RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 LPIN2Q92539 896 aa21.57■■□□□ 1.04
COL15A1-201ENST00000375001 NYXQ9GZU5 481 aa21.57■■□□□ 1.04
COL15A1-201ENST00000375001 ADAM21Q9UKJ8 722 aa21.57■■□□□ 1.04
COL15A1-201ENST00000375001 KDM5CP41229 1560 aa21.57■■□□□ 1.04
COL15A1-201ENST00000375001 ARHGEF10O15013 1369 aa21.57■■□□□ 1.04
COL15A1-201ENST00000375001 KRT82Q9NSB4 513 aa21.57■■□□□ 1.04
COL15A1-201ENST00000375001 H0Y3Z8 333 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 PDIA3P30101 505 aaKnown RBP21.56■■□□□ 1.04
COL15A1-201ENST00000375001 PDE1BQ01064 536 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 CYP4F22Q6NT55 531 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 SMYD2Q9NRG4 433 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 MSH2P43246 934 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 RBL2Q08999 1139 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 TBK1Q9UHD2 729 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 DDB1Q16531 1140 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 EFHD1Q9BUP0 239 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 ACTN3Q08043 901 aaPredicted RBP21.56■■□□□ 1.04
COL15A1-201ENST00000375001 GNPTABQ3T906 1256 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 SNX1Q13596 522 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 ZNF654Q8IZM8 581 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 CCHCR1Q8TD31 782 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 SPZ1Q9BXG8 430 aa21.56■■□□□ 1.04
COL15A1-201ENST00000375001 ADCY9O60503 1353 aa21.55■■□□□ 1.04
COL15A1-201ENST00000375001 RIMBP2O15034 1052 aa21.55■■□□□ 1.04
COL15A1-201ENST00000375001 PPP2R5BQ15173 497 aa21.55■■□□□ 1.04
COL15A1-201ENST00000375001 HADHQ16836 314 aaKnown RBP21.55■■□□□ 1.04
COL15A1-201ENST00000375001 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.55■■□□□ 1.04
COL15A1-201ENST00000375001 STK24Q9Y6E0 443 aa21.55■■□□□ 1.04
COL15A1-201ENST00000375001 BTBD18B2RXH4 712 aa21.55■■□□□ 1.04
COL15A1-201ENST00000375001 PDHA1P08559 390 aa21.55■■□□□ 1.04
COL15A1-201ENST00000375001 POMGNT1Q8WZA1 660 aa21.55■■□□□ 1.04
COL15A1-201ENST00000375001 GINS2Q9Y248 185 aa21.55■■□□□ 1.04
COL15A1-201ENST00000375001 MAGI3Q5TCQ9 1506 aa21.55■■□□□ 1.04
COL15A1-201ENST00000375001 MCUQ8NE86 351 aa21.55■■□□□ 1.04
COL15A1-201ENST00000375001 PACSIN2Q9UNF0 486 aaPredicted RBP21.55■■□□□ 1.04
COL15A1-201ENST00000375001 ESRRAP11474 423 aaPredicted RBP21.54■■□□□ 1.04
COL15A1-201ENST00000375001 HIBADHP31937 336 aaKnown RBP21.54■■□□□ 1.04
COL15A1-201ENST00000375001 DPCR1Q3MIW9 517 aa21.54■■□□□ 1.04
COL15A1-201ENST00000375001 FTOQ9C0B1 505 aaKnown RBP eCLIP21.54■■□□□ 1.04
COL15A1-201ENST00000375001 DISP1Q96F81 1524 aa21.54■■□□□ 1.04
COL15A1-201ENST00000375001 hCG_2014768A0A024R1R8 64 aa21.54■■□□□ 1.04
COL15A1-201ENST00000375001 GPBP1Q86WP2 473 aa21.54■■□□□ 1.04
COL15A1-201ENST00000375001 FAM167BQ9BTA0 163 aa21.54■■□□□ 1.04
COL15A1-201ENST00000375001 ZC3H12CQ9C0D7 883 aaKnown RBP21.54■■□□□ 1.04
COL15A1-201ENST00000375001 PCYT1AP49585 367 aa21.54■■□□□ 1.04
COL15A1-201ENST00000375001 ACRBPQ8NEB7 543 aa21.54■■□□□ 1.04
COL15A1-201ENST00000375001 ERBB4Q15303 1308 aa21.54■■□□□ 1.04
COL15A1-201ENST00000375001 EIF4E1BA6NMX2 242 aaKnown RBP21.54■■□□□ 1.04
COL15A1-201ENST00000375001 PDCLQ13371 301 aa21.54■■□□□ 1.04
COL15A1-201ENST00000375001 MESDQ14696 234 aa21.54■■□□□ 1.04
COL15A1-201ENST00000375001 GLT8D2Q9H1C3 349 aa21.54■■□□□ 1.04
COL15A1-201ENST00000375001 FGAP02671 866 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 GARSP41250 739 aaKnown RBP21.53■■□□□ 1.04
COL15A1-201ENST00000375001 FAM47AQ5JRC9 791 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 ALS2CLQ60I27 953 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 TRMT10CQ7L0Y3 403 aaKnown RBP21.53■■□□□ 1.04
COL15A1-201ENST00000375001 TUBB6Q9BUF5 446 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 NT5C3AQ9H0P0 336 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 IRAK4Q9NWZ3 460 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 SEPT10Q9P0V9 454 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 TMEM259Q4ZIN3 620 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 CDKL2Q92772 493 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 SLC39A2Q9NP94 309 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 SPTLC3Q9NUV7 552 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 TLR7Q9NYK1 1049 aaKnown RBP21.53■■□□□ 1.04
COL15A1-201ENST00000375001 KDM5DQ9BY66 1539 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 ECM2O94769 699 aaPredicted RBP21.53■■□□□ 1.04
COL15A1-201ENST00000375001 ELAC2Q9BQ52 826 aaKnown RBP21.53■■□□□ 1.04
COL15A1-201ENST00000375001 PCDHA5Q9Y5H7 936 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 ORC6Q9Y5N6 252 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 KDRP35968 1356 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 KDM6BO15054 1643 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 MYCLP12524 364 aaPredicted RBP21.53■■□□□ 1.04
COL15A1-201ENST00000375001 TMTC4Q5T4D3 741 aa21.53■■□□□ 1.04
COL15A1-201ENST00000375001 LOC102724159A0A0B4J2E5 919 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 HMGB1P1B2RPK0 211 aaPredicted RBP21.52■■□□□ 1.04
COL15A1-201ENST00000375001 RPN1P04843 607 aaKnown RBP21.52■■□□□ 1.04
COL15A1-201ENST00000375001 ECE1P42892 770 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 SLC7A5Q01650 507 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 PWP2Q15269 919 aaKnown RBP21.52■■□□□ 1.04
COL15A1-201ENST00000375001 C16orf87Q6PH81 154 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 HIPK4Q8NE63 616 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 NRBF2Q96F24 287 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 CFLARO15519 480 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 GTPBP6O43824 516 aaPredicted RBP21.52■■□□□ 1.04
COL15A1-201ENST00000375001 STAM2O75886 525 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 SYF2O95926 243 aaKnown RBP21.52■■□□□ 1.04
COL15A1-201ENST00000375001 TRIM50Q86XT4 487 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 TPH2Q8IWU9 490 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 WDR91A4D1P6 747 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 LARGE1O95461 756 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 STX1BP61266 288 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 TRIM42Q8IWZ5 723 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 RTEL1Q9NZ71 1219 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 PLXNC1O60486 1568 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 ZMYM6O95789 1325 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 KRT10P13645 584 aa21.52■■□□□ 1.04
COL15A1-201ENST00000375001 SCHIP1Q9P0W5 487 aaPredicted RBP21.52■■□□□ 1.04
COL15A1-201ENST00000375001 PRPF6O94906 941 aaKnown RBP21.52■■□□□ 1.03
COL15A1-201ENST00000375001 REXO1Q8N1G1 1221 aaKnown RBP21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms