RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 CSRNP1Q96S65 589 aa11.53□□□□□ -0.56
NUP188-201ENST00000372577 BPIFA3Q9BQP9 254 aa11.53□□□□□ -0.56
NUP188-201ENST00000372577 C1orf112Q9NSG2 853 aa11.53□□□□□ -0.56
NUP188-201ENST00000372577 PNMA6FA0A0J9YX94 578 aa11.53□□□□□ -0.56
NUP188-201ENST00000372577 FKBP3Q00688 224 aaKnown RBP11.53□□□□□ -0.56
NUP188-201ENST00000372577 PPP2R5AQ15172 486 aa11.53□□□□□ -0.56
NUP188-201ENST00000372577 LRCH2Q5VUJ6 765 aa11.53□□□□□ -0.56
NUP188-201ENST00000372577 PPP1R18Q6NYC8 613 aa11.53□□□□□ -0.56
NUP188-201ENST00000372577 EXOC8Q8IYI6 725 aa11.53□□□□□ -0.56
NUP188-201ENST00000372577 TRIM6Q9C030 488 aaPredicted RBP11.53□□□□□ -0.56
NUP188-201ENST00000372577 NRBP2Q9NSY0 501 aa11.53□□□□□ -0.56
NUP188-201ENST00000372577 KIAA1024Q9UPX6 916 aa11.53□□□□□ -0.56
NUP188-201ENST00000372577 LIG4P49917 911 aa11.52□□□□□ -0.56
NUP188-201ENST00000372577 BPIFB4P59827 614 aa11.52□□□□□ -0.56
NUP188-201ENST00000372577 FOXO4P98177 505 aa11.52□□□□□ -0.56
NUP188-201ENST00000372577 APBA1Q02410 837 aa11.52□□□□□ -0.56
NUP188-201ENST00000372577 FAM160B1Q5W0V3 765 aa11.52□□□□□ -0.56
NUP188-201ENST00000372577 ATP6V0A1Q93050 837 aa11.52□□□□□ -0.56
NUP188-201ENST00000372577 CDHR1Q96JP9 859 aa11.52□□□□□ -0.56
NUP188-201ENST00000372577 ASIC3Q9UHC3 531 aa11.52□□□□□ -0.56
NUP188-201ENST00000372577 PRPF6O94906 941 aaKnown RBP11.52□□□□□ -0.57
NUP188-201ENST00000372577 CCNE1P24864 410 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 ARHGAP44Q17R89 818 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 EXOC3L4Q17RC7 722 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 PPP1R13BQ96KQ4 1090 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 PNPLA7Q6ZV29 1317 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 LMNB1P20700 586 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 MNAT1P51948 309 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 AP3B2Q13367 1082 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 RABGGTAQ92696 567 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 NACC1Q96RE7 527 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 PIGSQ96S52 555 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 JPH2Q9BR39 696 aaPredicted RBP11.52□□□□□ -0.57
NUP188-201ENST00000372577 ZHX1Q9UKY1 873 aaPredicted RBP11.52□□□□□ -0.57
NUP188-201ENST00000372577 PREX1Q8TCU6 1659 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 CDK8P49336 464 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 MXRA7P84157 204 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 ALCAMQ13740 583 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 LONRF3Q496Y0 759 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 VSTM4Q8IW00 320 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 CCDC105Q8IYK2 499 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 CCDC170Q8IYT3 715 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 IPO4Q8TEX9 1081 aaKnown RBP11.52□□□□□ -0.57
NUP188-201ENST00000372577 DCAF4Q8WV16 495 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 TRPC6Q9Y210 931 aa11.52□□□□□ -0.57
NUP188-201ENST00000372577 ADAMTS13Q76LX8 1427 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 SMIM23A6NLE4 172 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 PTPREP23469 700 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 POLR2FP61218 127 aaKnown RBP11.51□□□□□ -0.57
NUP188-201ENST00000372577 NR5A1Q13285 461 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 CDC37Q16543 378 aaPredicted RBP11.51□□□□□ -0.57
NUP188-201ENST00000372577 LONRF2Q1L5Z9 754 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 CCDC93Q567U6 631 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 ARMCX5Q6P1M9 558 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 KLHL7Q8IXQ5 586 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 PANX2Q96RD6 677 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 MLXIPQ9HAP2 919 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 MKRN1Q9UHC7 482 aaKnown RBP11.51□□□□□ -0.57
NUP188-201ENST00000372577 CDC23Q9UJX2 597 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 E7EVH7 732 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 PDE6CP51160 858 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 MAP3K9P80192 1104 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 C10orf76Q5T2E6 689 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 LGSNQ5TDP6 509 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 SYDE2Q5VT97 1194 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 GLG1Q92896 1179 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 MASTLQ96GX5 879 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 TRIM7Q9C029 511 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 MINPP1Q9UNW1 487 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 CPDO75976 1380 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 USP17L8P0C7I0 530 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 CASP14P31944 242 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 PSMC2P35998 433 aaKnown RBP11.51□□□□□ -0.57
NUP188-201ENST00000372577 LRRC63Q05C16 580 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 CCDC6Q16204 474 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 SND1Q7KZF4 910 aaKnown RBP eCLIP11.51□□□□□ -0.57
NUP188-201ENST00000372577 ZNF512BQ96KM6 892 aaPredicted RBP11.51□□□□□ -0.57
NUP188-201ENST00000372577 DESI2Q9BSY9 194 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 TMEM206Q9H813 350 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 RNF14Q9UBS8 474 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 ADGRB1O14514 1584 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 FYB2Q5VWT5 728 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 POTEDQ86YR6 584 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 MYO3BQ8WXR4 1341 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 M0QZ92 97 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 ATP2C2O75185 946 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 PPFIA4O75335 1185 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 RTKN2Q8IZC4 609 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 CCDC97Q96F63 343 aaPredicted RBP11.51□□□□□ -0.57
NUP188-201ENST00000372577 PAGE5Q96GU1 130 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 TRERF1Q96PN7 1200 aa11.51□□□□□ -0.57
NUP188-201ENST00000372577 CPS1P31327 1500 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 USP17L3A6NCW0 530 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 USP17L4A6NCW7 530 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 GOLGA8KD6RF30 607 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 TNNC2P02585 160 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 STAT2P52630 851 aa11.5□□□□□ -0.57
NUP188-201ENST00000372577 PFKFB3Q16875 520 aaPredicted RBP11.5□□□□□ -0.57
NUP188-201ENST00000372577 USP17L1Q7RTZ2 530 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms