RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 RBM28Q9NW13 759 aaKnown RBP11.02□□□□□ -0.64
ITM2A-201ENST00000373298 MCM3APO60318 1980 aa11.02□□□□□ -0.65
ITM2A-201ENST00000373298 SLC34A2O95436 690 aa11.02□□□□□ -0.65
ITM2A-201ENST00000373298 IFNAR1P17181 557 aa11.02□□□□□ -0.65
ITM2A-201ENST00000373298 CTCFP49711 727 aaPredicted RBP11.02□□□□□ -0.65
ITM2A-201ENST00000373298 WWC2Q6AWC2 1192 aa11.02□□□□□ -0.65
ITM2A-201ENST00000373298 GPR142Q7Z601 462 aa11.02□□□□□ -0.65
ITM2A-201ENST00000373298 DDX11Q96FC9 970 aa11.02□□□□□ -0.65
ITM2A-201ENST00000373298 TRERF1Q96PN7 1200 aa11.02□□□□□ -0.65
ITM2A-201ENST00000373298 SLC26A6Q9BXS9 759 aa11.02□□□□□ -0.65
ITM2A-201ENST00000373298 RNF146Q9NTX7 359 aa11.02□□□□□ -0.65
ITM2A-201ENST00000373298 GJD2Q9UKL4 321 aa11.02□□□□□ -0.65
ITM2A-201ENST00000373298 PNMA6FA0A0J9YX94 578 aa11.01□□□□□ -0.65
ITM2A-201ENST00000373298 C2orf72A6NCS6 295 aa11.01□□□□□ -0.65
ITM2A-201ENST00000373298 FMNL1O95466 1100 aaPredicted RBP11.01□□□□□ -0.65
ITM2A-201ENST00000373298 NUDT7P0C024 238 aa11.01□□□□□ -0.65
ITM2A-201ENST00000373298 GNAQP50148 359 aa11.01□□□□□ -0.65
ITM2A-201ENST00000373298 OAZ1P54368 228 aa11.01□□□□□ -0.65
ITM2A-201ENST00000373298 PRKCZQ05513 592 aa11.01□□□□□ -0.65
ITM2A-201ENST00000373298 FBXO11Q86XK2 927 aa11.01□□□□□ -0.65
ITM2A-201ENST00000373298 GTF3C2Q8WUA4 911 aaPredicted RBP11.01□□□□□ -0.65
ITM2A-201ENST00000373298 RRP36Q96EU6 259 aaKnown RBP11.01□□□□□ -0.65
ITM2A-201ENST00000373298 LZTS2Q9BRK4 669 aa11.01□□□□□ -0.65
ITM2A-201ENST00000373298 MFRPQ9BY79 579 aa11.01□□□□□ -0.65
ITM2A-201ENST00000373298 CTDP1Q9Y5B0 961 aaPredicted RBP11.01□□□□□ -0.65
ITM2A-201ENST00000373298 PCDHA1Q9Y5I3 950 aa11.01□□□□□ -0.65
ITM2A-201ENST00000373298 ASTN1O14525 1302 aa11.01□□□□□ -0.65
ITM2A-201ENST00000373298 PLXNA1Q9UIW2 1896 aa11.01□□□□□ -0.65
ITM2A-201ENST00000373298 TNPO2O14787 897 aaKnown RBP11□□□□□ -0.65
ITM2A-201ENST00000373298 COBLO75128 1261 aa11□□□□□ -0.65
ITM2A-201ENST00000373298 SMARCA1P28370 1054 aa11□□□□□ -0.65
ITM2A-201ENST00000373298 CNTN2Q02246 1040 aa11□□□□□ -0.65
ITM2A-201ENST00000373298 NOM1Q5C9Z4 860 aaKnown RBP11□□□□□ -0.65
ITM2A-201ENST00000373298 SLC30A10Q6XR72 485 aa11□□□□□ -0.65
ITM2A-201ENST00000373298 OTOP1Q7RTM1 612 aa11□□□□□ -0.65
ITM2A-201ENST00000373298 A1CFQ9NQ94 594 aaKnown RBP11□□□□□ -0.65
ITM2A-201ENST00000373298 LHX6Q9UPM6 363 aa11□□□□□ -0.65
ITM2A-201ENST00000373298 CCDC196A0A1B0GTZ2 297 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 PTPDC1A2A3K4 754 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 STXBP3O00186 592 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 CPLX1O14810 134 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 PRPF3O43395 683 aaKnown RBP10.99□□□□□ -0.65
ITM2A-201ENST00000373298 FDX1P10109 184 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 PTPREP23469 700 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 ADORA2AP29274 412 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 FOSBP53539 338 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 CCL14Q16627 93 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 PFKFB3Q16875 520 aaPredicted RBP10.99□□□□□ -0.65
ITM2A-201ENST00000373298 MORN1Q5T089 497 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 HEATR3Q7Z4Q2 680 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 PLEKHH3Q7Z736 793 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 SHCBP1Q8NEM2 672 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 USP6NLQ92738 828 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 FGD4Q96M96 766 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 AMNQ9BXJ7 453 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 FLRT1Q9NZU1 646 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 VPS54Q9P1Q0 977 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 COL20A1Q9P218 1284 aa10.99□□□□□ -0.65
ITM2A-201ENST00000373298 RBBP6Q7Z6E9 1792 aaKnown RBP10.99□□□□□ -0.65
ITM2A-201ENST00000373298 SLC25A27O95847 323 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 MAPK4P31152 587 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 HOXA13P31271 388 aaPredicted RBP10.98□□□□□ -0.65
ITM2A-201ENST00000373298 FLT3LGP49771 235 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 FCGRTP55899 365 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 CCNA1P78396 465 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 BAATQ14032 418 aaPredicted RBP10.98□□□□□ -0.65
ITM2A-201ENST00000373298 GRB14Q14449 540 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 PPP2R5BQ15173 497 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 NSMFQ6X4W1 530 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 NPLOC4Q8TAT6 608 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 ZSCAN31Q96LW9 406 aaPredicted RBP10.98□□□□□ -0.65
ITM2A-201ENST00000373298 MMP19Q99542 508 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 RNF26Q9BY78 433 aaPredicted RBP10.98□□□□□ -0.65
ITM2A-201ENST00000373298 MROH8Q9H579 483 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 ACAD9Q9H845 621 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 CYP39A1Q9NYL5 469 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 TRIM17Q9Y577 477 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 KIAA0100Q14667 2235 aaKnown RBP10.98□□□□□ -0.65
ITM2A-201ENST00000373298 SCG2P13521 617 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 CYP2B6P20813 491 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 RPS6P62753 249 aaKnown RBP10.98□□□□□ -0.65
ITM2A-201ENST00000373298 SSRP1Q08945 709 aaKnown RBP10.98□□□□□ -0.65
ITM2A-201ENST00000373298 TRIM32Q13049 653 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 UBE2SQ16763 222 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 IFFO2Q5TF58 517 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 USP17L6PQ6QN14 398 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 CHST13Q8NET6 341 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 SMARCC2Q8TAQ2 1214 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 ERO1AQ96HE7 468 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 SH2B1Q9NRF2 756 aaPredicted RBP10.98□□□□□ -0.65
ITM2A-201ENST00000373298 BARHL2Q9NY43 387 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 ORC3Q9UBD5 711 aaPredicted RBP10.98□□□□□ -0.65
ITM2A-201ENST00000373298 SEC63Q9UGP8 760 aaKnown RBP10.98□□□□□ -0.65
ITM2A-201ENST00000373298 KCNJ14Q9UNX9 436 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 PCDHGA4Q9Y5G9 962 aa10.98□□□□□ -0.65
ITM2A-201ENST00000373298 ZNF236Q9UL36 1845 aa10.97□□□□□ -0.65
ITM2A-201ENST00000373298 ABCB11O95342 1321 aa10.97□□□□□ -0.65
ITM2A-201ENST00000373298 DNAJC25-GNG10A0A024R161 153 aa10.97□□□□□ -0.65
ITM2A-201ENST00000373298 SOWAHBA6NEL2 793 aa10.97□□□□□ -0.65
ITM2A-201ENST00000373298 MEIS2O14770 477 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms