RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 BRD3Q15059 726 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 TTLL11Q8NHH1 800 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 TDRD7Q8NHU6 1098 aaKnown RBP21.56■■□□□ 1.04
LMO4-202ENST00000370544 GRAPLQ8TC17 118 aaPredicted RBP21.56■■□□□ 1.04
LMO4-202ENST00000370544 TUBGCP2Q9BSJ2 902 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 CCDC160A6NGH7 325 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 GCFC2P16383 781 aaKnown RBP21.56■■□□□ 1.04
LMO4-202ENST00000370544 MECOMQ03112 1051 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 HAUS2Q9NVX0 235 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 BSDC1Q9NW68 430 aaPredicted RBP21.56■■□□□ 1.04
LMO4-202ENST00000370544 ZSWIM5Q9P217 1185 aa21.56■■□□□ 1.04
LMO4-202ENST00000370544 HADHQ16836 314 aaKnown RBP21.55■■□□□ 1.04
LMO4-202ENST00000370544 ERCC6LQ2NKX8 1250 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 GDAP1L1Q96MZ0 367 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 MYL7Q01449 175 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 C10orf67Q8IYJ2 551 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 GRK7Q8WTQ7 553 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 POMGNT1Q8WZA1 660 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 DYNLL2Q96FJ2 89 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 DHX36Q9H2U1 1008 aaKnown RBP21.55■■□□□ 1.04
LMO4-202ENST00000370544 GUCY2FP51841 1108 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 TPD52P55327 224 aaPredicted RBP21.55■■□□□ 1.04
LMO4-202ENST00000370544 PPFIBP2Q8ND30 876 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 PRPF3O43395 683 aaKnown RBP21.55■■□□□ 1.04
LMO4-202ENST00000370544 SH3BP5O60239 455 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 H2AFZP0C0S5 128 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 IFNAR1P17181 557 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 CDC25BP30305 580 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 GTF2A1P52655 376 aaPredicted RBP21.55■■□□□ 1.04
LMO4-202ENST00000370544 PTPROQ16827 1216 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 H2AFVQ71UI9 128 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 AFAP1L2Q8N4X5 818 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 RNF169Q8NCN4 708 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 LINC00301Q8NCQ3 95 aa21.55■■□□□ 1.04
LMO4-202ENST00000370544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.55■■□□□ 1.04
LMO4-202ENST00000370544 DHTKD1Q96HY7 919 aaPredicted RBP21.55■■□□□ 1.04
LMO4-202ENST00000370544 PPARDQ03181 441 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 ZNF772Q68DY9 489 aaPredicted RBP21.54■■□□□ 1.04
LMO4-202ENST00000370544 RABEP2Q9H5N1 569 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 SEPT9Q9UHD8 586 aaPredicted RBP21.54■■□□□ 1.04
LMO4-202ENST00000370544 EPN1Q9Y6I3 576 aaPredicted RBP21.54■■□□□ 1.04
LMO4-202ENST00000370544 CASP14P31944 242 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 AOC3Q16853 763 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 SCYL2Q6P3W7 929 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 BMP3P12645 472 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 TMOD1P28289 359 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 NR5A1Q13285 461 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 SLC17A8Q8NDX2 589 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 BEGAINQ9BUH8 593 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 I3L4J1 428 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 TCP1P17987 556 aaKnown RBP21.54■■□□□ 1.04
LMO4-202ENST00000370544 PIK3CAP42336 1068 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 KCTD2Q14681 263 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 PPP2R5EQ16537 467 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 CYP2D7A0A087X1C5 515 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 GAP43P17677 238 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 ETF1P62495 437 aaKnown RBP21.54■■□□□ 1.04
LMO4-202ENST00000370544 IGBP1P78318 339 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 ATP11AP98196 1134 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 DIXDC1Q155Q3 683 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 SPOUT1Q5T280 376 aaKnown RBP21.54■■□□□ 1.04
LMO4-202ENST00000370544 ATP6V0A1Q93050 837 aa21.54■■□□□ 1.04
LMO4-202ENST00000370544 FTOQ9C0B1 505 aaKnown RBP eCLIP21.54■■□□□ 1.04
LMO4-202ENST00000370544 DPCR1Q3MIW9 517 aa21.53■■□□□ 1.04
LMO4-202ENST00000370544 CEP85LQ5SZL2 805 aa21.53■■□□□ 1.04
LMO4-202ENST00000370544 IQGAP3Q86VI3 1631 aa21.53■■□□□ 1.04
LMO4-202ENST00000370544 IFNB1P01574 187 aa21.53■■□□□ 1.04
LMO4-202ENST00000370544 CTNNA1P35221 906 aaKnown RBP21.53■■□□□ 1.04
LMO4-202ENST00000370544 P2RX5Q93086 422 aa21.53■■□□□ 1.04
LMO4-202ENST00000370544 EEF2KMTQ96G04 330 aa21.53■■□□□ 1.04
LMO4-202ENST00000370544 NR2F2P24468 414 aa21.53■■□□□ 1.04
LMO4-202ENST00000370544 EEF1GP26641 437 aaKnown RBP21.53■■□□□ 1.04
LMO4-202ENST00000370544 PALM3A6NDB9 673 aaPredicted RBP21.53■■□□□ 1.04
LMO4-202ENST00000370544 ZNF500O60304 480 aaPredicted RBP21.53■■□□□ 1.04
LMO4-202ENST00000370544 P3H4Q92791 437 aa21.53■■□□□ 1.04
LMO4-202ENST00000370544 COA7Q96BR5 231 aa21.53■■□□□ 1.04
LMO4-202ENST00000370544 LARGE1O95461 756 aa21.52■■□□□ 1.04
LMO4-202ENST00000370544 ZNF658Q5TYW1 1059 aaPredicted RBP21.52■■□□□ 1.04
LMO4-202ENST00000370544 BSPRYQ5W0U4 402 aa21.52■■□□□ 1.04
LMO4-202ENST00000370544 ANO3Q9BYT9 981 aa21.52■■□□□ 1.04
LMO4-202ENST00000370544 GIPC1O14908 333 aa21.52■■□□□ 1.04
LMO4-202ENST00000370544 IKBKBO14920 756 aa21.52■■□□□ 1.04
LMO4-202ENST00000370544 HNRNPDLO14979 420 aaKnown RBP21.52■■□□□ 1.04
LMO4-202ENST00000370544 TFDP1Q14186 410 aa21.52■■□□□ 1.04
LMO4-202ENST00000370544 SMYD4Q8IYR2 804 aaPredicted RBP21.52■■□□□ 1.04
LMO4-202ENST00000370544 ZMYND15Q9H091 742 aa21.52■■□□□ 1.04
LMO4-202ENST00000370544 RCOR1Q9UKL0 485 aa21.52■■□□□ 1.04
LMO4-202ENST00000370544 RXRBP28702 533 aa21.52■■□□□ 1.04
LMO4-202ENST00000370544 NECTIN1Q15223 517 aa21.52■■□□□ 1.04
LMO4-202ENST00000370544 SYDE2Q5VT97 1194 aa21.52■■□□□ 1.04
LMO4-202ENST00000370544 C11orf57Q6ZUT1 292 aaPredicted RBP21.52■■□□□ 1.04
LMO4-202ENST00000370544 BCL2L12Q9HB09 334 aa21.52■■□□□ 1.04
LMO4-202ENST00000370544 HESX1Q9UBX0 185 aa21.52■■□□□ 1.04
LMO4-202ENST00000370544 ADCY8P40145 1251 aa21.52■■□□□ 1.03
LMO4-202ENST00000370544 STAT2P52630 851 aa21.52■■□□□ 1.03
LMO4-202ENST00000370544 GKAP1Q5VSY0 366 aaPredicted RBP21.52■■□□□ 1.03
LMO4-202ENST00000370544 USP17L2Q6R6M4 530 aa21.52■■□□□ 1.03
LMO4-202ENST00000370544 BRINP3Q76B58 766 aa21.52■■□□□ 1.03
LMO4-202ENST00000370544 TRIM50Q86XT4 487 aa21.52■■□□□ 1.03
LMO4-202ENST00000370544 WDR11Q9BZH6 1224 aa21.52■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms