RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 SH2B2O14492 632 aaPredicted RBP13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 ZBTB5O15062 677 aa13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 IRX5P78411 483 aaPredicted RBP13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 KCNA10Q16322 511 aa13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 TLK2Q86UE8 772 aa13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 MCF2L2Q86YR7 1114 aa13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 RAB11FIP4Q86YS3 637 aa13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 IGDCC4Q8TDY8 1250 aa13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 PIGSQ96S52 555 aa13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 AP5M1Q9H0R1 490 aa13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 VTA1Q9NP79 307 aa13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 STARD7Q9NQZ5 370 aa13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 LCTP09848 1927 aa13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 MYH6P13533 1939 aa13.44□□□□□ -0.26
SMARCE1-203ENST00000377808 MOXD2PA6NHM9 499 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 B4DLN1 442 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 PQBP1O60828 265 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 DDAH1O94760 285 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 CFBP00751 764 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 SMPD1P17405 629 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 RXRAP19793 462 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 PTGS1P23219 599 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 MAGEA10P43363 369 aaPredicted RBP13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 MRPL12P52815 198 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 ACLYP53396 1101 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 MDM2Q00987 491 aaPredicted RBP13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 BEX3Q00994 111 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 TROAPQ12815 778 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 GNASQ5JWF2 1037 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 PCSK9Q8NBP7 692 aaKnown RBP13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 TBC1D5Q92609 795 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 TMEM87BQ96K49 555 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 LBHD1Q9BQE6 289 aaPredicted RBP13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 PPP4R2Q9NY27 417 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 PCDHA1Q9Y5I3 950 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 LRRC37A2A6NM11 1700 aa13.43□□□□□ -0.26
SMARCE1-203ENST00000377808 CEP290O15078 2479 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 DYNC1LI2O43237 492 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 ASGR1P07306 291 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 KIF5BP33176 963 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 GJA9P57773 515 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 COL9A3Q14050 684 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 ARHGEF16Q5VV41 709 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 IQSEC1Q6DN90 963 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 TAPT1Q6NXT6 567 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 KLHDC9Q8NEP7 349 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 DNERQ8NFT8 737 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 SYTL5Q8TDW5 730 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 TCEANC2Q96MN5 208 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 GLT1D1Q96MS3 346 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 NEK1Q96PY6 1258 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 TSEN34Q9BSV6 310 aaKnown RBP13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 WDR11Q9BZH6 1224 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 SLC12A7Q9Y666 1083 aa13.42□□□□□ -0.26
SMARCE1-203ENST00000377808 ZEB2O60315 1214 aa13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 PPP1R11O60927 126 aaPredicted RBP13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 EIF2AK2P19525 551 aaKnown RBP13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 FGD1P98174 961 aa13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 FSCN1Q16658 493 aaKnown RBP13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 SYNE3Q6ZMZ3 975 aa13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 MICU3Q86XE3 530 aa13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 TMTC2Q8N394 836 aa13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 RGS22Q8NE09 1264 aa13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 MORC4Q8TE76 937 aa13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 TAAR1Q96RJ0 339 aa13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 RMDN3Q96TC7 470 aa13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 MTA3Q9BTC8 594 aa13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 UBE2OQ9C0C9 1292 aaKnown RBP13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 UPF3AQ9H1J1 476 aaKnown RBP13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 SEC63Q9UGP8 760 aaKnown RBP13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 GNEQ9Y223 722 aaKnown RBP13.41□□□□□ -0.26
SMARCE1-203ENST00000377808 LOC102724159A0A0B4J2E5 919 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 PNMA6FA0A0J9YX94 578 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 CYTH3O43739 400 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 PLEKHA8P1O95397 391 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 CALM1P0DP23 149 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 CALM2P0DP24 149 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 CALM3P0DP25 149 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 CST5P28325 142 aaPredicted RBP13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 HOXA13P31271 388 aaPredicted RBP13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 TLE2Q04725 743 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 TRAF1Q13077 416 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 KRT32Q14532 448 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 PPP2R5BQ15173 497 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 PWP2Q15269 919 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 SLC35G1Q2M3R5 365 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 TMEM63BQ5T3F8 832 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 RASEFQ8IZ41 740 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 CMTR1Q8N1G2 835 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 CCDC82Q8N4S0 544 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 OR6J1Q8NGC5 347 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 NSUN6Q8TEA1 469 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 MTMR8Q96EF0 704 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 RRP36Q96EU6 259 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 COL20A1Q9P218 1284 aa13.4□□□□□ -0.26
SMARCE1-203ENST00000377808 REC8O95072 547 aa13.39□□□□□ -0.27
SMARCE1-203ENST00000377808 LIFRP42702 1097 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms