RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 GPATCH4Q5T3I0 446 aaKnown RBP7.99□□□□□ -1.13
USP1-202ENST00000371146 CXCL17Q6UXB2 119 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 BANK1Q8NDB2 785 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 STAMQ92783 540 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 TMEM87BQ96K49 555 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 TRIM47Q96LD4 638 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 BACH2Q9BYV9 841 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 OSBPL3Q9H4L5 887 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 FAM170AA1A519 330 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 BTBD18B2RXH4 712 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 VWA5AO00534 786 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 EN2P19622 333 aaPredicted RBP7.99□□□□□ -1.13
USP1-202ENST00000371146 ME1P48163 572 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 ADCY7P51828 1080 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 MDM2Q00987 491 aaPredicted RBP7.99□□□□□ -1.13
USP1-202ENST00000371146 ISM2Q6H9L7 571 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 NCAPH2Q6IBW4 605 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 NLRX1Q86UT6 975 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 TMX3Q96JJ7 454 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 PDGFCQ9NRA1 345 aa7.99□□□□□ -1.13
USP1-202ENST00000371146 RANBP2P49792 3224 aaKnown RBP7.99□□□□□ -1.13
USP1-202ENST00000371146 SCN9AQ15858 1988 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 ZBTB48P10074 688 aaPredicted RBP7.98□□□□□ -1.13
USP1-202ENST00000371146 RABEP1Q15276 862 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 FKBP1CQ5VVH2 108 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 SRBD1Q8N5C6 995 aaKnown RBP7.98□□□□□ -1.13
USP1-202ENST00000371146 STAG1Q8WVM7 1258 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 RBPJLQ9UBG7 517 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 FEM1BQ9UK73 627 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 PPP1R9AQ9ULJ8 1098 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 PITPNM2Q9BZ72 1349 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 PHF20L1A8MW92 1017 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 INHAP05111 366 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 CCL23P55773 120 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 FKBP1AP62942 108 aaKnown RBP7.98□□□□□ -1.13
USP1-202ENST00000371146 LACTBP83111 547 aaPredicted RBP7.98□□□□□ -1.13
USP1-202ENST00000371146 ZNF543Q08ER8 600 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 C8orf34Q49A92 452 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 SPOUT1Q5T280 376 aaKnown RBP7.98□□□□□ -1.13
USP1-202ENST00000371146 CYFIP1Q7L576 1253 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 OTOP1Q7RTM1 612 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 CTU1Q7Z7A3 348 aaKnown RBP7.98□□□□□ -1.13
USP1-202ENST00000371146 REXO1Q8N1G1 1221 aaKnown RBP7.98□□□□□ -1.13
USP1-202ENST00000371146 FAM212AQ96EL1 285 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 PAWRQ96IZ0 340 aaKnown RBP7.98□□□□□ -1.13
USP1-202ENST00000371146 TCHPQ9BT92 498 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 RARBP10826 455 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 HSPA4P34932 840 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 NECTIN1Q15223 517 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 CCDC178Q5BJE1 867 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 LDLRAD1Q5T700 205 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 KIAA1683Q9H0B3 1180 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 UNC93B1Q9H1C4 597 aa7.98□□□□□ -1.13
USP1-202ENST00000371146 ADD3Q9UEY8 706 aaKnown RBP7.98□□□□□ -1.13
USP1-202ENST00000371146 PDIA3P30101 505 aaKnown RBP7.97□□□□□ -1.13
USP1-202ENST00000371146 RGS2P41220 211 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 ANTXR2P58335 489 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 LY6KQ17RY6 165 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 CATSPERGQ6ZRH7 1159 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 TRIM50Q86XT4 487 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 TPH2Q8IWU9 490 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 DIS3L2Q8IYB7 885 aaKnown RBP7.97□□□□□ -1.13
USP1-202ENST00000371146 MTMR14Q8NCE2 650 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 LPAR1Q92633 364 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 ZBED2Q9BTP6 218 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 APOL6Q9BWW8 343 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 AZI2Q9H6S1 392 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 NYAP2Q9P242 653 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 TACC3Q9Y6A5 838 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 MEIS1O00470 390 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 ZNF500O60304 480 aaPredicted RBP7.97□□□□□ -1.13
USP1-202ENST00000371146 CSDE1O75534 798 aaKnown RBP7.97□□□□□ -1.13
USP1-202ENST00000371146 DSG3P32926 999 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 GCLCP48506 637 aaPredicted RBP7.97□□□□□ -1.13
USP1-202ENST00000371146 PPP2R5BQ15173 497 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 PLA2G4DQ86XP0 818 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 DGKHQ86XP1 1220 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.97□□□□□ -1.13
USP1-202ENST00000371146 TAF1LQ8IZX4 1826 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 KDM3BQ7LBC6 1761 aa7.97□□□□□ -1.13
USP1-202ENST00000371146 RASSF10A6NK89 507 aa7.96□□□□□ -1.13
USP1-202ENST00000371146 B4DLN1 442 aa7.96□□□□□ -1.13
USP1-202ENST00000371146 KBTBD13C9JR72 458 aa7.96□□□□□ -1.13
USP1-202ENST00000371146 SH2B2O14492 632 aaPredicted RBP7.96□□□□□ -1.13
USP1-202ENST00000371146 CD2BP2O95400 341 aaKnown RBP7.96□□□□□ -1.13
USP1-202ENST00000371146 SCRN1Q12765 414 aa7.96□□□□□ -1.13
USP1-202ENST00000371146 FAM160B2Q86V87 743 aa7.96□□□□□ -1.13
USP1-202ENST00000371146 LBHD1Q9BQE6 289 aaPredicted RBP7.96□□□□□ -1.13
USP1-202ENST00000371146 JMJD4Q9H9V9 463 aa7.96□□□□□ -1.13
USP1-202ENST00000371146 A1CFQ9NQ94 594 aaKnown RBP7.96□□□□□ -1.13
USP1-202ENST00000371146 WBP1LQ9NX94 342 aa7.96□□□□□ -1.13
USP1-202ENST00000371146 RABGAP1Q9Y3P9 1069 aa7.96□□□□□ -1.13
USP1-202ENST00000371146 CCDC88AQ3V6T2 1871 aa7.96□□□□□ -1.13
USP1-202ENST00000371146 GGPS1O95749 300 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 SBK1Q52WX2 424 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 ASPRV1Q53RT3 343 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 GIMAP6Q6P9H5 292 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 C7orf61Q8IZ16 206 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 OR6J1Q8NGC5 347 aa7.96□□□□□ -1.14
USP1-202ENST00000371146 CYP2W1Q8TAV3 490 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms