RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 STYK1Q6J9G0 422 aa15.68■□□□□ 0.1
MSH5-202ENST00000375740 POTEDQ86YR6 584 aa15.68■□□□□ 0.1
MSH5-202ENST00000375740 MRIQ9BWK5 157 aa15.68■□□□□ 0.1
MSH5-202ENST00000375740 DNAJC18Q9H819 358 aa15.68■□□□□ 0.1
MSH5-202ENST00000375740 FAM196BA6NMK8 535 aa15.68■□□□□ 0.1
MSH5-202ENST00000375740 PPP1R11O60927 126 aaPredicted RBP15.68■□□□□ 0.1
MSH5-202ENST00000375740 CHRNA5P30532 468 aa15.68■□□□□ 0.1
MSH5-202ENST00000375740 KCNB1Q14721 858 aa15.68■□□□□ 0.1
MSH5-202ENST00000375740 KRT31Q15323 416 aa15.68■□□□□ 0.1
MSH5-202ENST00000375740 KCTD1Q719H9 257 aa15.68■□□□□ 0.1
MSH5-202ENST00000375740 FCHSD1Q86WN1 690 aa15.68■□□□□ 0.1
MSH5-202ENST00000375740 IGSF22Q8N9C0 903 aa15.68■□□□□ 0.1
MSH5-202ENST00000375740 EHD4Q9H223 541 aa15.68■□□□□ 0.1
MSH5-202ENST00000375740 ARGLU1Q9NWB6 273 aaPredicted RBP15.68■□□□□ 0.1
MSH5-202ENST00000375740 LIMA1Q9UHB6 759 aaKnown RBP15.68■□□□□ 0.1
MSH5-202ENST00000375740 SLX4Q8IY92 1834 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 DDTLA6NHG4 134 aaPredicted RBP15.67■□□□□ 0.1
MSH5-202ENST00000375740 LRRC10BA6NIK2 292 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 AKR1B15C9JRZ8 316 aaPredicted RBP15.67■□□□□ 0.1
MSH5-202ENST00000375740 EDIL3O43854 480 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 MYL1P05976 194 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 CCT6AP40227 531 aaKnown RBP15.67■□□□□ 0.1
MSH5-202ENST00000375740 TXKP42681 527 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 RBL2Q08999 1139 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 CCDC96Q2M329 555 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 ADSSL1Q8N142 457 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 MNS1Q8NEH6 495 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 CPLX3Q8WVH0 158 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 CCDC17Q96LX7 622 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 USP17L10C9JJH3 530 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 CC2D1AQ6P1N0 951 aaPredicted RBP15.67■□□□□ 0.1
MSH5-202ENST00000375740 PPFIBP1Q86W92 1011 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 CUEDC2Q9H467 287 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 FAM198AQ9UFP1 575 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 PPP2R2CQ9Y2T4 447 aa15.67■□□□□ 0.1
MSH5-202ENST00000375740 MYH4Q9Y623 1939 aa15.66■□□□□ 0.1
MSH5-202ENST00000375740 FKBP1AP62942 108 aaKnown RBP15.66■□□□□ 0.1
MSH5-202ENST00000375740 ORC2Q13416 577 aaPredicted RBP15.66■□□□□ 0.1
MSH5-202ENST00000375740 SHROOM1Q2M3G4 852 aaPredicted RBP15.66■□□□□ 0.1
MSH5-202ENST00000375740 MTMR9Q96QG7 549 aa15.66■□□□□ 0.1
MSH5-202ENST00000375740 MMTAG2Q9BU76 263 aaKnown RBP15.66■□□□□ 0.1
MSH5-202ENST00000375740 VPS16Q9H269 839 aa15.66■□□□□ 0.1
MSH5-202ENST00000375740 SCN9AQ15858 1988 aa15.66■□□□□ 0.1
MSH5-202ENST00000375740 ZSCAN12O43309 604 aa15.66■□□□□ 0.1
MSH5-202ENST00000375740 RHOBTB3O94955 611 aa15.66■□□□□ 0.1
MSH5-202ENST00000375740 TUBB4AP04350 444 aa15.66■□□□□ 0.1
MSH5-202ENST00000375740 TCP11X2Q5H9J9 407 aa15.66■□□□□ 0.1
MSH5-202ENST00000375740 GPATCH4Q5T3I0 446 aaKnown RBP15.66■□□□□ 0.1
MSH5-202ENST00000375740 SH3BP5LQ7L8J4 393 aa15.66■□□□□ 0.1
MSH5-202ENST00000375740 ZSCAN29Q8IWY8 852 aaPredicted RBP15.66■□□□□ 0.1
MSH5-202ENST00000375740 DHX36Q9H2U1 1008 aaKnown RBP15.66■□□□□ 0.1
MSH5-202ENST00000375740 RIC8AQ9NPQ8 531 aa15.66■□□□□ 0.1
MSH5-202ENST00000375740 GREB1LQ9C091 1923 aaPredicted RBP15.66■□□□□ 0.1
MSH5-202ENST00000375740 TRIM49BA6NDI0 452 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 KCNJ18B7U540 433 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 H7C1D1 291 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 N4BP3O15049 544 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 SLC37A4O43826 429 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 TDP2O95551 362 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 HDLBPQ00341 1268 aaKnown RBP15.65■□□□□ 0.1
MSH5-202ENST00000375740 KCNJ12Q14500 433 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 CALCRLQ16602 461 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 UBE2SQ16763 222 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 IDI2Q9BXS1 227 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 TAB2Q9NYJ8 693 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 PI4KBQ9UBF8 816 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 C10orf71Q711Q0 1435 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 H3BQF6 201 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 RAD21O60216 631 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 EEF2P13639 858 aaKnown RBP15.65■□□□□ 0.1
MSH5-202ENST00000375740 LMAN1P49257 510 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 COPB1P53618 953 aaKnown RBP15.65■□□□□ 0.1
MSH5-202ENST00000375740 PMS1P54277 932 aaKnown RBP15.65■□□□□ 0.1
MSH5-202ENST00000375740 SPAG1Q07617 926 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 AOC3Q16853 763 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 CERKLQ49MI3 558 aaPredicted RBP15.65■□□□□ 0.1
MSH5-202ENST00000375740 TOGARAM2Q6ZUX3 1019 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 GIMAP8Q8ND71 665 aaPredicted RBP15.65■□□□□ 0.1
MSH5-202ENST00000375740 PANX2Q96RD6 677 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 MAGEF1Q9HAY2 307 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 ADAM21Q9UKJ8 722 aa15.65■□□□□ 0.1
MSH5-202ENST00000375740 ZBTB5O15062 677 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 TNNI2P48788 182 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 PPP1R18Q6NYC8 613 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 IRF2BP1Q8IU81 584 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 TRIM9Q9C026 710 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 FOXR1Q6PIV2 292 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 SRLQ86TD4 932 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 CNKSR1Q969H4 720 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 MTMR8Q96EF0 704 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 CALML4Q96GE6 196 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 C7orf25Q9BPX7 421 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 EFCC1Q9HA90 598 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 LRWD1Q9UFC0 647 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 SIPA1L1O43166 1804 aa15.64■□□□□ 0.09
MSH5-202ENST00000375740 CASQ1P31415 396 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 CASP14P31944 242 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 CLK2P49760 499 aaKnown RBP15.63■□□□□ 0.09
MSH5-202ENST00000375740 SEMA3FQ13275 785 aa15.63■□□□□ 0.09
MSH5-202ENST00000375740 ANKRD20A12PQ8NF67 263 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms