RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 ASPRV1Q53RT3 343 aa20.9■□□□□ 0.94
COMMD6-202ENST00000377612 CCDC178Q5BJE1 867 aa20.9■□□□□ 0.94
COMMD6-202ENST00000377612 GNASQ5JWF2 1037 aa20.9■□□□□ 0.94
COMMD6-202ENST00000377612 RNF207Q6ZRF8 634 aa20.9■□□□□ 0.94
COMMD6-202ENST00000377612 STAG2Q8N3U4 1231 aa20.9■□□□□ 0.94
COMMD6-202ENST00000377612 ELP1O95163 1332 aa20.89■□□□□ 0.93
COMMD6-202ENST00000377612 EDNRBP24530 442 aa20.89■□□□□ 0.93
COMMD6-202ENST00000377612 CDK7P50613 346 aa20.89■□□□□ 0.93
COMMD6-202ENST00000377612 QRICH1Q2TAL8 776 aa20.89■□□□□ 0.93
COMMD6-202ENST00000377612 PCSK9Q8NBP7 692 aaKnown RBP20.89■□□□□ 0.93
COMMD6-202ENST00000377612 NUP133Q8WUM0 1156 aa20.89■□□□□ 0.93
COMMD6-202ENST00000377612 TBC1D5Q92609 795 aa20.89■□□□□ 0.93
COMMD6-202ENST00000377612 GLT1D1Q96MS3 346 aa20.89■□□□□ 0.93
COMMD6-202ENST00000377612 UBAC1Q9BSL1 405 aa20.89■□□□□ 0.93
COMMD6-202ENST00000377612 TBX21Q9UL17 535 aa20.89■□□□□ 0.93
COMMD6-202ENST00000377612 COL9A3Q14050 684 aaPredicted RBP20.88■□□□□ 0.93
COMMD6-202ENST00000377612 SHHQ15465 462 aa20.88■□□□□ 0.93
COMMD6-202ENST00000377612 IFIT1BQ5T764 474 aaKnown RBP20.88■□□□□ 0.93
COMMD6-202ENST00000377612 CXCL17Q6UXB2 119 aa20.88■□□□□ 0.93
COMMD6-202ENST00000377612 RUFY2Q8WXA3 655 aa20.88■□□□□ 0.93
COMMD6-202ENST00000377612 TOX2Q96NM4 488 aa20.88■□□□□ 0.93
COMMD6-202ENST00000377612 JMJD4Q9H9V9 463 aa20.88■□□□□ 0.93
COMMD6-202ENST00000377612 SPC25Q9HBM1 224 aa20.88■□□□□ 0.93
COMMD6-202ENST00000377612 COL20A1Q9P218 1284 aa20.88■□□□□ 0.93
COMMD6-202ENST00000377612 ADD3Q9UEY8 706 aaKnown RBP20.88■□□□□ 0.93
COMMD6-202ENST00000377612 PTPRSQ13332 1948 aa20.88■□□□□ 0.93
COMMD6-202ENST00000377612 GRIN2DO15399 1336 aa20.87■□□□□ 0.93
COMMD6-202ENST00000377612 PPP1R11O60927 126 aaPredicted RBP20.87■□□□□ 0.93
COMMD6-202ENST00000377612 PARP1P09874 1014 aaKnown RBP20.87■□□□□ 0.93
COMMD6-202ENST00000377612 ANTXR2P58335 489 aa20.87■□□□□ 0.93
COMMD6-202ENST00000377612 FSCN1Q16658 493 aaKnown RBP20.87■□□□□ 0.93
COMMD6-202ENST00000377612 NOL8Q76FK4 1167 aaKnown RBP20.87■□□□□ 0.93
COMMD6-202ENST00000377612 FAM126BQ8IXS8 530 aa20.87■□□□□ 0.93
COMMD6-202ENST00000377612 U3KPZ7 1027 aaPredicted RBP20.87■□□□□ 0.93
COMMD6-202ENST00000377612 ABCB11O95342 1321 aa20.86■□□□□ 0.93
COMMD6-202ENST00000377612 LOC102724159A0A0B4J2E5 919 aa20.86■□□□□ 0.93
COMMD6-202ENST00000377612 A0A0U1RQG5 324 aaPredicted RBP20.86■□□□□ 0.93
COMMD6-202ENST00000377612 RBM47A0AV96 593 aaKnown RBP20.86■□□□□ 0.93
COMMD6-202ENST00000377612 E7EWF7 191 aa20.86■□□□□ 0.93
COMMD6-202ENST00000377612 OPLAHO14841 1288 aa20.86■□□□□ 0.93
COMMD6-202ENST00000377612 DYNC1LI2O43237 492 aaPredicted RBP20.86■□□□□ 0.93
COMMD6-202ENST00000377612 PWP2Q15269 919 aaKnown RBP20.86■□□□□ 0.93
COMMD6-202ENST00000377612 GPR153Q6NV75 609 aa20.86■□□□□ 0.93
COMMD6-202ENST00000377612 KIAA1211Q6ZU35 1233 aa20.86■□□□□ 0.93
COMMD6-202ENST00000377612 MAD2L2Q9UI95 211 aa20.86■□□□□ 0.93
COMMD6-202ENST00000377612 PNMA2Q9UL42 364 aa20.86■□□□□ 0.93
COMMD6-202ENST00000377612 ARVCFO00192 962 aa20.85■□□□□ 0.93
COMMD6-202ENST00000377612 DUSP28Q4G0W2 176 aa20.85■□□□□ 0.93
COMMD6-202ENST00000377612 IQSEC1Q6DN90 963 aa20.85■□□□□ 0.93
COMMD6-202ENST00000377612 CHST3Q7LGC8 479 aa20.85■□□□□ 0.93
COMMD6-202ENST00000377612 MB21D2Q8IYB1 491 aaPredicted RBP20.85■□□□□ 0.93
COMMD6-202ENST00000377612 SLC43A3Q8NBI5 491 aa20.85■□□□□ 0.93
COMMD6-202ENST00000377612 MAP4K1Q92918 833 aa20.85■□□□□ 0.93
COMMD6-202ENST00000377612 MTMR8Q96EF0 704 aa20.85■□□□□ 0.93
COMMD6-202ENST00000377612 TMEM39AQ9NV64 488 aa20.85■□□□□ 0.93
COMMD6-202ENST00000377612 RBM8AQ9Y5S9 174 aaKnown RBP20.85■□□□□ 0.93
COMMD6-202ENST00000377612 TET1Q8NFU7 2136 aa20.84■□□□□ 0.93
COMMD6-202ENST00000377612 PALM3A6NDB9 673 aaPredicted RBP20.84■□□□□ 0.93
COMMD6-202ENST00000377612 GRM4Q14833 912 aa20.84■□□□□ 0.93
COMMD6-202ENST00000377612 DEFB123Q8N688 67 aa20.84■□□□□ 0.93
COMMD6-202ENST00000377612 SYTL5Q8TDW5 730 aaPredicted RBP20.84■□□□□ 0.93
COMMD6-202ENST00000377612 WDR11Q9BZH6 1224 aa20.84■□□□□ 0.93
COMMD6-202ENST00000377612 LSG1Q9H089 658 aaKnown RBP20.84■□□□□ 0.93
COMMD6-202ENST00000377612 VAT1LQ9HCJ6 419 aa20.84■□□□□ 0.93
COMMD6-202ENST00000377612 Q9Y3F1 56 aa20.84■□□□□ 0.93
COMMD6-202ENST00000377612 EYSQ5T1H1 3165 aa20.84■□□□□ 0.93
COMMD6-202ENST00000377612 MROH7Q68CQ1 1323 aa20.83■□□□□ 0.93
COMMD6-202ENST00000377612 DCDC2CA8MYV0 355 aa20.83■□□□□ 0.93
COMMD6-202ENST00000377612 ARIH2O95376 493 aa20.83■□□□□ 0.93
COMMD6-202ENST00000377612 CD4P01730 458 aa20.83■□□□□ 0.93
COMMD6-202ENST00000377612 RAG1P15918 1043 aa20.83■□□□□ 0.93
COMMD6-202ENST00000377612 PSMC6P62333 389 aa20.83■□□□□ 0.93
COMMD6-202ENST00000377612 RGS22Q8NE09 1264 aa20.83■□□□□ 0.93
COMMD6-202ENST00000377612 DNERQ8NFT8 737 aa20.83■□□□□ 0.93
COMMD6-202ENST00000377612 COPS5Q92905 334 aa20.83■□□□□ 0.93
COMMD6-202ENST00000377612 AP5M1Q9H0R1 490 aa20.83■□□□□ 0.93
COMMD6-202ENST00000377612 GPHNQ9NQX3 736 aaPredicted RBP20.83■□□□□ 0.93
COMMD6-202ENST00000377612 KLRF2D3W0D1 207 aa20.82■□□□□ 0.92
COMMD6-202ENST00000377612 CYTH3O43739 400 aa20.82■□□□□ 0.92
COMMD6-202ENST00000377612 DHX16O60231 1041 aaKnown RBP20.82■□□□□ 0.92
COMMD6-202ENST00000377612 PDE4DQ08499 809 aa20.82■□□□□ 0.92
COMMD6-202ENST00000377612 FBXO11Q86XK2 927 aa20.82■□□□□ 0.92
COMMD6-202ENST00000377612 TAAR1Q96RJ0 339 aa20.82■□□□□ 0.92
COMMD6-202ENST00000377612 MTMR10Q9NXD2 777 aa20.82■□□□□ 0.92
COMMD6-202ENST00000377612 UMODL1Q5DID0 1318 aa20.81■□□□□ 0.92
COMMD6-202ENST00000377612 IFIT3O14879 490 aaKnown RBP20.81■□□□□ 0.92
COMMD6-202ENST00000377612 TIMP1P01033 207 aa20.81■□□□□ 0.92
COMMD6-202ENST00000377612 FPGSQ05932 587 aa20.81■□□□□ 0.92
COMMD6-202ENST00000377612 TROAPQ12815 778 aa20.81■□□□□ 0.92
COMMD6-202ENST00000377612 TRDNQ13061 729 aa20.81■□□□□ 0.92
COMMD6-202ENST00000377612 NCOA7Q8NI08 942 aa20.81■□□□□ 0.92
COMMD6-202ENST00000377612 VTI1AQ96AJ9 217 aa20.81■□□□□ 0.92
COMMD6-202ENST00000377612 ESYT1Q9BSJ8 1104 aa20.81■□□□□ 0.92
COMMD6-202ENST00000377612 GHRHRQ02643 423 aa20.8■□□□□ 0.92
COMMD6-202ENST00000377612 ITGA7Q13683 1181 aa20.8■□□□□ 0.92
COMMD6-202ENST00000377612 WTAPQ15007 396 aa20.8■□□□□ 0.92
COMMD6-202ENST00000377612 RALYLQ86SE5 291 aaKnown RBP20.8■□□□□ 0.92
COMMD6-202ENST00000377612 OR6J1Q8NGC5 347 aa20.8■□□□□ 0.92
COMMD6-202ENST00000377612 PPP1R12CQ9BZL4 782 aa20.8■□□□□ 0.92
COMMD6-202ENST00000377612 MYO9BQ13459 2157 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms