RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 ALDH5A1P51649 535 aaPredicted RBP13.92□□□□□ -0.18
HDAC8-201ENST00000373554 RCAN1P53805 252 aa13.92□□□□□ -0.18
HDAC8-201ENST00000373554 ACVR2BQ13705 512 aa13.92□□□□□ -0.18
HDAC8-201ENST00000373554 RTN1Q16799 776 aa13.92□□□□□ -0.18
HDAC8-201ENST00000373554 TMTC3Q6ZXV5 915 aa13.92□□□□□ -0.18
HDAC8-201ENST00000373554 NECAB2Q7Z6G3 386 aa13.92□□□□□ -0.18
HDAC8-201ENST00000373554 UBE2Q1Q7Z7E8 422 aa13.92□□□□□ -0.18
HDAC8-201ENST00000373554 DNERQ8NFT8 737 aa13.92□□□□□ -0.18
HDAC8-201ENST00000373554 BRF1Q92994 677 aa13.92□□□□□ -0.18
HDAC8-201ENST00000373554 HTATIP2Q9BUP3 242 aa13.92□□□□□ -0.18
HDAC8-201ENST00000373554 BRPF3Q9ULD4 1205 aa13.92□□□□□ -0.18
HDAC8-201ENST00000373554 FAM184BQ9ULE4 1060 aa13.92□□□□□ -0.18
HDAC8-201ENST00000373554 CYP46A1Q9Y6A2 500 aa13.92□□□□□ -0.18
HDAC8-201ENST00000373554 GOLGA8AA7E2F4 631 aa13.91□□□□□ -0.18
HDAC8-201ENST00000373554 GOLGA8BA8MQT2 603 aa13.91□□□□□ -0.18
HDAC8-201ENST00000373554 B4DLN1 442 aa13.91□□□□□ -0.18
HDAC8-201ENST00000373554 CFBP00751 764 aa13.91□□□□□ -0.18
HDAC8-201ENST00000373554 MRPL12P52815 198 aaKnown RBP13.91□□□□□ -0.18
HDAC8-201ENST00000373554 PRPF38BQ5VTL8 546 aaKnown RBP13.91□□□□□ -0.18
HDAC8-201ENST00000373554 ANO1Q5XXA6 986 aa13.91□□□□□ -0.18
HDAC8-201ENST00000373554 RUFY3Q7L099 469 aa13.91□□□□□ -0.18
HDAC8-201ENST00000373554 FBXL16Q8N461 479 aa13.91□□□□□ -0.18
HDAC8-201ENST00000373554 SRBD1Q8N5C6 995 aaKnown RBP13.91□□□□□ -0.18
HDAC8-201ENST00000373554 ARRDC4Q8NCT1 418 aa13.91□□□□□ -0.18
HDAC8-201ENST00000373554 DIS3LQ8TF46 1054 aaKnown RBP13.91□□□□□ -0.18
HDAC8-201ENST00000373554 PAWRQ96IZ0 340 aaKnown RBP13.91□□□□□ -0.18
HDAC8-201ENST00000373554 PURBQ96QR8 312 aaKnown RBP13.91□□□□□ -0.18
HDAC8-201ENST00000373554 TM6SF1Q9BZW5 370 aa13.91□□□□□ -0.18
HDAC8-201ENST00000373554 ZSWIM6Q9HCJ5 1215 aa13.91□□□□□ -0.18
HDAC8-201ENST00000373554 XPNPEP3Q9NQH7 507 aa13.91□□□□□ -0.18
HDAC8-201ENST00000373554 LCTP09848 1927 aa13.91□□□□□ -0.18
HDAC8-201ENST00000373554 SMCHD1A6NHR9 2005 aa13.91□□□□□ -0.18
HDAC8-201ENST00000373554 LRRC37A2A6NM11 1700 aa13.9□□□□□ -0.18
HDAC8-201ENST00000373554 KBTBD13C9JR72 458 aa13.9□□□□□ -0.18
HDAC8-201ENST00000373554 DNM1LO00429 736 aa13.9□□□□□ -0.18
HDAC8-201ENST00000373554 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
HDAC8-201ENST00000373554 METAP2P50579 478 aaKnown RBP eCLIP13.9□□□□□ -0.18
HDAC8-201ENST00000373554 ANAPC15P60006 121 aa13.9□□□□□ -0.18
HDAC8-201ENST00000373554 APOBRQ0VD83 1088 aa13.9□□□□□ -0.18
HDAC8-201ENST00000373554 CCDC144BQ3MJ40 725 aa13.9□□□□□ -0.18
HDAC8-201ENST00000373554 CMTR1Q8N1G2 835 aaKnown RBP13.9□□□□□ -0.18
HDAC8-201ENST00000373554 CCDC82Q8N4S0 544 aa13.9□□□□□ -0.18
HDAC8-201ENST00000373554 SAMD3Q8N6K7 520 aa13.9□□□□□ -0.18
HDAC8-201ENST00000373554 SYTL5Q8TDW5 730 aaPredicted RBP13.9□□□□□ -0.18
HDAC8-201ENST00000373554 AGXT2Q9BYV1 514 aa13.9□□□□□ -0.18
HDAC8-201ENST00000373554 UPF3BQ9BZI7 483 aaKnown RBP13.9□□□□□ -0.18
HDAC8-201ENST00000373554 C11orf49Q9H6J7 331 aa13.9□□□□□ -0.18
HDAC8-201ENST00000373554 MAP3K20Q9NYL2 800 aaKnown RBP13.9□□□□□ -0.18
HDAC8-201ENST00000373554 CCDC196A0A1B0GTZ2 297 aa13.89□□□□□ -0.19
HDAC8-201ENST00000373554 OPLAHO14841 1288 aa13.89□□□□□ -0.19
HDAC8-201ENST00000373554 HSD17B4P51659 736 aa13.89□□□□□ -0.19
HDAC8-201ENST00000373554 GHRHRQ02643 423 aa13.89□□□□□ -0.19
HDAC8-201ENST00000373554 PDE4DQ08499 809 aa13.89□□□□□ -0.19
HDAC8-201ENST00000373554 PPP2R5BQ15173 497 aa13.89□□□□□ -0.19
HDAC8-201ENST00000373554 EEPD1Q7L9B9 569 aa13.89□□□□□ -0.19
HDAC8-201ENST00000373554 RNF180Q86T96 592 aa13.89□□□□□ -0.19
HDAC8-201ENST00000373554 FBXO16Q8IX29 292 aaPredicted RBP13.89□□□□□ -0.19
HDAC8-201ENST00000373554 MORC4Q8TE76 937 aa13.89□□□□□ -0.19
HDAC8-201ENST00000373554 NSUN6Q8TEA1 469 aaKnown RBP13.89□□□□□ -0.19
HDAC8-201ENST00000373554 KATNBL1Q9H079 304 aa13.89□□□□□ -0.19
HDAC8-201ENST00000373554 VTA1Q9NP79 307 aa13.89□□□□□ -0.19
HDAC8-201ENST00000373554 MCM3APO60318 1980 aa13.89□□□□□ -0.19
HDAC8-201ENST00000373554 CNTNAP5Q8WYK1 1306 aa13.89□□□□□ -0.19
HDAC8-201ENST00000373554 NID2Q14112 1375 aa13.88□□□□□ -0.19
HDAC8-201ENST00000373554 GCOM1H8Y6P7 765 aaPredicted RBP13.88□□□□□ -0.19
HDAC8-201ENST00000373554 DUSP11O75319 330 aaKnown RBP13.88□□□□□ -0.19
HDAC8-201ENST00000373554 POLR2MP0CAP2 368 aa13.88□□□□□ -0.19
HDAC8-201ENST00000373554 MNX1P50219 401 aaPredicted RBP13.88□□□□□ -0.19
HDAC8-201ENST00000373554 GJC2Q5T442 439 aaPredicted RBP13.88□□□□□ -0.19
HDAC8-201ENST00000373554 TBC1D5Q92609 795 aa13.88□□□□□ -0.19
HDAC8-201ENST00000373554 LENG1Q96BZ8 264 aaPredicted RBP13.88□□□□□ -0.19
HDAC8-201ENST00000373554 RMDN3Q96TC7 470 aa13.88□□□□□ -0.19
HDAC8-201ENST00000373554 SPC25Q9HBM1 224 aa13.88□□□□□ -0.19
HDAC8-201ENST00000373554 DDX49Q9Y6V7 483 aaKnown RBP13.88□□□□□ -0.19
HDAC8-201ENST00000373554 SYNRGQ9UMZ2 1314 aa13.88□□□□□ -0.19
HDAC8-201ENST00000373554 DLL1O00548 723 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 PGK1P00558 417 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 COL6A1P12109 1028 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 EDNRBP24530 442 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 ADCYAP1R1P41586 468 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 TNFAIP2Q03169 654 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 LRRC41Q15345 812 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 ARHGEF16Q5VV41 709 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 NOL8Q76FK4 1167 aaKnown RBP13.87□□□□□ -0.19
HDAC8-201ENST00000373554 HEATR3Q7Z4Q2 680 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 DPF3Q92784 378 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 TAAR1Q96RJ0 339 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 IWS1Q96ST2 819 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 PDRG1Q9NUG6 133 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 COL20A1Q9P218 1284 aa13.87□□□□□ -0.19
HDAC8-201ENST00000373554 BAZ2BQ9UIF8 2168 aaKnown RBP13.86□□□□□ -0.19
HDAC8-201ENST00000373554 hCG_1642624A0A1W2PR95 340 aa13.86□□□□□ -0.19
HDAC8-201ENST00000373554 ADAMTS4O75173 837 aa13.86□□□□□ -0.19
HDAC8-201ENST00000373554 EIF2AK2P19525 551 aaKnown RBP13.86□□□□□ -0.19
HDAC8-201ENST00000373554 CDC27P30260 824 aa13.86□□□□□ -0.19
HDAC8-201ENST00000373554 HOXA13P31271 388 aaPredicted RBP13.86□□□□□ -0.19
HDAC8-201ENST00000373554 EVCP57679 992 aa13.86□□□□□ -0.19
HDAC8-201ENST00000373554 TOB2Q14106 344 aaPredicted RBP13.86□□□□□ -0.19
HDAC8-201ENST00000373554 C8orf34Q49A92 452 aa13.86□□□□□ -0.19
HDAC8-201ENST00000373554 IQSEC1Q6DN90 963 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms