RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 PCDHA6Q9UN73 950 aa17.25■□□□□ 0.35
RPP40-202ENST00000380051 PCDHA8Q9Y5H6 950 aa17.25■□□□□ 0.35
RPP40-202ENST00000380051 KIF28PB7ZC32 967 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 MEIS2O14770 477 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 CA12O43570 354 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 TLR2O60603 784 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 TAL1P17542 331 aaPredicted RBP17.24■□□□□ 0.35
RPP40-202ENST00000380051 CLK2P49760 499 aaKnown RBP17.24■□□□□ 0.35
RPP40-202ENST00000380051 HTRA3P83110 453 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 NR5A1Q13285 461 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 FAM110CQ1W6H9 321 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 FOXD4L5Q5VV16 416 aaPredicted RBP17.24■□□□□ 0.35
RPP40-202ENST00000380051 FERMT3Q86UX7 667 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 NOSTRINQ8IVI9 506 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 ANKRD13CQ8N6S4 541 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 FOXD4L4Q8WXT5 416 aaPredicted RBP17.24■□□□□ 0.35
RPP40-202ENST00000380051 TNFRSF25Q93038 417 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 MROH8Q9H579 483 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 ADGRA2Q96PE1 1338 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 CFBP00751 764 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 FOSP01100 380 aaPredicted RBP17.24■□□□□ 0.35
RPP40-202ENST00000380051 AP3B2Q13367 1082 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 MUM1L1Q5H9M0 696 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 USP17L6PQ6QN14 398 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 KRT25Q7Z3Z0 450 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 NCAPG2Q86XI2 1143 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 HOMER2Q9NSB8 354 aa17.24■□□□□ 0.35
RPP40-202ENST00000380051 BIN2Q9UBW5 565 aaPredicted RBP17.24■□□□□ 0.35
RPP40-202ENST00000380051 CCDC194A0A1B0GVG4 234 aa17.23■□□□□ 0.35
RPP40-202ENST00000380051 NFIBO00712 420 aa17.23■□□□□ 0.35
RPP40-202ENST00000380051 PEX10O60683 326 aa17.23■□□□□ 0.35
RPP40-202ENST00000380051 BCRP11274 1271 aa17.23■□□□□ 0.35
RPP40-202ENST00000380051 ERCC3P19447 782 aa17.23■□□□□ 0.35
RPP40-202ENST00000380051 HSD17B4P51659 736 aa17.23■□□□□ 0.35
RPP40-202ENST00000380051 JAKMIP3Q5VZ66 844 aa17.23■□□□□ 0.35
RPP40-202ENST00000380051 C17orf99Q6UX52 265 aa17.23■□□□□ 0.35
RPP40-202ENST00000380051 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.23■□□□□ 0.35
RPP40-202ENST00000380051 TBC1D5Q92609 795 aa17.23■□□□□ 0.35
RPP40-202ENST00000380051 ADAMTS3O15072 1205 aa17.22■□□□□ 0.35
RPP40-202ENST00000380051 UBE2SQ16763 222 aa17.22■□□□□ 0.35
RPP40-202ENST00000380051 RNF207Q6ZRF8 634 aa17.22■□□□□ 0.35
RPP40-202ENST00000380051 RASGRP4Q8TDF6 673 aa17.22■□□□□ 0.35
RPP40-202ENST00000380051 CPA4Q9UI42 421 aa17.22■□□□□ 0.35
RPP40-202ENST00000380051 SPDYE3A6NKU9 549 aa17.21■□□□□ 0.35
RPP40-202ENST00000380051 CRHR2Q13324 411 aa17.21■□□□□ 0.35
RPP40-202ENST00000380051 NONOQ15233 471 aaKnown RBP eCLIP17.21■□□□□ 0.35
RPP40-202ENST00000380051 MYSM1Q5VVJ2 828 aa17.21■□□□□ 0.35
RPP40-202ENST00000380051 ATL3Q6DD88 541 aa17.21■□□□□ 0.35
RPP40-202ENST00000380051 NSMFQ6X4W1 530 aa17.21■□□□□ 0.35
RPP40-202ENST00000380051 PIK3AP1Q6ZUJ8 805 aa17.21■□□□□ 0.35
RPP40-202ENST00000380051 CCAR1Q8IX12 1150 aaKnown RBP17.21■□□□□ 0.35
RPP40-202ENST00000380051 CFHR5Q9BXR6 569 aa17.21■□□□□ 0.35
RPP40-202ENST00000380051 TMEM260Q9NX78 707 aa17.21■□□□□ 0.35
RPP40-202ENST00000380051 HOXA13P31271 388 aaPredicted RBP17.2■□□□□ 0.34
RPP40-202ENST00000380051 TRAPPC10P48553 1259 aa17.2■□□□□ 0.34
RPP40-202ENST00000380051 RPS6P62753 249 aaKnown RBP17.2■□□□□ 0.34
RPP40-202ENST00000380051 RILPL1Q5EBL4 403 aa17.2■□□□□ 0.34
RPP40-202ENST00000380051 ANKRD35Q8N283 1001 aa17.2■□□□□ 0.34
RPP40-202ENST00000380051 SYTL5Q8TDW5 730 aaPredicted RBP17.2■□□□□ 0.34
RPP40-202ENST00000380051 TNPO1Q92973 898 aaKnown RBP17.2■□□□□ 0.34
RPP40-202ENST00000380051 ZNF396Q96N95 335 aaPredicted RBP17.2■□□□□ 0.34
RPP40-202ENST00000380051 EHMT1Q9H9B1 1298 aa17.2■□□□□ 0.34
RPP40-202ENST00000380051 A1CFQ9NQ94 594 aaKnown RBP17.2■□□□□ 0.34
RPP40-202ENST00000380051 NOL7Q9UMY1 257 aaKnown RBP17.2■□□□□ 0.34
RPP40-202ENST00000380051 PFASO15067 1338 aa17.2■□□□□ 0.34
RPP40-202ENST00000380051 MAPK4P31152 587 aa17.19■□□□□ 0.34
RPP40-202ENST00000380051 BAATQ14032 418 aaPredicted RBP17.19■□□□□ 0.34
RPP40-202ENST00000380051 EARS2Q5JPH6 523 aaKnown RBP17.19■□□□□ 0.34
RPP40-202ENST00000380051 ANO3Q9BYT9 981 aa17.19■□□□□ 0.34
RPP40-202ENST00000380051 PORCNQ9H237 461 aa17.19■□□□□ 0.34
RPP40-202ENST00000380051 CYP39A1Q9NYL5 469 aa17.19■□□□□ 0.34
RPP40-202ENST00000380051 STRNO43815 780 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 FCER1AP12319 257 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 KCTD2Q14681 263 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 FCHSD1Q86WN1 690 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 MMP19Q99542 508 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 EFCC1Q9HA90 598 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 RNF186Q9NXI6 227 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 RBBP6Q7Z6E9 1792 aaKnown RBP17.18■□□□□ 0.34
RPP40-202ENST00000380051 THSD7BQ9C0I4 1608 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 INF2Q27J81 1249 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 NOM1Q5C9Z4 860 aaKnown RBP17.18■□□□□ 0.34
RPP40-202ENST00000380051 WDR78Q5VTH9 848 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 FAM173BQ6P4H8 233 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 SLC30A10Q6XR72 485 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 CLEC17AQ6ZS10 378 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 ABRAQ8N0Z2 381 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 SPDYE1Q8NFV5 336 aaPredicted RBP17.18■□□□□ 0.34
RPP40-202ENST00000380051 TBCKQ8TEA7 893 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 CFAP45Q9UL16 551 aa17.18■□□□□ 0.34
RPP40-202ENST00000380051 FAM205CA6NFA0 338 aa17.17■□□□□ 0.34
RPP40-202ENST00000380051 USP11P51784 963 aa17.17■□□□□ 0.34
RPP40-202ENST00000380051 NEK8Q86SG6 692 aa17.17■□□□□ 0.34
RPP40-202ENST00000380051 PGBD1Q96JS3 809 aa17.17■□□□□ 0.34
RPP40-202ENST00000380051 NAP1L4Q99733 375 aaKnown RBP17.17■□□□□ 0.34
RPP40-202ENST00000380051 COL20A1Q9P218 1284 aa17.17■□□□□ 0.34
RPP40-202ENST00000380051 IVNS1ABPQ9Y6Y0 642 aa17.17■□□□□ 0.34
RPP40-202ENST00000380051 POTEB2H3BUK9 544 aa17.16■□□□□ 0.34
RPP40-202ENST00000380051 SREBF1P36956 1147 aa17.16■□□□□ 0.34
RPP40-202ENST00000380051 TOB1P50616 345 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms