RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 NAPGQ99747 312 aaPredicted RBP18.71■□□□□ 0.59
HDAC8-206ENST00000373571 TUBB2BQ9BVA1 445 aa18.71■□□□□ 0.59
HDAC8-206ENST00000373571 PUF60Q9UHX1 559 aaKnown RBP18.71■□□□□ 0.59
HDAC8-206ENST00000373571 POLRMTO00411 1230 aaKnown RBP18.7■□□□□ 0.58
HDAC8-206ENST00000373571 PPEF1O14829 653 aaPredicted RBP18.7■□□□□ 0.58
HDAC8-206ENST00000373571 SRGNP10124 158 aa18.7■□□□□ 0.58
HDAC8-206ENST00000373571 PPP1R2P41236 205 aa18.7■□□□□ 0.58
HDAC8-206ENST00000373571 PLA2G4AP47712 749 aa18.7■□□□□ 0.58
HDAC8-206ENST00000373571 CLEC10AQ8IUN9 316 aa18.7■□□□□ 0.58
HDAC8-206ENST00000373571 FAM114A1Q8IWE2 563 aa18.7■□□□□ 0.58
HDAC8-206ENST00000373571 EEF2KMTQ96G04 330 aa18.7■□□□□ 0.58
HDAC8-206ENST00000373571 CNOT6LQ96LI5 555 aaKnown RBP18.7■□□□□ 0.58
HDAC8-206ENST00000373571 MTMR9Q96QG7 549 aa18.7■□□□□ 0.58
HDAC8-206ENST00000373571 SNHG28P0DPA3 235 aa18.7■□□□□ 0.58
HDAC8-206ENST00000373571 TERF2Q15554 542 aa18.7■□□□□ 0.58
HDAC8-206ENST00000373571 TSR1Q2NL82 804 aaKnown RBP18.7■□□□□ 0.58
HDAC8-206ENST00000373571 CNNM4Q6P4Q7 775 aa18.7■□□□□ 0.58
HDAC8-206ENST00000373571 SP8Q8IXZ3 490 aa18.7■□□□□ 0.58
HDAC8-206ENST00000373571 GPCPD1Q9NPB8 672 aa18.7■□□□□ 0.58
HDAC8-206ENST00000373571 DDX4Q9NQI0 724 aaKnown RBP18.7■□□□□ 0.58
HDAC8-206ENST00000373571 LRWD1Q9UFC0 647 aa18.7■□□□□ 0.58
HDAC8-206ENST00000373571 ZHX1Q9UKY1 873 aaPredicted RBP18.7■□□□□ 0.58
HDAC8-206ENST00000373571 IGKV6D-41A0A0C4DH26 115 aa18.69■□□□□ 0.58
HDAC8-206ENST00000373571 ATP8B1O43520 1251 aa18.69■□□□□ 0.58
HDAC8-206ENST00000373571 SLC37A4O43826 429 aa18.69■□□□□ 0.58
HDAC8-206ENST00000373571 FXR2P51116 673 aaKnown RBP eCLIP18.69■□□□□ 0.58
HDAC8-206ENST00000373571 GRB10Q13322 594 aa18.69■□□□□ 0.58
HDAC8-206ENST00000373571 TMEM266Q2M3C6 531 aa18.69■□□□□ 0.58
HDAC8-206ENST00000373571 SV2BQ7L1I2 683 aa18.69■□□□□ 0.58
HDAC8-206ENST00000373571 TMC4Q7Z404 712 aa18.69■□□□□ 0.58
HDAC8-206ENST00000373571 COA1Q9GZY4 146 aa18.69■□□□□ 0.58
HDAC8-206ENST00000373571 REXO2Q9Y3B8 237 aaKnown RBP18.69■□□□□ 0.58
HDAC8-206ENST00000373571 KLRG2A4D1S0 409 aaPredicted RBP18.68■□□□□ 0.58
HDAC8-206ENST00000373571 ONECUT3O60422 494 aaPredicted RBP18.68■□□□□ 0.58
HDAC8-206ENST00000373571 TDP2O95551 362 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 TTLL1O95922 423 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 WDR59Q6PJI9 974 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 ZNF771Q7L3S4 317 aaPredicted RBP18.68■□□□□ 0.58
HDAC8-206ENST00000373571 KIAA0895Q8NCT3 520 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 SUGT1Q9Y2Z0 365 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 QSER1Q2KHR3 1735 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 TRIM21P19474 475 aaKnown RBP18.68■□□□□ 0.58
HDAC8-206ENST00000373571 MTIF2P46199 727 aaKnown RBP18.68■□□□□ 0.58
HDAC8-206ENST00000373571 TBC1D8BQ0IIM8 1120 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 COBLL1Q53SF7 1204 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 HPS3Q969F9 1004 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 CDK5RAP3Q96JB5 506 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 NUP58Q9BVL2 599 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 TTYH3Q9C0H2 523 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 ARFGAP3Q9NP61 516 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 BLOC1S4Q9NUP1 217 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 STK17AQ9UEE5 414 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 SERPINB13Q9UIV8 391 aa18.68■□□□□ 0.58
HDAC8-206ENST00000373571 EDIL3O43854 480 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 TBC1D8O95759 1140 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 SLC27A3Q5K4L6 730 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 CERS5Q8N5B7 392 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 LARP4BQ92615 738 aaKnown RBP18.67■□□□□ 0.58
HDAC8-206ENST00000373571 PNMA5Q96PV4 448 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 NOC4LQ9BVI4 516 aaKnown RBP18.67■□□□□ 0.58
HDAC8-206ENST00000373571 SLC39A2Q9NP94 309 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 SWAP70Q9UH65 585 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 AFF2P51816 1311 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 KIF20AO95235 890 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 KLK7P49862 253 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 ZNF543Q08ER8 600 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 MCM6Q14566 821 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 RAB34Q9BZG1 259 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 JMJD4Q9H9V9 463 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 AGPAT5Q9NUQ2 364 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 TRIM10Q9UDY6 481 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 GUCA1BQ9UMX6 200 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 ATP6V0A2Q9Y487 856 aa18.67■□□□□ 0.58
HDAC8-206ENST00000373571 PNMA6FA0A0J9YX94 578 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 POTEMA6NI47 508 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 MYMKA6NI61 221 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 SASH3O75995 380 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 TNNI2P48788 182 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 MEA1Q16626 185 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 MIIPQ5JXC2 388 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 PPP1R18Q6NYC8 613 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 ADGRF4Q8IZF3 695 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 RETREG2Q8NC44 543 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 PCMTD1Q96MG8 357 aaPredicted RBP18.66■□□□□ 0.58
HDAC8-206ENST00000373571 SEMA6BQ9H3T3 888 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 HAUS4Q9H6D7 363 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 RIC8AQ9NPQ8 531 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 USP40Q9NVE5 1235 aa18.66■□□□□ 0.58
HDAC8-206ENST00000373571 RASSF10A6NK89 507 aa18.65■□□□□ 0.58
HDAC8-206ENST00000373571 TFRCP02786 760 aaKnown RBP18.65■□□□□ 0.58
HDAC8-206ENST00000373571 WHAMMP3Q1A5X7 153 aa18.65■□□□□ 0.58
HDAC8-206ENST00000373571 UNC13DQ70J99 1090 aa18.65■□□□□ 0.58
HDAC8-206ENST00000373571 MXD3Q9BW11 206 aa18.65■□□□□ 0.58
HDAC8-206ENST00000373571 ZC3H12CQ9C0D7 883 aaKnown RBP18.65■□□□□ 0.58
HDAC8-206ENST00000373571 CCDC151A5D8V7 595 aa18.65■□□□□ 0.58
HDAC8-206ENST00000373571 SHMT1P34896 483 aa18.65■□□□□ 0.58
HDAC8-206ENST00000373571 HERVK_113P62684 666 aa18.65■□□□□ 0.58
HDAC8-206ENST00000373571 PDIA5Q14554 519 aa18.65■□□□□ 0.58
HDAC8-206ENST00000373571 BRD3Q15059 726 aa18.65■□□□□ 0.58
HDAC8-206ENST00000373571 UBE2SQ16763 222 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms