RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 CDK11BP21127 795 aaKnown RBP22.08■■□□□ 1.13
HDAC1-201ENST00000373548 NBPF9Q3BBW0 867 aa22.08■■□□□ 1.13
HDAC1-201ENST00000373548 ZNF658Q5TYW1 1059 aaPredicted RBP22.08■■□□□ 1.13
HDAC1-201ENST00000373548 VSTM4Q8IW00 320 aa22.08■■□□□ 1.13
HDAC1-201ENST00000373548 ACER1Q8TDN7 264 aa22.08■■□□□ 1.13
HDAC1-201ENST00000373548 AMNQ9BXJ7 453 aa22.08■■□□□ 1.13
HDAC1-201ENST00000373548 ARHGEF10LQ9HCE6 1279 aa22.08■■□□□ 1.13
HDAC1-201ENST00000373548 TBC1D12O60347 775 aa22.07■■□□□ 1.12
HDAC1-201ENST00000373548 MYL1P05976 194 aa22.07■■□□□ 1.12
HDAC1-201ENST00000373548 IKQ13123 557 aaPredicted RBP22.07■■□□□ 1.12
HDAC1-201ENST00000373548 DNTTIP2Q5QJE6 756 aaKnown RBP22.07■■□□□ 1.12
HDAC1-201ENST00000373548 SPICE1Q8N0Z3 855 aa22.07■■□□□ 1.12
HDAC1-201ENST00000373548 CCDC150Q8NCX0 1101 aa22.07■■□□□ 1.12
HDAC1-201ENST00000373548 JDP2Q8WYK2 163 aa22.07■■□□□ 1.12
HDAC1-201ENST00000373548 MAGEF1Q9HAY2 307 aa22.07■■□□□ 1.12
HDAC1-201ENST00000373548 PGAP2Q9UHJ9 254 aa22.07■■□□□ 1.12
HDAC1-201ENST00000373548 CTNND2Q9UQB3 1225 aa22.07■■□□□ 1.12
HDAC1-201ENST00000373548 KIAA1755Q5JYT7 1200 aa22.07■■□□□ 1.12
HDAC1-201ENST00000373548 TMX2Q9Y320 296 aa22.07■■□□□ 1.12
HDAC1-201ENST00000373548 KLRC4O43908 158 aa22.06■■□□□ 1.12
HDAC1-201ENST00000373548 FBXO11Q86XK2 927 aa22.06■■□□□ 1.12
HDAC1-201ENST00000373548 MYOZ2Q9NPC6 264 aa22.06■■□□□ 1.12
HDAC1-201ENST00000373548 PPP1R1BQ9UD71 204 aaPredicted RBP22.06■■□□□ 1.12
HDAC1-201ENST00000373548 LRWD1Q9UFC0 647 aa22.06■■□□□ 1.12
HDAC1-201ENST00000373548 DDX25Q9UHL0 483 aaKnown RBP22.06■■□□□ 1.12
HDAC1-201ENST00000373548 GDAQ9Y2T3 454 aa22.06■■□□□ 1.12
HDAC1-201ENST00000373548 MEIS2O14770 477 aa22.06■■□□□ 1.12
HDAC1-201ENST00000373548 GCFC2P16383 781 aaKnown RBP22.06■■□□□ 1.12
HDAC1-201ENST00000373548 KCNB1Q14721 858 aa22.06■■□□□ 1.12
HDAC1-201ENST00000373548 TMEM266Q2M3C6 531 aa22.06■■□□□ 1.12
HDAC1-201ENST00000373548 CDKAL1Q5VV42 579 aa22.06■■□□□ 1.12
HDAC1-201ENST00000373548 MIGA2Q7L4E1 593 aa22.06■■□□□ 1.12
HDAC1-201ENST00000373548 ANO3Q9BYT9 981 aa22.06■■□□□ 1.12
HDAC1-201ENST00000373548 SRCAPQ6ZRS2 3230 aa22.06■■□□□ 1.12
HDAC1-201ENST00000373548 PTPN21Q16825 1174 aa22.05■■□□□ 1.12
HDAC1-201ENST00000373548 KMT5BQ4FZB7 885 aa22.05■■□□□ 1.12
HDAC1-201ENST00000373548 HAS1Q92839 578 aa22.05■■□□□ 1.12
HDAC1-201ENST00000373548 PRR12Q9ULL5 1215 aa22.05■■□□□ 1.12
HDAC1-201ENST00000373548 SFPQP23246 707 aaKnown RBP eCLIP22.04■■□□□ 1.12
HDAC1-201ENST00000373548 GRB10Q13322 594 aa22.04■■□□□ 1.12
HDAC1-201ENST00000373548 PDIA5Q14554 519 aa22.04■■□□□ 1.12
HDAC1-201ENST00000373548 DHX8Q14562 1220 aaKnown RBP22.04■■□□□ 1.12
HDAC1-201ENST00000373548 USH1GQ495M9 461 aa22.04■■□□□ 1.12
HDAC1-201ENST00000373548 APTXQ7Z2E3 356 aaKnown RBP22.04■■□□□ 1.12
HDAC1-201ENST00000373548 CALML4Q96GE6 196 aa22.04■■□□□ 1.12
HDAC1-201ENST00000373548 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.04■■□□□ 1.12
HDAC1-201ENST00000373548 RWDD2AQ9UIY3 292 aa22.04■■□□□ 1.12
HDAC1-201ENST00000373548 SMCHD1A6NHR9 2005 aa22.04■■□□□ 1.12
HDAC1-201ENST00000373548 POTEMA6NI47 508 aa22.04■■□□□ 1.12
HDAC1-201ENST00000373548 P2RX7Q99572 595 aaKnown RBP22.04■■□□□ 1.12
HDAC1-201ENST00000373548 GOPCQ9HD26 462 aa22.04■■□□□ 1.12
HDAC1-201ENST00000373548 TAL1P17542 331 aaPredicted RBP22.03■■□□□ 1.12
HDAC1-201ENST00000373548 PRCPP42785 496 aa22.03■■□□□ 1.12
HDAC1-201ENST00000373548 PAK1Q13153 545 aa22.03■■□□□ 1.12
HDAC1-201ENST00000373548 AP3B2Q13367 1082 aa22.03■■□□□ 1.12
HDAC1-201ENST00000373548 TNIP1Q15025 636 aa22.03■■□□□ 1.12
HDAC1-201ENST00000373548 PNMA5Q96PV4 448 aa22.03■■□□□ 1.12
HDAC1-201ENST00000373548 RAB34Q9BZG1 259 aa22.03■■□□□ 1.12
HDAC1-201ENST00000373548 TRIM9Q9C026 710 aa22.03■■□□□ 1.12
HDAC1-201ENST00000373548 COBLO75128 1261 aa22.03■■□□□ 1.12
HDAC1-201ENST00000373548 RHOBTB3O94955 611 aa22.03■■□□□ 1.12
HDAC1-201ENST00000373548 CAP2P40123 477 aa22.03■■□□□ 1.12
HDAC1-201ENST00000373548 MMP14P50281 582 aa22.03■■□□□ 1.12
HDAC1-201ENST00000373548 MAP3K10Q02779 954 aa22.03■■□□□ 1.12
HDAC1-201ENST00000373548 NELFBQ8WX92 580 aa22.03■■□□□ 1.12
HDAC1-201ENST00000373548 NAP1L4Q99733 375 aaKnown RBP22.03■■□□□ 1.12
HDAC1-201ENST00000373548 A0A1B0GTH6 734 aa22.02■■□□□ 1.12
HDAC1-201ENST00000373548 USP11P51784 963 aa22.02■■□□□ 1.12
HDAC1-201ENST00000373548 STAT2P52630 851 aa22.02■■□□□ 1.12
HDAC1-201ENST00000373548 TERF1P54274 439 aa22.02■■□□□ 1.12
HDAC1-201ENST00000373548 ZNF280AP59817 542 aaPredicted RBP22.02■■□□□ 1.12
HDAC1-201ENST00000373548 SEMA3FQ13275 785 aa22.02■■□□□ 1.12
HDAC1-201ENST00000373548 NR1I3Q14994 352 aa22.02■■□□□ 1.12
HDAC1-201ENST00000373548 FAM83BQ5T0W9 1011 aa22.02■■□□□ 1.12
HDAC1-201ENST00000373548 CRYGNQ8WXF5 182 aa22.02■■□□□ 1.12
HDAC1-201ENST00000373548 C7orf25Q9BPX7 421 aa22.02■■□□□ 1.12
HDAC1-201ENST00000373548 MAPK8IP1Q9UQF2 711 aa22.02■■□□□ 1.12
HDAC1-201ENST00000373548 ATAD5Q96QE3 1844 aa22.02■■□□□ 1.11
HDAC1-201ENST00000373548 R3HDM1Q15032 1099 aaKnown RBP22.01■■□□□ 1.11
HDAC1-201ENST00000373548 ADSSL1Q8N142 457 aa22.01■■□□□ 1.11
HDAC1-201ENST00000373548 GJA10Q969M2 543 aa22.01■■□□□ 1.11
HDAC1-201ENST00000373548 NUDT12Q9BQG2 462 aa22.01■■□□□ 1.11
HDAC1-201ENST00000373548 BLOC1S4Q9NUP1 217 aa22.01■■□□□ 1.11
HDAC1-201ENST00000373548 SCAF8Q9UPN6 1271 aaKnown RBP22.01■■□□□ 1.11
HDAC1-201ENST00000373548 BCS1LQ9Y276 419 aa22.01■■□□□ 1.11
HDAC1-201ENST00000373548 OPLAHO14841 1288 aa22.01■■□□□ 1.11
HDAC1-201ENST00000373548 EGFRP00533 1210 aa22.01■■□□□ 1.11
HDAC1-201ENST00000373548 MBOAT7Q96N66 472 aa22.01■■□□□ 1.11
HDAC1-201ENST00000373548 SGIP1Q9BQI5 828 aa22.01■■□□□ 1.11
HDAC1-201ENST00000373548 STK17AQ9UEE5 414 aa22.01■■□□□ 1.11
HDAC1-201ENST00000373548 CYP3A7-CYP3A51PA0A087WV96 503 aa22■■□□□ 1.11
HDAC1-201ENST00000373548 CYP3A7P24462 503 aa22■■□□□ 1.11
HDAC1-201ENST00000373548 TBX2Q13207 712 aaPredicted RBP22■■□□□ 1.11
HDAC1-201ENST00000373548 MCTP2Q6DN12 878 aa22■■□□□ 1.11
HDAC1-201ENST00000373548 GIMAP8Q8ND71 665 aaPredicted RBP22■■□□□ 1.11
HDAC1-201ENST00000373548 SNX29Q8TEQ0 813 aa22■■□□□ 1.11
HDAC1-201ENST00000373548 VCPKMTQ9H867 229 aa22■■□□□ 1.11
HDAC1-201ENST00000373548 RASA3Q14644 834 aa22■■□□□ 1.11
HDAC1-201ENST00000373548 TPD52L1Q16890 204 aaPredicted RBP22■■□□□ 1.11
HDAC1-201ENST00000373548 CD2APQ9Y5K6 639 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms