RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 SMARCAL1Q9NZC9 954 aa17.5■□□□□ 0.39
BRF1-203ENST00000379937 SHMT1P34896 483 aa17.5■□□□□ 0.39
BRF1-203ENST00000379937 TBC1D8BQ0IIM8 1120 aa17.5■□□□□ 0.39
BRF1-203ENST00000379937 C16orf86Q6ZW13 317 aa17.5■□□□□ 0.39
BRF1-203ENST00000379937 CCDC148Q8NFR7 591 aa17.5■□□□□ 0.39
BRF1-203ENST00000379937 FERMT2Q96AC1 680 aa17.5■□□□□ 0.39
BRF1-203ENST00000379937 MKI67P46013 3256 aaKnown RBP17.49■□□□□ 0.39
BRF1-203ENST00000379937 PALM3A6NDB9 673 aaPredicted RBP17.49■□□□□ 0.39
BRF1-203ENST00000379937 CAVIN2O95810 425 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 TTLL1O95922 423 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 TNFRSF25Q93038 417 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 AKT1S1Q96B36 256 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 ASTN2O75129 1339 aaPredicted RBP17.49■□□□□ 0.39
BRF1-203ENST00000379937 CASQ1P31415 396 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 SYCP1Q15431 976 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 ANKRD40Q6AI12 368 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 FBXO38Q6PIJ6 1188 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 CCDC150Q8NCX0 1101 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 UBXN4Q92575 508 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 CALML4Q96GE6 196 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 OSBPL5Q9H0X9 879 aaPredicted RBP17.49■□□□□ 0.39
BRF1-203ENST00000379937 DACH1Q9UI36 760 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 F5H6K3 240 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 KLRC3Q07444 240 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 SPATA1Q5VX52 437 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 FAM84AQ96KN4 292 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 PDCL3Q9H2J4 239 aa17.49■□□□□ 0.39
BRF1-203ENST00000379937 DDX25Q9UHL0 483 aaKnown RBP17.49■□□□□ 0.39
BRF1-203ENST00000379937 ABCA3Q99758 1704 aa17.48■□□□□ 0.39
BRF1-203ENST00000379937 CLIC2O15247 247 aa17.48■□□□□ 0.39
BRF1-203ENST00000379937 PNMA6AP0CW24 399 aaPredicted RBP17.48■□□□□ 0.39
BRF1-203ENST00000379937 GNA11P29992 359 aa17.48■□□□□ 0.39
BRF1-203ENST00000379937 PSMC6P62333 389 aa17.48■□□□□ 0.39
BRF1-203ENST00000379937 FAM193AP78312 1265 aa17.48■□□□□ 0.39
BRF1-203ENST00000379937 TIGD1Q96MW7 591 aa17.48■□□□□ 0.39
BRF1-203ENST00000379937 SUGCTQ9HAC7 445 aa17.48■□□□□ 0.39
BRF1-203ENST00000379937 ZCCHC17Q9NP64 241 aaKnown RBP17.48■□□□□ 0.39
BRF1-203ENST00000379937 SAMM50Q9Y512 469 aa17.48■□□□□ 0.39
BRF1-203ENST00000379937 RXRBP28702 533 aa17.48■□□□□ 0.39
BRF1-203ENST00000379937 NBPF9Q3BBW0 867 aa17.48■□□□□ 0.39
BRF1-203ENST00000379937 SBK1Q52WX2 424 aa17.48■□□□□ 0.39
BRF1-203ENST00000379937 HERC4Q5GLZ8 1057 aaPredicted RBP17.48■□□□□ 0.39
BRF1-203ENST00000379937 SH3BP5LQ7L8J4 393 aa17.48■□□□□ 0.39
BRF1-203ENST00000379937 ANKRD20A12PQ8NF67 263 aa17.48■□□□□ 0.39
BRF1-203ENST00000379937 TMEM150BA6NC51 233 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 TRAF5O00463 557 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 COPB1P53618 953 aaKnown RBP17.47■□□□□ 0.39
BRF1-203ENST00000379937 CDC37Q16543 378 aaPredicted RBP17.47■□□□□ 0.39
BRF1-203ENST00000379937 TDRD12Q587J7 1177 aaKnown RBP17.47■□□□□ 0.39
BRF1-203ENST00000379937 FAM83BQ5T0W9 1011 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 NOC4LQ9BVI4 516 aaKnown RBP17.47■□□□□ 0.39
BRF1-203ENST00000379937 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.47■□□□□ 0.393e-6■□□□□ 9.8
BRF1-203ENST00000379937 PCDHA12Q9UN75 941 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 MYH3P11055 1940 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 GYPCP04921 128 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 TPM1P09493 284 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 GNAQP50148 359 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 CTTNQ14247 550 aaKnown RBP17.47■□□□□ 0.39
BRF1-203ENST00000379937 PDXDC2PQ6P474 469 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 A0A1W2PRG0 241 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 TTC26A0AVF1 554 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 MYMKA6NI61 221 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 IKBKBO14920 756 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 ABCB5Q2M3G0 1257 aa17.47■□□□□ 0.39
BRF1-203ENST00000379937 NPR1P16066 1061 aa17.46■□□□□ 0.39
BRF1-203ENST00000379937 CDR1P51861 262 aa17.46■□□□□ 0.39
BRF1-203ENST00000379937 TSR1Q2NL82 804 aaKnown RBP17.46■□□□□ 0.39
BRF1-203ENST00000379937 SAMD7Q7Z3H4 446 aa17.46■□□□□ 0.39
BRF1-203ENST00000379937 TPH2Q8IWU9 490 aa17.46■□□□□ 0.39
BRF1-203ENST00000379937 SP8Q8IXZ3 490 aa17.46■□□□□ 0.39
BRF1-203ENST00000379937 ENOX1Q8TC92 643 aaKnown RBP17.46■□□□□ 0.39
BRF1-203ENST00000379937 RABEP2Q9H5N1 569 aa17.46■□□□□ 0.39
BRF1-203ENST00000379937 DCAF17Q5H9S7 520 aaPredicted RBP17.46■□□□□ 0.39
BRF1-203ENST00000379937 KRT79Q5XKE5 535 aa17.46■□□□□ 0.39
BRF1-203ENST00000379937 KANK3Q6NY19 840 aa17.46■□□□□ 0.39
BRF1-203ENST00000379937 MASTLQ96GX5 879 aa17.46■□□□□ 0.39
BRF1-203ENST00000379937 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.46■□□□□ 0.39
BRF1-203ENST00000379937 COA1Q9GZY4 146 aa17.46■□□□□ 0.39
BRF1-203ENST00000379937 ZMYND15Q9H091 742 aa17.46■□□□□ 0.39
BRF1-203ENST00000379937 FAM198AQ9UFP1 575 aa17.46■□□□□ 0.39
BRF1-203ENST00000379937 USP20Q9Y2K6 914 aa17.46■□□□□ 0.39
BRF1-203ENST00000379937 PSMA7O14818 248 aa17.46■□□□□ 0.38
BRF1-203ENST00000379937 SLU7O95391 586 aaKnown RBP17.46■□□□□ 0.38
BRF1-203ENST00000379937 PLCG2P16885 1265 aa17.46■□□□□ 0.38
BRF1-203ENST00000379937 CRY2Q49AN0 593 aa17.46■□□□□ 0.38
BRF1-203ENST00000379937 KIAA1328Q86T90 577 aa17.46■□□□□ 0.38
BRF1-203ENST00000379937 SLF2Q8IX21 1173 aa17.46■□□□□ 0.38
BRF1-203ENST00000379937 OGFOD1Q8N543 542 aa17.46■□□□□ 0.38
BRF1-203ENST00000379937 DDX12PQ92771 950 aa17.46■□□□□ 0.38
BRF1-203ENST00000379937 GOLPH3Q9H4A6 298 aa17.46■□□□□ 0.38
BRF1-203ENST00000379937 DEF6Q9H4E7 631 aa17.46■□□□□ 0.38
BRF1-203ENST00000379937 RSPH10B2B2RC85 870 aa17.45■□□□□ 0.38
BRF1-203ENST00000379937 RSPH10BP0C881 870 aa17.45■□□□□ 0.38
BRF1-203ENST00000379937 ALDH1B1P30837 517 aa17.45■□□□□ 0.38
BRF1-203ENST00000379937 TBC1D22AQ8WUA7 517 aa17.45■□□□□ 0.38
BRF1-203ENST00000379937 NHSL1Q5SYE7 1610 aa17.45■□□□□ 0.38
BRF1-203ENST00000379937 IL1R1P14778 569 aa17.45■□□□□ 0.38
BRF1-203ENST00000379937 PDE6BP35913 854 aa17.45■□□□□ 0.38
BRF1-203ENST00000379937 CHMP4BP1P59074 171 aa17.45■□□□□ 0.38
BRF1-203ENST00000379937 ETF1P62495 437 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms