RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 TUBGCP2Q9BSJ2 902 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 PCDHB13Q9Y5F0 798 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 EPN1Q9Y6I3 576 aaPredicted RBP8.67□□□□□ -1.02
HERC4-202ENST00000373700 TESPA1A2RU30 521 aaPredicted RBP8.67□□□□□ -1.02
HERC4-202ENST00000373700 POTEMA6NI47 508 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 HARSP12081 509 aaKnown RBP8.67□□□□□ -1.02
HERC4-202ENST00000373700 DPEP1P16444 411 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 CERS3Q8IU89 383 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 RGS22Q8NE09 1264 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 HPS3Q969F9 1004 aa8.67□□□□□ -1.02
HERC4-202ENST00000373700 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.67□□□□□ -1.02
HERC4-202ENST00000373700 POTEB2H3BUK9 544 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 ERLIN2O94905 339 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 SRGNP10124 158 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 RASA1P20936 1047 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 KRT31Q15323 416 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 GPR162Q16538 588 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 CRAMP1Q96RY5 1269 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 PDGFDQ9GZP0 370 aaPredicted RBP8.66□□□□□ -1.02
HERC4-202ENST00000373700 NBPF3Q9H094 633 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 PIM2Q9P1W9 311 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 DDX25Q9UHL0 483 aaKnown RBP8.66□□□□□ -1.02
HERC4-202ENST00000373700 RSPH14Q9UHP6 348 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 FBXO2Q9UK22 296 aaPredicted RBP8.66□□□□□ -1.02
HERC4-202ENST00000373700 TOPAZ1Q8N9V7 1692 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 POLRMTO00411 1230 aaKnown RBP8.66□□□□□ -1.02
HERC4-202ENST00000373700 BUB1O43683 1085 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 PCP11498 1178 aaKnown RBP8.66□□□□□ -1.02
HERC4-202ENST00000373700 LONP1P36776 959 aaKnown RBP8.66□□□□□ -1.02
HERC4-202ENST00000373700 CDR1P51861 262 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 PABPC4Q13310 644 aaKnown RBP eCLIP8.66□□□□□ -1.02
HERC4-202ENST00000373700 ILDR1Q86SU0 546 aaPredicted RBP8.66□□□□□ -1.02
HERC4-202ENST00000373700 LZTS2Q9BRK4 669 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 KANSL2Q9H9L4 492 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 KIAA1024Q9UPX6 916 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 BMP3P12645 472 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 CKAP4Q07065 602 aaKnown RBP8.66□□□□□ -1.02
HERC4-202ENST00000373700 IFFO1Q0D2I5 559 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 UTP14CQ5TAP6 766 aaKnown RBP8.66□□□□□ -1.02
HERC4-202ENST00000373700 E4F1Q66K89 784 aaPredicted RBP8.66□□□□□ -1.02
HERC4-202ENST00000373700 CIAPIN1Q6FI81 312 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 TMC4Q7Z404 712 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 GPBP1Q86WP2 473 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 BICD1Q96G01 975 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 CNOT6LQ96LI5 555 aaKnown RBP8.66□□□□□ -1.02
HERC4-202ENST00000373700 IFIH1Q9BYX4 1025 aaKnown RBP8.66□□□□□ -1.02
HERC4-202ENST00000373700 TAOK3Q9H2K8 898 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 EHMT1Q9H9B1 1298 aa8.66□□□□□ -1.02
HERC4-202ENST00000373700 F5H6K3 240 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 CCZ1BP86790 482 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 CCZ1P86791 482 aaPredicted RBP8.65□□□□□ -1.02
HERC4-202ENST00000373700 KLRC3Q07444 240 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 TROAPQ12815 778 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 CDC37Q16543 378 aaPredicted RBP8.65□□□□□ -1.02
HERC4-202ENST00000373700 KMT5BQ4FZB7 885 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 HS2ST1Q7LGA3 356 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 SMCR8Q8TEV9 937 aaPredicted RBP8.65□□□□□ -1.02
HERC4-202ENST00000373700 ZNF341Q9BYN7 854 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 GINS2Q9Y248 185 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 CETN3O15182 167 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 GCNT3O95395 438 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 TDP2O95551 362 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 OAS2P29728 719 aaKnown RBP8.65□□□□□ -1.02
HERC4-202ENST00000373700 CXCR5P32302 372 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 PRCPP42785 496 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 PFKFB3Q16875 520 aaPredicted RBP8.65□□□□□ -1.02
HERC4-202ENST00000373700 FAM83BQ5T0W9 1011 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 SECISBP2LQ93073 1101 aaKnown RBP8.65□□□□□ -1.02
HERC4-202ENST00000373700 SH2D3AQ9BRG2 576 aa8.65□□□□□ -1.02
HERC4-202ENST00000373700 ZEB2O60315 1214 aa8.65□□□□□ -1.03
HERC4-202ENST00000373700 CETN1Q12798 172 aa8.65□□□□□ -1.03
HERC4-202ENST00000373700 EEPD1Q7L9B9 569 aa8.65□□□□□ -1.03
HERC4-202ENST00000373700 FAM212AQ96EL1 285 aa8.65□□□□□ -1.03
HERC4-202ENST00000373700 PRMT6Q96LA8 375 aaPredicted RBP8.65□□□□□ -1.03
HERC4-202ENST00000373700 CCDC17Q96LX7 622 aa8.65□□□□□ -1.03
HERC4-202ENST00000373700 TRIM31Q9BZY9 425 aa8.65□□□□□ -1.03
HERC4-202ENST00000373700 TMEM39BQ9GZU3 492 aa8.65□□□□□ -1.03
HERC4-202ENST00000373700 CCPG1Q9ULG6 757 aa8.65□□□□□ -1.03
HERC4-202ENST00000373700 SMIM23A6NLE4 172 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 DNM2P50570 870 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 SF3A3Q12874 501 aaKnown RBP eCLIP8.64□□□□□ -1.03
HERC4-202ENST00000373700 SAMD7Q7Z3H4 446 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 ZFPM1Q8IX07 1006 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 SMAP1Q8IYB5 467 aaPredicted RBP8.64□□□□□ -1.03
HERC4-202ENST00000373700 MYCT1Q8N699 235 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 TCHPQ9BT92 498 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 AMNQ9BXJ7 453 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 MRPL44Q9H9J2 332 aaKnown RBP8.64□□□□□ -1.03
HERC4-202ENST00000373700 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.64□□□□□ -1.03
HERC4-202ENST00000373700 MYO6Q9UM54 1294 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 DNM3Q9UQ16 869 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 MRC1P22897 1456 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 TCHHQ07283 1943 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 SFI1A8K8P3 1242 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 MCM3P25205 808 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 GJC1P36383 396 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 TRIM14Q14142 442 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 SMC1AQ14683 1233 aaKnown RBP8.64□□□□□ -1.03
HERC4-202ENST00000373700 ASPRV1Q53RT3 343 aa8.64□□□□□ -1.03
HERC4-202ENST00000373700 KLHL7Q8IXQ5 586 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms