RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 VSNL1P62760 191 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 MFSD14BQ5SR56 506 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 CCDC122Q5T0U0 273 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 TAF3Q5VWG9 929 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 NOC3LQ8WTT2 800 aaKnown RBP13.59□□□□□ -0.23
RFC3-201ENST00000380071 HNRNPLLQ8WVV9 542 aaKnown RBP13.59□□□□□ -0.23
RFC3-201ENST00000380071 RPGRQ92834 1020 aaKnown RBP13.59□□□□□ -0.23
RFC3-201ENST00000380071 SEMA6BQ9H3T3 888 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 SRGAP2O75044 1071 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 MTIF2P46199 727 aaKnown RBP13.59□□□□□ -0.23
RFC3-201ENST00000380071 FAM193AP78312 1265 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 MCM6Q14566 821 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 MEA1Q16626 185 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 PCMTD1Q96MG8 357 aaPredicted RBP13.59□□□□□ -0.23
RFC3-201ENST00000380071 NOC4LQ9BVI4 516 aaKnown RBP13.59□□□□□ -0.23
RFC3-201ENST00000380071 LACRTQ9GZZ8 138 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 HAUS4Q9H6D7 363 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 MAGEF1Q9HAY2 307 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 POLLQ9UGP5 575 aa13.59□□□□□ -0.23
RFC3-201ENST00000380071 BICDL2A1A5D9 508 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 ATP1A1P05023 1023 aaKnown RBP13.58□□□□□ -0.24
RFC3-201ENST00000380071 EIF6P56537 245 aaKnown RBP13.58□□□□□ -0.24
RFC3-201ENST00000380071 SEMA3FQ13275 785 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 GRB10Q13322 594 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 TRAPPC11Q7Z392 1133 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 REXO1Q8N1G1 1221 aaKnown RBP13.58□□□□□ -0.24
RFC3-201ENST00000380071 CCDC47Q96A33 483 aaKnown RBP13.58□□□□□ -0.24
RFC3-201ENST00000380071 MTMR9Q96QG7 549 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 RIOX1Q9H6W3 641 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 NHEJ1Q9H9Q4 299 aaPredicted RBP13.58□□□□□ -0.24
RFC3-201ENST00000380071 BLOC1S4Q9NUP1 217 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 GGA1Q9UJY5 639 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 DUSP10Q9Y6W6 482 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 MYMKA6NI61 221 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 PSMD14O00487 310 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 SLC37A4O43826 429 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 PDHBP11177 359 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 DYMQ7RTS9 669 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 CLEC10AQ8IUN9 316 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 LRRC47Q8N1G4 583 aaKnown RBP13.58□□□□□ -0.24
RFC3-201ENST00000380071 CALML4Q96GE6 196 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 PNMA5Q96PV4 448 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 L1RE1Q9UN81 338 aa13.58□□□□□ -0.24
RFC3-201ENST00000380071 CCDC66A2RUB6 948 aa13.57□□□□□ -0.24
RFC3-201ENST00000380071 POTEB2H3BUK9 544 aa13.57□□□□□ -0.24
RFC3-201ENST00000380071 TDP2O95551 362 aa13.57□□□□□ -0.24
RFC3-201ENST00000380071 ATP2B4P23634 1241 aa13.57□□□□□ -0.24
RFC3-201ENST00000380071 NOVP48745 357 aa13.57□□□□□ -0.24
RFC3-201ENST00000380071 AMPD3Q01432 767 aa13.57□□□□□ -0.24
RFC3-201ENST00000380071 CYP27A1Q02318 531 aa13.57□□□□□ -0.24
RFC3-201ENST00000380071 PICALMQ13492 652 aa13.57□□□□□ -0.24
RFC3-201ENST00000380071 KIAA1328Q86T90 577 aa13.57□□□□□ -0.24
RFC3-201ENST00000380071 NUDT12Q9BQG2 462 aa13.57□□□□□ -0.24
RFC3-201ENST00000380071 PDE11AQ9HCR9 933 aa13.57□□□□□ -0.24
RFC3-201ENST00000380071 LRRC4BQ9NT99 713 aa13.57□□□□□ -0.24
RFC3-201ENST00000380071 LRWD1Q9UFC0 647 aa13.57□□□□□ -0.24
RFC3-201ENST00000380071 SMARCA1P28370 1054 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 ZBED6P86452 979 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 CALCRLQ16602 461 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 CNNM4Q6P4Q7 775 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 SV2BQ7L1I2 683 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 MMS19Q96T76 1030 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 NUP58Q9BVL2 599 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 LTBP4Q8N2S1 1624 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 POTEMA6NI47 508 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 PLEKP08567 350 aaPredicted RBP13.56□□□□□ -0.24
RFC3-201ENST00000380071 PLCG2P16885 1265 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 KRT83P78385 493 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 HDXQ7Z353 690 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 ZSCAN29Q8IWY8 852 aaPredicted RBP13.56□□□□□ -0.24
RFC3-201ENST00000380071 NEK11Q8NG66 645 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 TBC1D16Q8TBP0 767 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 JAKMIP2Q96AA8 810 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 FAM163AQ96GL9 167 aaPredicted RBP13.56□□□□□ -0.24
RFC3-201ENST00000380071 GPCPD1Q9NPB8 672 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
RFC3-201ENST00000380071 MTMR4Q9NYA4 1195 aa13.56□□□□□ -0.24
RFC3-201ENST00000380071 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.55□□□□□ -0.24
RFC3-201ENST00000380071 EPHB6O15197 1021 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 N4BP1O75113 896 aaKnown RBP13.55□□□□□ -0.24
RFC3-201ENST00000380071 AKR1B1P15121 316 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 ERCC3P19447 782 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 TUBB4BP68371 445 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 CRY2Q49AN0 593 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 CENPPQ6IPU0 288 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 CERS3Q8IU89 383 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 FAM114A1Q8IWE2 563 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 RETREG2Q8NC44 543 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 GJA10Q969M2 543 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 CAPZA3Q96KX2 299 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 ZNHIT6Q9NWK9 470 aaKnown RBP13.55□□□□□ -0.24
RFC3-201ENST00000380071 SAR1BQ9Y6B6 198 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 TAF1LQ8IZX4 1826 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 ESYT2A0FGR8 921 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 F8W031 263 aaPredicted RBP13.55□□□□□ -0.24
RFC3-201ENST00000380071 ZNF263O14978 683 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 ERLIN1O75477 346 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 CYLC1P35663 651 aaPredicted RBP13.55□□□□□ -0.24
RFC3-201ENST00000380071 GTF2IP78347 998 aa13.55□□□□□ -0.24
RFC3-201ENST00000380071 PAPD7Q5XG87 772 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms