RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 CTNND2Q9UQB3 1225 aa16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 R3HCC1Q9Y3T6 440 aaKnown RBP16.65■□□□□ 0.26
RAB3IP-203ENST00000378809 STAT2P52630 851 aa16.64■□□□□ 0.25
RAB3IP-203ENST00000378809 CT47A1Q5JQC4 288 aaPredicted RBP16.64■□□□□ 0.25
RAB3IP-203ENST00000378809 IGSF22Q8N9C0 903 aa16.64■□□□□ 0.25
RAB3IP-203ENST00000378809 MED15Q96RN5 788 aa16.64■□□□□ 0.25
RAB3IP-203ENST00000378809 UTRNP46939 3433 aa16.64■□□□□ 0.25
RAB3IP-203ENST00000378809 PPP1R3GB7ZBB8 358 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 SKILP12757 684 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 PPP4R3AQ6IN85 833 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 CDK5RAP3Q96JB5 506 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 CUEDC2Q9H467 287 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 SPTLC3Q9NUV7 552 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 EDIL3O43854 480 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 COBLO75128 1261 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 ZNF18P17022 549 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 DHX8Q14562 1220 aaKnown RBP16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 PTPN21Q16825 1174 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 FAM83BQ5T0W9 1011 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 ZNF658Q5TYW1 1059 aaPredicted RBP16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 SPATA1Q5VX52 437 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 ANO3Q9BYT9 981 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 SYNPO2Q9UMS6 1093 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 MAPK8IP1Q9UQF2 711 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 TMX2Q9Y320 296 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 GJA3Q9Y6H8 435 aa16.63■□□□□ 0.25
RAB3IP-203ENST00000378809 POTEMA6NI47 508 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 TAL1P17542 331 aaPredicted RBP16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 SFPQP23246 707 aaKnown RBP eCLIP16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 FXR2P51116 673 aaKnown RBP eCLIP16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 RASSF7Q02833 373 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 CCDC150Q8NCX0 1101 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 LRRC15Q8TF66 581 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 MAGEF1Q9HAY2 307 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 KBTBD4Q9NVX7 518 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 PRR12Q9ULL5 1215 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 GDAQ9Y2T3 454 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 TBC1D12O60347 775 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 MYL1P05976 194 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 GCFC2P16383 781 aaKnown RBP16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 CAP2P40123 477 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 RASA3Q14644 834 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 KIAA1755Q5JYT7 1200 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 GJA10Q969M2 543 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 ZBED3Q96IU2 234 aaPredicted RBP16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 UIMC1Q96RL1 719 aa16.62■□□□□ 0.25
RAB3IP-203ENST00000378809 SPDYE3A6NKU9 549 aa16.61■□□□□ 0.25
RAB3IP-203ENST00000378809 MEIS2O14770 477 aa16.61■□□□□ 0.25
RAB3IP-203ENST00000378809 EGFRP00533 1210 aa16.61■□□□□ 0.25
RAB3IP-203ENST00000378809 PAK1Q13153 545 aa16.61■□□□□ 0.25
RAB3IP-203ENST00000378809 KMT5BQ4FZB7 885 aa16.61■□□□□ 0.25
RAB3IP-203ENST00000378809 KRT79Q5XKE5 535 aa16.61■□□□□ 0.25
RAB3IP-203ENST00000378809 BTNL9Q6UXG8 535 aa16.61■□□□□ 0.25
RAB3IP-203ENST00000378809 SNX29Q8TEQ0 813 aa16.61■□□□□ 0.25
RAB3IP-203ENST00000378809 KIFC2Q96AC6 838 aa16.61■□□□□ 0.25
RAB3IP-203ENST00000378809 NAP1L4Q99733 375 aaKnown RBP16.61■□□□□ 0.25
RAB3IP-203ENST00000378809 MMTAG2Q9BU76 263 aaKnown RBP16.61■□□□□ 0.25
RAB3IP-203ENST00000378809 AP3B2Q13367 1082 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 CCDC84Q86UT8 332 aaPredicted RBP16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 VSTM4Q8IW00 320 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 NELFBQ8WX92 580 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 SH2D4AQ9H788 454 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 CD2APQ9Y5K6 639 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 NRDCO43847 1150 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 ASIC1P78348 528 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 CCZ1BP86790 482 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 CCZ1P86791 482 aaPredicted RBP16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 AMPD3Q01432 767 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 TNFAIP1Q13829 316 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 ARMCX5Q6P1M9 558 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 CCDC174Q6PII3 467 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 MICALL2Q8IY33 904 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 CCDC47Q96A33 483 aaKnown RBP16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 FEZ1Q99689 392 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 INTS13Q9NVM9 706 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 RWDD2AQ9UIY3 292 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 PCDHA12Q9UN75 941 aa16.6■□□□□ 0.25
RAB3IP-203ENST00000378809 PSDA5PKW4 1024 aaPredicted RBP16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 ASNSP08243 561 aa16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 RPS12P25398 132 aaKnown RBP16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 HOXA13P31271 388 aaPredicted RBP16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 PRCPP42785 496 aa16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 GMPSP49915 693 aaPredicted RBP16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 PDIA5Q14554 519 aa16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 TBC1D10BQ4KMP7 808 aaPredicted RBP16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 SAMD7Q7Z3H4 446 aa16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 CREBRFQ8IUR6 639 aa16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 HAS1Q92839 578 aa16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 GLIS2Q9BZE0 524 aaPredicted RBP16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 TRIM9Q9C026 710 aa16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 VCPKMTQ9H867 229 aa16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 ARFGEF1Q9Y6D6 1849 aa16.59■□□□□ 0.25
RAB3IP-203ENST00000378809 USP11P51784 963 aa16.58■□□□□ 0.25
RAB3IP-203ENST00000378809 ARHGAP4P98171 946 aa16.58■□□□□ 0.25
RAB3IP-203ENST00000378809 GRB10Q13322 594 aa16.58■□□□□ 0.25
RAB3IP-203ENST00000378809 STIM1Q13586 685 aa16.58■□□□□ 0.25
RAB3IP-203ENST00000378809 KCNB1Q14721 858 aa16.58■□□□□ 0.25
RAB3IP-203ENST00000378809 SV2BQ7L1I2 683 aa16.58■□□□□ 0.25
RAB3IP-203ENST00000378809 EXOC1Q9NV70 894 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms