RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 MMS22LQ6ZRQ5 1243 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 TBC1D22AQ8WUA7 517 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 NAA15Q9BXJ9 866 aaKnown RBP15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 GBP3Q9H0R5 595 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 USP40Q9NVE5 1235 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 PSMD14O00487 310 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 MMP1P03956 469 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 ERCC5P28715 1186 aaPredicted RBP15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 PRELPP51888 382 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 MNAT1P51948 309 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 C2orf54Q08AI8 447 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 CPLX2Q6PUV4 134 aaKnown RBP15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 COG1Q8WTW3 980 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 SHISA4Q96DD7 197 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 PAGE5Q96GU1 130 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 SELENOOQ9BVL4 669 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 BRMS1Q9HCU9 246 aa15.5■□□□□ 0.07
SNCAIP-203ENST00000379538 TNKSO95271 1327 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 A0A087WUV0 522 aaPredicted RBP15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 RCCD1A6NED2 376 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 CDKL5O76039 1030 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 CRKP46108 304 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 GSTO1P78417 241 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 DALRD3Q5D0E6 543 aaKnown RBP15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 CDC42EP5Q6NZY7 148 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 TRAPPC11Q7Z392 1133 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 CNGA4Q8IV77 575 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 SPATA20Q8TB22 786 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 BCAS4Q8TDM0 211 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 SECISBP2LQ93073 1101 aaKnown RBP15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 ATP8A2Q9NTI2 1148 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 SMARCAL1Q9NZC9 954 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 VPS54Q9P1Q0 977 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 SLC12A7Q9Y666 1083 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 HNRNPH1P31943 449 aaKnown RBP15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 AARSP49588 968 aaKnown RBP eCLIP15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 C12orf60Q5U649 245 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 ENAHQ8N8S7 591 aaPredicted RBP15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 PSMB7Q99436 277 aa15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 TDRD3Q9H7E2 651 aaKnown RBP15.49■□□□□ 0.07
SNCAIP-203ENST00000379538 LDHCP07864 332 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 MATR3P43243 847 aaKnown RBP eCLIP15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 KCTD19Q17RG1 926 aaPredicted RBP15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 FILIP1LQ4L180 1135 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 TMTC1Q8IUR5 882 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 MSL3Q8N5Y2 521 aaKnown RBP15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 SYMPKQ92797 1274 aaKnown RBP15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 CRACR2AQ9BSW2 395 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 LACRTQ9GZZ8 138 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 EPN1Q9Y6I3 576 aaPredicted RBP15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 CLRN2A0PK11 232 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 GOLGA6CA6NDK9 693 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 NFKBIEO00221 500 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 NDUFA10O95299 355 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 GOLGA6DP0CG33 693 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 PPP4CP60510 307 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 SLC7A5Q01650 507 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 MCTP2Q6DN12 878 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 PRMT6Q96LA8 375 aaPredicted RBP15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 UBAC1Q9BSL1 405 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 KRT23Q9C075 422 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 ACBD3Q9H3P7 528 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 GOLGA6AQ9NYA3 693 aa15.48■□□□□ 0.07
SNCAIP-203ENST00000379538 TTC26A0AVF1 554 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 TSPY2A6NKD2 308 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 MYO1FO00160 1098 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 EIF6P56537 245 aaKnown RBP15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 TFAP4Q01664 338 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 WTAPQ15007 396 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 CCDC122Q5T0U0 273 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 STRIP1Q5VSL9 837 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 CYP26C1Q6V0L0 522 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 FAM76AQ8TAV0 307 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 SMCR8Q8TEV9 937 aaPredicted RBP15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 SRPRBQ9Y5M8 271 aaKnown RBP15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 GAKO14976 1311 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 TRIM49BA6NDI0 452 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 EGFRP00533 1210 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 HERVK_113P62684 666 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 CYP27A1Q02318 531 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 ESR2Q92731 530 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 TEKT1Q969V4 418 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 MKNK2Q9HBH9 465 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 IL17RBQ9NRM6 502 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 EHD2Q9NZN4 543 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 SAR1BQ9Y6B6 198 aa15.47■□□□□ 0.07
SNCAIP-203ENST00000379538 MACROD2A1Z1Q3 448 aa15.46■□□□□ 0.07
SNCAIP-203ENST00000379538 GNGT1P63211 74 aa15.46■□□□□ 0.07
SNCAIP-203ENST00000379538 UBXN1Q04323 297 aa15.46■□□□□ 0.07
SNCAIP-203ENST00000379538 SAFBQ15424 915 aaKnown RBP eCLIP15.46■□□□□ 0.07
SNCAIP-203ENST00000379538 CT47A1Q5JQC4 288 aaPredicted RBP15.46■□□□□ 0.07
SNCAIP-203ENST00000379538 RBM26Q5T8P6 1007 aaKnown RBP15.46■□□□□ 0.07
SNCAIP-203ENST00000379538 RRAGBQ5VZM2 374 aa15.46■□□□□ 0.07
SNCAIP-203ENST00000379538 KCTD16Q68DU8 428 aa15.46■□□□□ 0.07
SNCAIP-203ENST00000379538 SND1Q7KZF4 910 aaKnown RBP eCLIP15.46■□□□□ 0.07
SNCAIP-203ENST00000379538 CDAN1Q8IWY9 1227 aa15.46■□□□□ 0.07
SNCAIP-203ENST00000379538 CAGE1Q8TC20 777 aa15.46■□□□□ 0.07
SNCAIP-203ENST00000379538 DMGDHQ9UI17 866 aaKnown RBP15.46■□□□□ 0.07
SNCAIP-203ENST00000379538 ANAPC4Q9UJX5 808 aa15.46■□□□□ 0.07
SNCAIP-203ENST00000379538 EBAG9O00559 213 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms