RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 KLHL33A6NCF5 533 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 TPP2P29144 1249 aaPredicted RBP12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 AMOTQ4VCS5 1084 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 TCP11X2Q5H9J9 407 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 BZW1Q7L1Q6 419 aaKnown RBP12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 PEX26Q7Z412 305 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 CTTNBP2NLQ9P2B4 639 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 PCDHA13Q9Y5I0 950 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 LRRC7Q96NW7 1537 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 CAMSAP1Q5T5Y3 1602 aa12.32□□□□□ -0.44
SYNPO2L-201ENST00000372873 ACCSLQ4AC99 568 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 SPTY2D1Q68D10 685 aaPredicted RBP12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 KRT28Q7Z3Y7 464 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 ADAT2Q7Z6V5 191 aaKnown RBP12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 SYMPKQ92797 1274 aaKnown RBP12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 ITFG2Q969R8 447 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 VPS54Q9P1Q0 977 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 INTUQ9ULD6 942 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 SALL3Q9BXA9 1300 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 CCDC189A1A4V9 331 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 MSH2P43246 934 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 RPS6KA3P51812 740 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 ZBED6P86452 979 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 CATIPQ7Z7H3 387 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 TEX9Q8N6V9 391 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 RETREG2Q8NC44 543 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 ORAI2Q96SN7 254 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 RAB17Q9H0T7 212 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 RHBDL2Q9NX52 303 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 DEPDC5O75140 1603 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 KIF28PB7ZC32 967 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 IRF6O14896 467 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 SKOR1P84550 965 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 TRPM8Q7Z2W7 1104 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 KRT26Q7Z3Y9 468 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 MFN1Q8IWA4 741 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 KLHL23Q8NBE8 558 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 FBXO41Q8TF61 875 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 SMC6Q96SB8 1091 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 NAP1L3Q99457 506 aaPredicted RBP12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 SH3BP1Q9Y3L3 701 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 DIP2CQ9Y2E4 1556 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 MROH1Q8NDA8 1641 aa12.31□□□□□ -0.44
SYNPO2L-201ENST00000372873 DEXIO95424 95 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 BAG2O95816 211 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 ERVK-24P63145 666 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 PDE1CQ14123 709 aaPredicted RBP12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 ZNF449Q6P9G9 518 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 CMTR1Q8N1G2 835 aaKnown RBP12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 MB21D1Q8N884 522 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 HDAC7Q8WUI4 952 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 FERMT2Q96AC1 680 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 HAUS1Q96CS2 278 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 NAF1Q96HR8 494 aaKnown RBP12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 NUDCD1Q96RS6 583 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 SLC4A4Q9Y6R1 1079 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 ARHGEF40Q8TER5 1519 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 SEMA3EO15041 775 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 EIF4A3P38919 411 aaKnown RBP12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 EPSTI1Q96J88 318 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 GCP02774 474 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 METTL24Q5JXM2 366 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 BICDL1Q6ZP65 573 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 TOM1L2Q6ZVM7 507 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 PHLDB2Q86SQ0 1253 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 CABLES1Q8TDN4 633 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 CALML4Q96GE6 196 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 MROH7-TTC4A0A0A0MT08 1334 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 IGF2BP3O00425 579 aaKnown RBP eCLIP12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 SHOX2O60902 331 aaPredicted RBP12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 SASH1O94885 1247 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 KIF11P52732 1056 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 ADCY1Q08828 1119 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 KLHL30Q0D2K2 578 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 TRIM74Q86UV6 250 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 TRIM73Q86UV7 250 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 RAB3IL1Q8TBN0 382 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 DYDC2Q96IM9 177 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 FAXDC2Q96IV6 333 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 CEP63Q96MT8 703 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 AP1M1Q9BXS5 423 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 TXLNGQ9NUQ3 528 aa12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 BSDC1Q9NW68 430 aaPredicted RBP12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 DBNLQ9UJU6 430 aaKnown RBP12.3□□□□□ -0.44
SYNPO2L-201ENST00000372873 CTDNEP1O95476 244 aa12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 CHGBP05060 677 aa12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 CNGA1P29973 690 aa12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 CDC27P30260 824 aa12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 PSMC4P43686 418 aa12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 ELF3P78545 371 aaPredicted RBP12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 DEUP1Q05D60 604 aa12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 TBX2Q13207 712 aaPredicted RBP12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 TSGA10IPQ3SY00 556 aa12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 DTHD1Q6ZMT9 781 aa12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 MS4A14Q96JA4 679 aa12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 TMEM87BQ96K49 555 aa12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 RBM12Q9NTZ6 932 aaKnown RBP12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 hCG_1642624A0A1W2PR95 340 aa12.29□□□□□ -0.44
SYNPO2L-201ENST00000372873 FGAP02671 866 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms