RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 DNAAF2Q9NVR5 837 aaKnown RBP9.13□□□□□ -0.95
GARNL3-201ENST00000373386 ZMAT5Q9UDW3 170 aaKnown RBP9.13□□□□□ -0.95
GARNL3-201ENST00000373386 CEP131Q9UPN4 1083 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 SLC12A7Q9Y666 1083 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 DUOX1Q9NRD9 1551 aa9.13□□□□□ -0.95
GARNL3-201ENST00000373386 MROH7-TTC4A0A0A0MT08 1334 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 PABPN1LA6NDY0 278 aaKnown RBP9.12□□□□□ -0.95
GARNL3-201ENST00000373386 SPDYE3A6NKU9 549 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 GOLGA8AA7E2F4 631 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 GSG1L2A8MUP6 293 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 ATP8B1O43520 1251 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 DEXIO95424 95 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 CDC27P30260 824 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 UBASH3AP57075 661 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 TMEM67Q5HYA8 995 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 TMCO3Q6UWJ1 677 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 PI16Q6UXB8 463 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 NOSTRINQ8IVI9 506 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 CENPOQ9BU64 300 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 UTP14AQ9BVJ6 771 aaKnown RBP9.12□□□□□ -0.95
GARNL3-201ENST00000373386 NAPBQ9H115 298 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 EPB41L4AQ9HCS5 686 aaPredicted RBP9.12□□□□□ -0.95
GARNL3-201ENST00000373386 BTG4Q9NY30 223 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 DNAI1Q9UI46 699 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 COL24A1Q17RW2 1714 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 CACNA1SQ13698 1873 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 GOLGA6L9A6NEM1 432 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 NPHP1O15259 732 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 RANBP6O60518 1105 aaKnown RBP9.12□□□□□ -0.95
GARNL3-201ENST00000373386 MTA2O94776 668 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 BMP15O95972 392 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 SERPINC1P01008 464 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 WASHC5Q12768 1159 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 GNPTABQ3T906 1256 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 SHC4Q6S5L8 630 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 OLFM4Q6UX06 510 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 MFSD6Q6ZSS7 791 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 KRI1Q8N9T8 703 aaKnown RBP9.12□□□□□ -0.95
GARNL3-201ENST00000373386 SMYD1Q8NB12 490 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 DHX36Q9H2U1 1008 aaKnown RBP9.12□□□□□ -0.95
GARNL3-201ENST00000373386 DACH1Q9UI36 760 aa9.12□□□□□ -0.95
GARNL3-201ENST00000373386 EFCAB8A8MWE9 144 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 TOM1O60784 492 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 IDH1O75874 414 aaKnown RBP9.11□□□□□ -0.95
GARNL3-201ENST00000373386 MDM2Q00987 491 aaPredicted RBP9.11□□□□□ -0.95
GARNL3-201ENST00000373386 RASGRF1Q13972 1273 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 SAFBQ15424 915 aaKnown RBP eCLIP9.11□□□□□ -0.95
GARNL3-201ENST00000373386 INTS5Q6P9B9 1019 aaKnown RBP9.11□□□□□ -0.95
GARNL3-201ENST00000373386 VSTM4Q8IW00 320 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 TRIM22Q8IYM9 498 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 ZC3H15Q8WU90 426 aaKnown RBP9.11□□□□□ -0.95
GARNL3-201ENST00000373386 BRD8Q9H0E9 1235 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 BATF3Q9NR55 127 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 CCDC87Q9NVE4 849 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 DYTNA2CJ06 578 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 B4E1Z4 1266 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 SEMA3EO15041 775 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 FESP07332 822 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 TOP1P11387 765 aaKnown RBP9.11□□□□□ -0.95
GARNL3-201ENST00000373386 CFAP100Q494V2 611 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 CWF19L1Q69YN2 538 aaKnown RBP9.11□□□□□ -0.95
GARNL3-201ENST00000373386 LRRC49Q8IUZ0 686 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 STK11IPQ8N1F8 1099 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 ANKK1Q8NFD2 765 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 OR8K1Q8NGG5 319 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 WHAMMQ8TF30 809 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 SMARCC1Q92922 1105 aaPredicted RBP9.11□□□□□ -0.95
GARNL3-201ENST00000373386 CABS1Q96KC9 395 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 OSBPL9Q96SU4 736 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 RNF26Q9BY78 433 aaPredicted RBP9.11□□□□□ -0.95
GARNL3-201ENST00000373386 HSD3B7Q9H2F3 369 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 ZSWIM5Q9P217 1185 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 ARHGAP6O43182 974 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 TADA3O75528 432 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 NPM3O75607 178 aaKnown RBP9.11□□□□□ -0.95
GARNL3-201ENST00000373386 CAMTA2O94983 1202 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 PTPREP23469 700 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 SARSP49591 514 aaKnown RBP9.11□□□□□ -0.95
GARNL3-201ENST00000373386 TRIM65Q6PJ69 517 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 SLC30A9Q6PML9 568 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 SPATS2Q86XZ4 545 aaKnown RBP9.11□□□□□ -0.95
GARNL3-201ENST00000373386 LRRN4CLQ8ND94 238 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 SPATA20Q8TB22 786 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 CENPTQ96BT3 561 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 SPDL1Q96EA4 605 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 DHTKD1Q96HY7 919 aaPredicted RBP9.11□□□□□ -0.95
GARNL3-201ENST00000373386 MPHOSPH8Q99549 860 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 OSBPL10Q9BXB5 764 aa9.11□□□□□ -0.95
GARNL3-201ENST00000373386 ENO4A6NNW6 628 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 NTSR2O95665 410 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 ATP1A3P13637 1013 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 IGHMBP2P38935 993 aaKnown RBP9.1□□□□□ -0.95
GARNL3-201ENST00000373386 MATR3P43243 847 aaKnown RBP eCLIP9.1□□□□□ -0.95
GARNL3-201ENST00000373386 PABPC4Q13310 644 aaKnown RBP eCLIP9.1□□□□□ -0.95
GARNL3-201ENST00000373386 WLSQ5T9L3 541 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 REXO1L1PQ8IX06 675 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 MAGEB6Q8N7X4 407 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 MLKLQ8NB16 471 aa9.1□□□□□ -0.95
GARNL3-201ENST00000373386 CTNNBL1Q8WYA6 563 aaPredicted RBP9.1□□□□□ -0.95
GARNL3-201ENST00000373386 SLC35B4Q969S0 331 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms