RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 ADAMTSL1Q8N6G6 1762 aa9.22□□□□□ -0.93
UBR4-202ENST00000375224 PPIP5K2O43314 1243 aa9.21□□□□□ -0.93
UBR4-202ENST00000375224 KIF1CO43896 1103 aaKnown RBP9.21□□□□□ -0.93
UBR4-202ENST00000375224 AOC3Q16853 763 aa9.21□□□□□ -0.93
UBR4-202ENST00000375224 CDKAL1Q5VV42 579 aa9.21□□□□□ -0.93
UBR4-202ENST00000375224 COA7Q96BR5 231 aa9.21□□□□□ -0.93
UBR4-202ENST00000375224 DRC1Q96MC2 740 aa9.21□□□□□ -0.93
UBR4-202ENST00000375224 KBTBD4Q9NVX7 518 aa9.21□□□□□ -0.93
UBR4-202ENST00000375224 ZNF219Q9P2Y4 722 aaPredicted RBP9.21□□□□□ -0.93
UBR4-202ENST00000375224 FAM198AQ9UFP1 575 aa9.21□□□□□ -0.93
UBR4-202ENST00000375224 CD44P16070 742 aaKnown RBP9.21□□□□□ -0.94
UBR4-202ENST00000375224 GCFC2P16383 781 aaKnown RBP9.21□□□□□ -0.94
UBR4-202ENST00000375224 HNRNPH2P55795 449 aaKnown RBP9.21□□□□□ -0.94
UBR4-202ENST00000375224 TCP10Q12799 353 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 TBX2Q13207 712 aaPredicted RBP9.21□□□□□ -0.94
UBR4-202ENST00000375224 CALCRLQ16602 461 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 LRCH2Q5VUJ6 765 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 STAMQ92783 540 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 VPS33BQ9H267 617 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 CWC15Q9P013 229 aaKnown RBP9.21□□□□□ -0.94
UBR4-202ENST00000375224 SYNPO2Q9UMS6 1093 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 CTNND2Q9UQB3 1225 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 SCN9AQ15858 1988 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 ATRNL1Q5VV63 1379 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 H7C1D1 291 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 IRF6O14896 467 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 CASP1P29466 404 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 CASQ1P31415 396 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 SLC1A4P43007 532 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 FXR2P51116 673 aaKnown RBP eCLIP9.21□□□□□ -0.943e-9■■■■□ 25.3
UBR4-202ENST00000375224 PDIA5Q14554 519 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 EZH2Q15910 746 aaKnown RBP9.21□□□□□ -0.94
UBR4-202ENST00000375224 CCDC93Q567U6 631 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 SLFN13Q68D06 897 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 PPP4R3AQ6IN85 833 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 MED15Q96RN5 788 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 MTRQ99707 1265 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 LRRC27Q9C0I9 530 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 DONSONQ9NYP3 566 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 HDAC9Q9UKV0 1011 aa9.21□□□□□ -0.94
UBR4-202ENST00000375224 ZNF646O15015 1829 aaPredicted RBP9.2□□□□□ -0.94
UBR4-202ENST00000375224 DDTLA6NHG4 134 aaPredicted RBP9.2□□□□□ -0.94
UBR4-202ENST00000375224 ARHGAP6O43182 974 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 ZSCAN12O43309 604 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 TPM1P09493 284 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 EEF2P13639 858 aaKnown RBP9.2□□□□□ -0.94
UBR4-202ENST00000375224 NOP2P46087 812 aaKnown RBP9.2□□□□□ -0.94
UBR4-202ENST00000375224 STX17P56962 302 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 NAALADL2Q58DX5 795 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 TEX35Q5T0J7 233 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 ZFPM1Q8IX07 1006 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 TTLL6Q8N841 843 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 IGSF22Q8N9C0 903 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 TMEM232C9JQI7 657 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 RHOBTB3O94955 611 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 CDC25AP30304 524 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 ICA1Q05084 483 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 ABCB5Q2M3G0 1257 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 RBM26Q5T8P6 1007 aaKnown RBP9.2□□□□□ -0.94
UBR4-202ENST00000375224 PPFIBP1Q86W92 1011 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 KIF18AQ8NI77 898 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 NOC3LQ8WTT2 800 aaKnown RBP9.2□□□□□ -0.94
UBR4-202ENST00000375224 NELFBQ8WX92 580 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 MTMR9Q96QG7 549 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 C7orf25Q9BPX7 421 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 DNAJC18Q9H819 358 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 PSTPIP2Q9H939 334 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 INTS13Q9NVM9 706 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 STK17AQ9UEE5 414 aa9.2□□□□□ -0.94
UBR4-202ENST00000375224 GOLGA6L9A6NEM1 432 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 PSMA7O14818 248 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 SLC26A4O43511 780 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 STX10O60499 249 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 TECP42680 631 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 CLK2P49760 499 aaKnown RBP9.19□□□□□ -0.94
UBR4-202ENST00000375224 EN1Q05925 392 aaPredicted RBP9.19□□□□□ -0.94
UBR4-202ENST00000375224 TRAF1Q13077 416 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 KCTD1Q719H9 257 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 CLEC10AQ8IUN9 316 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 GMCL1P1Q8NEA9 526 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 CDK5RAP3Q96JB5 506 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 TMEM260Q9NX78 707 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 ADD3Q9UEY8 706 aaKnown RBP9.19□□□□□ -0.94
UBR4-202ENST00000375224 LRWD1Q9UFC0 647 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 LIMA1Q9UHB6 759 aaKnown RBP9.19□□□□□ -0.94
UBR4-202ENST00000375224 HERC5Q9UII4 1024 aaKnown RBP9.19□□□□□ -0.94
UBR4-202ENST00000375224 SIPA1L1O43166 1804 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 PSME4Q14997 1843 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 LRRC10BA6NIK2 292 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 RIOK3O14730 519 aaKnown RBP9.19□□□□□ -0.94
UBR4-202ENST00000375224 PLCG1P19174 1290 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 SF3B2Q13435 895 aaKnown RBP9.19□□□□□ -0.94
UBR4-202ENST00000375224 HSP90AA4PQ58FG1 418 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 TTBK2Q6IQ55 1244 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 SMYD4Q8IYR2 804 aaPredicted RBP9.19□□□□□ -0.94
UBR4-202ENST00000375224 ADSSL1Q8N142 457 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 DHTKD1Q96HY7 919 aaPredicted RBP9.19□□□□□ -0.94
UBR4-202ENST00000375224 TRMT1Q9NXH9 659 aaKnown RBP9.19□□□□□ -0.94
UBR4-202ENST00000375224 JRKLQ9Y4A0 524 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms