RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 FOSP01100 380 aaPredicted RBP14.58□□□□□ -0.08
NPHP4-203ENST00000378169 STRN3Q13033 797 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 NKX1-1Q15270 411 aaPredicted RBP14.58□□□□□ -0.08
NPHP4-203ENST00000378169 XKR9Q5GH70 373 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 ODR4Q5SWX8 454 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 DISC1Q9NRI5 854 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 RABGAP1Q9Y3P9 1069 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 COL4A3BPQ9Y5P4 624 aa14.58□□□□□ -0.08
NPHP4-203ENST00000378169 POTEMA6NI47 508 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 USP17L15C9J2P7 530 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 USP17L13C9JLJ4 530 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 USP17L11C9JVI0 530 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 USP17L18D6R9N7 530 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 USP17L22D6RA61 530 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 USP17L17D6RBQ6 530 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 USP17L19D6RCP7 530 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 USP17L20D6RJB6 530 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 PRR29P0C7W0 189 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 NR2F2P24468 414 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 STAT1P42224 750 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 USP17L24Q0WX57 530 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 ARHGEF16Q5VV41 709 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 USP17L6PQ6QN14 398 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 VSTM4Q8IW00 320 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 ACRBPQ8NEB7 543 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 U2AF1L4Q8WU68 220 aaKnown RBP14.57□□□□□ -0.08
NPHP4-203ENST00000378169 DHX36Q9H2U1 1008 aaKnown RBP14.57□□□□□ -0.08
NPHP4-203ENST00000378169 PPP1R7Q15435 360 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 KMT5BQ4FZB7 885 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 FAM102BQ5T8I3 360 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 SLC35F6Q8N357 371 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 UBLCP1Q8WVY7 318 aaPredicted RBP14.57□□□□□ -0.08
NPHP4-203ENST00000378169 PAIP2Q9BPZ3 127 aaKnown RBP14.57□□□□□ -0.08
NPHP4-203ENST00000378169 DNAI2Q9GZS0 605 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 CEP83Q9Y592 693 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 PNPLA7Q6ZV29 1317 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 STK36Q9NRP7 1315 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 SF3B3Q15393 1217 aaKnown RBP14.57□□□□□ -0.08
NPHP4-203ENST00000378169 CDC37Q16543 378 aaPredicted RBP14.57□□□□□ -0.08
NPHP4-203ENST00000378169 PEX26Q7Z412 305 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 VTI1AQ96AJ9 217 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 HAUS4Q9H6D7 363 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 MYO1AQ9UBC5 1043 aa14.57□□□□□ -0.08
NPHP4-203ENST00000378169 IRX3P78415 501 aaPredicted RBP14.56□□□□□ -0.08
NPHP4-203ENST00000378169 RPS6KA1Q15418 735 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 TXNRD1Q16881 649 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 CLEC10AQ8IUN9 316 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 SRBD1Q8N5C6 995 aaKnown RBP14.56□□□□□ -0.08
NPHP4-203ENST00000378169 GLG1Q92896 1179 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 MASTLQ96GX5 879 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 CCDC114Q96M63 670 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 UBE2Q2LH0YL09 131 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 K7ENM7 598 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 TNNI1P19237 187 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 SND1Q7KZF4 910 aaKnown RBP eCLIP14.56□□□□□ -0.08
NPHP4-203ENST00000378169 CUEDC2Q9H467 287 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 EXOC7Q9UPT5 735 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 ATF5Q9Y2D1 282 aaPredicted RBP14.56□□□□□ -0.08
NPHP4-203ENST00000378169 TRIM49BA6NDI0 452 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 CRKP46108 304 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 CYP27A1Q02318 531 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 MROH7-TTC4A0A0A0MT08 1334 aa14.56□□□□□ -0.08
NPHP4-203ENST00000378169 CLIC2O15247 247 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 HPDP32754 393 aaPredicted RBP14.55□□□□□ -0.08
NPHP4-203ENST00000378169 FKBP3Q00688 224 aaKnown RBP14.55□□□□□ -0.08
NPHP4-203ENST00000378169 SEPT2Q15019 361 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 ARL6IP4Q66PJ3 421 aaKnown RBP14.55□□□□□ -0.08
NPHP4-203ENST00000378169 USP49Q70CQ1 688 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 DHTKD1Q96HY7 919 aaPredicted RBP14.55□□□□□ -0.08
NPHP4-203ENST00000378169 STK24Q9Y6E0 443 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 GNA14O95837 355 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 EEF1GP26641 437 aaKnown RBP14.55□□□□□ -0.08
NPHP4-203ENST00000378169 BBXQ8WY36 941 aaPredicted RBP14.55□□□□□ -0.08
NPHP4-203ENST00000378169 TMEM260Q9NX78 707 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 MTUS1Q9ULD2 1270 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 A0A1W2PRG0 241 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 DDIT3P35638 169 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 CALCOCO2Q13137 446 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 TUBB2AQ13885 445 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 KRT31Q15323 416 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 DAAM2Q86T65 1068 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 TUBB2BQ9BVA1 445 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 PNMA6FA0A0J9YX94 578 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 BCRP11274 1271 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 KLRK1P26718 216 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 STAT2P52630 851 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 SEL1L2Q5TEA6 688 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 KIFAP3Q92845 792 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 SELENOSQ9BQE4 189 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 TEKT3Q9BXF9 490 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 AZI2Q9H6S1 392 aa14.55□□□□□ -0.08
NPHP4-203ENST00000378169 KDM6AO15550 1401 aaPredicted RBP14.55□□□□□ -0.08
NPHP4-203ENST00000378169 DKC1O60832 514 aaKnown RBP eCLIP14.54□□□□□ -0.081e-6■■■■■ 42.6
NPHP4-203ENST00000378169 DLATP10515 647 aaKnown RBP14.54□□□□□ -0.08
NPHP4-203ENST00000378169 CCNE1P24864 410 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 CFAP221Q4G0U5 840 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 C12orf60Q5U649 245 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 ANKRD35Q8N283 1001 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 TRIM58Q8NG06 486 aa14.54□□□□□ -0.08
NPHP4-203ENST00000378169 GCFC2P16383 781 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms