RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 AGBL1Q96MI9 1066 aa14.32□□□□□ -0.12
LSM2-208ENST00000375661 TRERF1Q96PN7 1200 aa14.32□□□□□ -0.12
LSM2-208ENST00000375661 UHRF1Q96T88 793 aaPredicted RBP14.32□□□□□ -0.12
LSM2-208ENST00000375661 NOC4LQ9BVI4 516 aaKnown RBP14.32□□□□□ -0.12
LSM2-208ENST00000375661 VTA1Q9NP79 307 aa14.32□□□□□ -0.12
LSM2-208ENST00000375661 GRIN2DO15399 1336 aa14.32□□□□□ -0.12
LSM2-208ENST00000375661 SGSM2O43147 1006 aa14.31□□□□□ -0.12
LSM2-208ENST00000375661 DYNC1LI2O43237 492 aaPredicted RBP14.31□□□□□ -0.12
LSM2-208ENST00000375661 B4GALT4O60513 344 aa14.31□□□□□ -0.12
LSM2-208ENST00000375661 SUPT20HL2P0C7V6 817 aa14.31□□□□□ -0.12
LSM2-208ENST00000375661 HSPD1P10809 573 aaKnown RBP14.31□□□□□ -0.12
LSM2-208ENST00000375661 TFAP4Q01664 338 aa14.31□□□□□ -0.12
LSM2-208ENST00000375661 IKQ13123 557 aaPredicted RBP14.31□□□□□ -0.12
LSM2-208ENST00000375661 AAK1Q2M2I8 961 aa14.31□□□□□ -0.12
LSM2-208ENST00000375661 TAPT1Q6NXT6 567 aa14.31□□□□□ -0.12
LSM2-208ENST00000375661 WNT8AQ9H1J5 351 aa14.31□□□□□ -0.12
LSM2-208ENST00000375661 CYP39A1Q9NYL5 469 aa14.31□□□□□ -0.12
LSM2-208ENST00000375661 YBX2Q9Y2T7 364 aaKnown RBP14.31□□□□□ -0.12
LSM2-208ENST00000375661 SLC4A7Q9Y6M7 1214 aa14.31□□□□□ -0.12
LSM2-208ENST00000375661 UMODL1Q5DID0 1318 aa14.31□□□□□ -0.12
LSM2-208ENST00000375661 RAD50Q92878 1312 aa14.31□□□□□ -0.12
LSM2-208ENST00000375661 TANC1Q9C0D5 1861 aa14.31□□□□□ -0.12
LSM2-208ENST00000375661 TCF20Q9UGU0 1960 aaKnown RBP14.31□□□□□ -0.12
LSM2-208ENST00000375661 MUC3AQ02505 3323 aa14.3□□□□□ -0.12
LSM2-208ENST00000375661 CDC45O75419 566 aa14.3□□□□□ -0.12
LSM2-208ENST00000375661 ALAS1P13196 640 aa14.3□□□□□ -0.12
LSM2-208ENST00000375661 CCL23P55773 120 aa14.3□□□□□ -0.12
LSM2-208ENST00000375661 CCDC85BQ15834 202 aaPredicted RBP14.3□□□□□ -0.12
LSM2-208ENST00000375661 PPP2R2DQ66LE6 453 aa14.3□□□□□ -0.12
LSM2-208ENST00000375661 RCSD1Q6JBY9 416 aa14.3□□□□□ -0.12
LSM2-208ENST00000375661 RUFY2Q8WXA3 655 aa14.3□□□□□ -0.12
LSM2-208ENST00000375661 POLR3EQ9NVU0 708 aa14.3□□□□□ -0.12
LSM2-208ENST00000375661 ISY1Q9ULR0 285 aaKnown RBP14.3□□□□□ -0.12
LSM2-208ENST00000375661 SCN10AQ9Y5Y9 1956 aa14.3□□□□□ -0.12
LSM2-208ENST00000375661 SCN5AQ14524 2016 aa14.3□□□□□ -0.12
LSM2-208ENST00000375661 NCOR1O75376 2440 aa14.29□□□□□ -0.12
LSM2-208ENST00000375661 POU3F3P20264 500 aaPredicted RBP14.29□□□□□ -0.12
LSM2-208ENST00000375661 MFAP1P55081 439 aaKnown RBP14.29□□□□□ -0.12
LSM2-208ENST00000375661 PPARAQ07869 468 aa14.29□□□□□ -0.12
LSM2-208ENST00000375661 ALX1Q15699 326 aa14.29□□□□□ -0.12
LSM2-208ENST00000375661 DUSP28Q4G0W2 176 aa14.29□□□□□ -0.12
LSM2-208ENST00000375661 FBXO16Q8IX29 292 aaPredicted RBP14.29□□□□□ -0.12
LSM2-208ENST00000375661 ESYT1Q9BSJ8 1104 aa14.29□□□□□ -0.12
LSM2-208ENST00000375661 NAPBQ9H115 298 aa14.29□□□□□ -0.12
LSM2-208ENST00000375661 TRPV6Q9H1D0 765 aa14.29□□□□□ -0.12
LSM2-208ENST00000375661 ALDH8A1Q9H2A2 487 aaPredicted RBP14.29□□□□□ -0.12
LSM2-208ENST00000375661 PDGFCQ9NRA1 345 aa14.29□□□□□ -0.12
LSM2-208ENST00000375661 ADD3Q9UEY8 706 aaKnown RBP14.29□□□□□ -0.12
LSM2-208ENST00000375661 PRR12Q9ULL5 1215 aa14.29□□□□□ -0.12
LSM2-208ENST00000375661 CHD9Q3L8U1 2897 aa14.28□□□□□ -0.12
LSM2-208ENST00000375661 ZBBXA8MT70 800 aa14.28□□□□□ -0.12
LSM2-208ENST00000375661 FGAP02671 866 aa14.28□□□□□ -0.12
LSM2-208ENST00000375661 ATP2A2P16615 1042 aaKnown RBP14.28□□□□□ -0.12
LSM2-208ENST00000375661 MCCP23508 829 aa14.28□□□□□ -0.12
LSM2-208ENST00000375661 RFC2P35250 354 aa14.28□□□□□ -0.12
LSM2-208ENST00000375661 RABGGTBP53611 331 aa14.28□□□□□ -0.12
LSM2-208ENST00000375661 KIAA1211Q6ZU35 1233 aa14.28□□□□□ -0.12
LSM2-208ENST00000375661 TSPY2A6NKD2 308 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 ICAM1P05362 532 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 ACTN1P12814 892 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 BMP1P13497 986 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 NOVP48745 357 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 CPT1AP50416 773 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 PSMC6P62333 389 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 PTH1RQ03431 593 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 BRDTQ58F21 947 aaPredicted RBP14.27□□□□□ -0.13
LSM2-208ENST00000375661 MUM1L1Q5H9M0 696 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 TMEM67Q5HYA8 995 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 KCTD1Q719H9 257 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 EEPD1Q7L9B9 569 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 PHOSPHO2Q8TCD6 241 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 VWCEQ96DN2 955 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 DSCC1Q9BVC3 393 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 C1QTNF1Q9BXJ1 281 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 PNMA2Q9UL42 364 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 CCPG1Q9ULG6 757 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 STX8Q9UNK0 236 aa14.27□□□□□ -0.13
LSM2-208ENST00000375661 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.27□□□□□ -0.13
LSM2-208ENST00000375661 TNKSO95271 1327 aa14.26□□□□□ -0.13
LSM2-208ENST00000375661 ZMYM6O95789 1325 aa14.26□□□□□ -0.13
LSM2-208ENST00000375661 RBM47A0AV96 593 aaKnown RBP14.26□□□□□ -0.13
LSM2-208ENST00000375661 NKRFO15226 690 aaKnown RBP eCLIP14.26□□□□□ -0.13
LSM2-208ENST00000375661 GTPBP6O43824 516 aaPredicted RBP14.26□□□□□ -0.13
LSM2-208ENST00000375661 PLA2G5P39877 138 aa14.26□□□□□ -0.13
LSM2-208ENST00000375661 ALDH5A1P51649 535 aaPredicted RBP14.26□□□□□ -0.13
LSM2-208ENST00000375661 PURAQ00577 322 aaKnown RBP14.26□□□□□ -0.13
LSM2-208ENST00000375661 NSMFQ6X4W1 530 aa14.26□□□□□ -0.13
LSM2-208ENST00000375661 DCAF4Q8WV16 495 aa14.26□□□□□ -0.13
LSM2-208ENST00000375661 SCLYQ96I15 445 aa14.26□□□□□ -0.13
LSM2-208ENST00000375661 SLC9A7Q96T83 725 aa14.26□□□□□ -0.13
LSM2-208ENST00000375661 MTG1Q9BT17 334 aaPredicted RBP14.26□□□□□ -0.13
LSM2-208ENST00000375661 WDR11Q9BZH6 1224 aa14.26□□□□□ -0.13
LSM2-208ENST00000375661 RANBP17Q9H2T7 1088 aaKnown RBP14.26□□□□□ -0.13
LSM2-208ENST00000375661 PITPNM1O00562 1244 aa14.25□□□□□ -0.13
LSM2-208ENST00000375661 KPNA6O60684 536 aa14.25□□□□□ -0.13
LSM2-208ENST00000375661 MYOGP15173 224 aa14.25□□□□□ -0.13
LSM2-208ENST00000375661 PTPN11Q06124 597 aaPredicted RBP14.25□□□□□ -0.13
LSM2-208ENST00000375661 TTLL4Q14679 1199 aa14.25□□□□□ -0.13
LSM2-208ENST00000375661 NFRKBQ6P4R8 1299 aa14.25□□□□□ -0.13
LSM2-208ENST00000375661 BTNL9Q6UXG8 535 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms