RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 EPSTI1Q96J88 318 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 PLEKHA4Q9H4M7 779 aa9.64□□□□□ -0.87
PCDH9-202ENST00000377865 USP17L12C9JPN9 530 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 USP17L21D6R901 530 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 H2AFZP0C0S5 128 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 EIF4A3P38919 411 aaKnown RBP9.63□□□□□ -0.87
PCDH9-202ENST00000377865 LRRC63Q05C16 580 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 NR1I3Q14994 352 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 ZNF365Q70YC5 407 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 H2AFVQ71UI9 128 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 SPATA24Q86W54 205 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 VSIG1Q86XK7 387 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 CCDC63Q8NA47 563 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 CCHCR1Q8TD31 782 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 SLC39A2Q9NP94 309 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 GPHNQ9NQX3 736 aaPredicted RBP9.63□□□□□ -0.87
PCDH9-202ENST00000377865 KLHL14Q9P2G3 628 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 TMEM131LA2VDJ0 1609 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 DRP2Q13474 957 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 NELFCDQ8IXH7 590 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 CCDC105Q8IYK2 499 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 SLFN12Q8IYM2 578 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 FERMT1Q9BQL6 677 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 PIH1D3Q9NQM4 214 aaKnown RBP9.63□□□□□ -0.87
PCDH9-202ENST00000377865 SAP30BPQ9UHR5 308 aaKnown RBP9.63□□□□□ -0.87
PCDH9-202ENST00000377865 FBXO2Q9UK22 296 aaPredicted RBP9.63□□□□□ -0.87
PCDH9-202ENST00000377865 DIS3Q9Y2L1 958 aaKnown RBP9.63□□□□□ -0.87
PCDH9-202ENST00000377865 LMNB1P20700 586 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 PLA2G4AP47712 749 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 SH3BGRP55822 239 aaPredicted RBP9.63□□□□□ -0.87
PCDH9-202ENST00000377865 BIRC3Q13489 604 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 LIN9Q5TKA1 542 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 SDR42E1Q8WUS8 393 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 STRBPQ96SI9 672 aaKnown RBP9.63□□□□□ -0.87
PCDH9-202ENST00000377865 TYW1Q9NV66 732 aaKnown RBP9.63□□□□□ -0.87
PCDH9-202ENST00000377865 N4BP1O75113 896 aaKnown RBP9.63□□□□□ -0.87
PCDH9-202ENST00000377865 NEBLO76041 1014 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 FERP16591 822 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 PICALMQ13492 652 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 GPBP1Q86WP2 473 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 REXO1L1PQ8IX06 675 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 TC2NQ8N9U0 490 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 LARP4BQ92615 738 aaKnown RBP9.63□□□□□ -0.87
PCDH9-202ENST00000377865 P3H4Q92791 437 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 ERBB3P21860 1342 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 EHHADHQ08426 723 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 ARMCX3Q9UH62 379 aaPredicted RBP9.63□□□□□ -0.87
PCDH9-202ENST00000377865 ASIC3Q9UHC3 531 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 EXOC7Q9UPT5 735 aa9.63□□□□□ -0.87
PCDH9-202ENST00000377865 HSPA6P17066 643 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 FAM26FQ5R3K3 315 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 BBOF1Q8ND07 529 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.62□□□□□ -0.87
PCDH9-202ENST00000377865 ZCCHC17Q9NP64 241 aaKnown RBP9.62□□□□□ -0.87
PCDH9-202ENST00000377865 GPCPD1Q9NPB8 672 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 BIN2Q9UBW5 565 aaPredicted RBP9.62□□□□□ -0.87
PCDH9-202ENST00000377865 COBLO75128 1261 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 SUN1O94901 812 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 STX2P32856 288 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 GPKOWQ92917 476 aaPredicted RBP eCLIP9.62□□□□□ -0.87
PCDH9-202ENST00000377865 SPZ1Q9BXG8 430 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 COL4A3BPQ9Y5P4 624 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 CHUKO15111 745 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 MAN1A1P33908 653 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 VSNL1P62760 191 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 LCORLQ8N3X6 602 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 CALR3Q96L12 384 aaKnown RBP9.62□□□□□ -0.87
PCDH9-202ENST00000377865 MRPL44Q9H9J2 332 aaKnown RBP9.62□□□□□ -0.87
PCDH9-202ENST00000377865 ODF2LQ9ULJ1 636 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 CAPN11Q9UMQ6 739 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 TECPR2O15040 1411 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 CEMIPQ8WUJ3 1361 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 CCDC188H7C350 402 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 CTDNEP1O95476 244 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 GAS8O95995 478 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 RFC4P35249 363 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 BCAMP50895 628 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 ORC2Q13416 577 aaPredicted RBP9.62□□□□□ -0.87
PCDH9-202ENST00000377865 CUL4BQ13620 913 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 RPAINQ86UA6 219 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 MROH7-TTC4A0A0A0MT08 1334 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 SOS2Q07890 1332 aaPredicted RBP9.62□□□□□ -0.87
PCDH9-202ENST00000377865 PASKQ96RG2 1323 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 CDHR2Q9BYE9 1310 aa9.62□□□□□ -0.87
PCDH9-202ENST00000377865 GCNT3O95395 438 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 CDC27P30260 824 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 MCAMP43121 646 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 HHATQ5VTY9 493 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.61□□□□□ -0.87
PCDH9-202ENST00000377865 EPC1Q9H2F5 836 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 TBC1D7Q9P0N9 293 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 TEX33O43247 280 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 HIP1RO75146 1068 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 TBC1D8O95759 1140 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 SLMAPQ14BN4 828 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 CCDC62Q6P9F0 684 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 MSANTD4Q8NCY6 345 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 TSNARE1Q96NA8 513 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 IMPG2Q9BZV3 1241 aa9.61□□□□□ -0.87
PCDH9-202ENST00000377865 NDST4Q9H3R1 872 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms