDHA4Q9UN74 947 aa14.31□□□□□ -0.12
PTPRN2-203ENST00000389418 ATP5DP30049 168 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 PPP2R5AQ15172 486 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 FAM160B2Q86V87 743 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 CLEC10AQ8IUN9 316 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 FAM178BQ8IXR5 827 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 FEZ2Q9UHY8 353 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 DLATP10515 647 aaKnown RBP14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 SESTD1Q86VW0 696 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 DGKHQ86XP1 1220 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 OTUD6BQ8N6M0 293 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 GSDMAQ96QA5 445 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 KIAA1024Q9UPX6 916 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 CEP170BQ9Y4F5 1589 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 ECE2O60344 883 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 ARL1P40616 181 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 CFAP58Q5T655 872 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 SYMPKQ92797 1274 aaKnown RBP14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 ST7Q9NRC1 585 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 POLR3EQ9NVU0 708 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 USTQ9Y2C2 406 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 TLDC2A0PJX2 215 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 PRPF6O94906 941 aaKnown RBP14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 BMP3P12645 472 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 STAT1P42224 750 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 GPSM2P81274 684 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 KIF23Q02241 960 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 LRRC41Q15345 812 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 DCUN1D2Q6PH85 259 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 ZNF365Q70YC5 407 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 ATRIPQ8WXE1 791 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 FAM204AQ9H8W3 233 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 CTTNBP2NLQ9P2B4 639 aa14.3□□□□□ -0.12
PTPRN2-203ENST00000389418 OSBPP22059 807 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 CRKP46108 304 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 DNAJC21Q5F1R6 531 aaKnown RBP14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 OR8K1Q8NGG5 319 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 TIGD1Q96MW7 591 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 RCOR1Q9UKL0 485 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 LRRC7Q96NW7 1537 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 IFRD2Q12894 506 aaPredicted RBP14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 FAM26FQ5R3K3 315 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 SPOUT1Q5T280 376 aaKnown RBP14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 ARMC9Q7Z3E5 817 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 PODNQ7Z5L7 613 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 TBCKQ8TEA7 893 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 PPM1EQ8WY54 764 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 MRRFQ96E11 262 aaKnown RBP14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 CCDC114Q96M63 670 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 JCADQ9P266 1359 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 CRB1P82279 1406 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 ALDH3A1P30838 453 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 SEPT2Q15019 361 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 RFX7Q2KHR2 1363 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 SH2B2O14492 632 aaPredicted RBP14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 IVLP07476 585 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 LINC00116Q8NCU8 138 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 RPGRIP1Q96KN7 1286 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 PAIP2Q9BPZ3 127 aaKnown RBP14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 ANKFY1Q9P2R3 1169 aa14.29□□□□□ -0.12
PTPRN2-203ENST00000389418 ABCC12Q96J65 1359 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 CALRP27797 417 aaKnown RBP14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 LIG4P49917 911 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 RRAGAQ7L523 313 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 ANKS4BQ8N8V4 417 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 LINC00301Q8NCQ3 95 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 IPO4Q8TEX9 1081 aaKnown RBP14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 TRIM31Q9BZY9 425 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 NRXN1Q9ULB1 1477 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 ATF7P17544 494 aaPredicted RBP14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 ELF2Q15723 593 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 PPP2R5EQ16537 467 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 RNF34Q969K3 372 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 KCNJ18B7U540 433 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 CAPN2P17655 700 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 KCNJ12Q14500 433 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 WRNIP1Q96S55 665 aa14.28□□□□□ -0.12
PTPRN2-203ENST00000389418 DESI2Q9BSY9 194 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms