RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 TRIM32Q13049 653 aa11.07□□□□□ -0.64
GTF2B-201ENST00000370500 GPATCH4Q5T3I0 446 aaKnown RBP11.07□□□□□ -0.64
GTF2B-201ENST00000370500 ERICH6BQ5W0A0 696 aa11.07□□□□□ -0.64
GTF2B-201ENST00000370500 KIAA1211Q6ZU35 1233 aa11.07□□□□□ -0.64
GTF2B-201ENST00000370500 NPLOC4Q8TAT6 608 aa11.07□□□□□ -0.64
GTF2B-201ENST00000370500 MAP4K1Q92918 833 aa11.07□□□□□ -0.64
GTF2B-201ENST00000370500 ZSCAN10Q96SZ4 725 aaPredicted RBP11.07□□□□□ -0.64
GTF2B-201ENST00000370500 ZSWIM5Q9P217 1185 aa11.07□□□□□ -0.64
GTF2B-201ENST00000370500 ISY1Q9ULR0 285 aaKnown RBP11.07□□□□□ -0.64
GTF2B-201ENST00000370500 PLXNB2O15031 1838 aa11.07□□□□□ -0.64
GTF2B-201ENST00000370500 BRCA2P51587 3418 aa11.07□□□□□ -0.64
GTF2B-201ENST00000370500 ZNF236Q9UL36 1845 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 NEDD4P46934 1319 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 FARP2O94887 1054 aaPredicted RBP11.06□□□□□ -0.64
GTF2B-201ENST00000370500 ADH1BP00325 375 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 SNHG28P0DPA3 235 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 ZNF792Q3KQV3 632 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 KCTD1Q719H9 257 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 NECAB2Q7Z6G3 386 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 CPXCR1Q8N123 301 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 DDX11Q96FC9 970 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 MAML3Q96JK9 1138 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 UBAC1Q9BSL1 405 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 MAF1Q9H063 256 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 IL25Q9H293 177 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 RAVER2Q9HCJ3 691 aaKnown RBP11.06□□□□□ -0.64
GTF2B-201ENST00000370500 FLRT1Q9NZU1 646 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 PRR12Q9ULL5 1215 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 MYH4Q9Y623 1939 aa11.06□□□□□ -0.64
GTF2B-201ENST00000370500 DNAJC25-GNG10A0A024R161 153 aa11.05□□□□□ -0.64
GTF2B-201ENST00000370500 B4E1Z4 1266 aa11.05□□□□□ -0.64
GTF2B-201ENST00000370500 PDHBP11177 359 aa11.05□□□□□ -0.64
GTF2B-201ENST00000370500 ZNF543Q08ER8 600 aa11.05□□□□□ -0.64
GTF2B-201ENST00000370500 CCDC96Q2M329 555 aa11.05□□□□□ -0.64
GTF2B-201ENST00000370500 CASC1Q6TDU7 716 aa11.05□□□□□ -0.64
GTF2B-201ENST00000370500 EMID1Q96A84 441 aaPredicted RBP11.05□□□□□ -0.64
GTF2B-201ENST00000370500 TINF2Q9BSI4 451 aa11.05□□□□□ -0.64
GTF2B-201ENST00000370500 KAT14Q9H8E8 782 aa11.05□□□□□ -0.64
GTF2B-201ENST00000370500 DDX20Q9UHI6 824 aaKnown RBP11.05□□□□□ -0.64
GTF2B-201ENST00000370500 RIPK3Q9Y572 518 aa11.05□□□□□ -0.64
GTF2B-201ENST00000370500 PARP14Q460N5 1801 aa11.05□□□□□ -0.64
GTF2B-201ENST00000370500 SEPT4O43236 478 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 ICAM1P05362 532 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 CYP21A2P08686 494 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 CYBAP13498 195 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 CCND3P30281 292 aaPredicted RBP11.04□□□□□ -0.64
GTF2B-201ENST00000370500 CYP2C19P33261 490 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 PTH1RQ03431 593 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 SART3Q15020 963 aaKnown RBP11.04□□□□□ -0.64
GTF2B-201ENST00000370500 SYDE2Q5VT97 1194 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 MAMDC4Q6UXC1 1216 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 ANKRD35Q8N283 1001 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 ENAHQ8N8S7 591 aaPredicted RBP11.04□□□□□ -0.64
GTF2B-201ENST00000370500 ARRDC4Q8NCT1 418 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 PNMA1Q8ND90 353 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 NCOA7Q8NI08 942 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 MTA3Q9BTC8 594 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 RANBP17Q9H2T7 1088 aaKnown RBP11.04□□□□□ -0.64
GTF2B-201ENST00000370500 ACAD9Q9H845 621 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 PFASO15067 1338 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 ZNF536O15090 1300 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 SYNGAP1Q96PV0 1343 aa11.04□□□□□ -0.64
GTF2B-201ENST00000370500 TNRC18O15417 2968 aaPredicted RBP11.04□□□□□ -0.64
GTF2B-201ENST00000370500 ERICH2A1L162 156 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 PGK2P07205 417 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 CNGA1P29973 690 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 ASPRV1Q53RT3 343 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 IFIT1BQ5T764 474 aaKnown RBP11.03□□□□□ -0.64
GTF2B-201ENST00000370500 ZNF697Q5TEC3 545 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 RALYLQ86SE5 291 aaKnown RBP11.03□□□□□ -0.64
GTF2B-201ENST00000370500 PAWRQ96IZ0 340 aaKnown RBP11.03□□□□□ -0.64
GTF2B-201ENST00000370500 TRERF1Q96PN7 1200 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 ZKSCAN3Q9BRR0 538 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 ESYT1Q9BSJ8 1104 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 TSHZ2Q9NRE2 1034 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 CNPY2Q9Y2B0 182 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 NR2E3Q9Y5X4 410 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 TNKSO95271 1327 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 LOC102724159A0A0B4J2E5 919 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 E7EWF7 191 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 OATP04181 439 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 PWP2Q15269 919 aaKnown RBP11.03□□□□□ -0.64
GTF2B-201ENST00000370500 TTBK2Q6IQ55 1244 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 DPF3Q92784 378 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 AGBL1Q96MI9 1066 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 C11orf49Q9H6J7 331 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 GPCPD1Q9NPB8 672 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 RNF146Q9NTX7 359 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 CCPG1Q9ULG6 757 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 MTMR7Q9Y216 660 aa11.03□□□□□ -0.64
GTF2B-201ENST00000370500 RBM8AQ9Y5S9 174 aaKnown RBP11.03□□□□□ -0.64
GTF2B-201ENST00000370500 WDR19Q8NEZ3 1342 aa11.02□□□□□ -0.65
GTF2B-201ENST00000370500 LAMA4Q16363 1823 aa11.02□□□□□ -0.65
GTF2B-201ENST00000370500 PARP1P09874 1014 aaKnown RBP11.02□□□□□ -0.65
GTF2B-201ENST00000370500 ALAS1P13196 640 aa11.02□□□□□ -0.65
GTF2B-201ENST00000370500 SLC16A2P36021 539 aa11.02□□□□□ -0.65
GTF2B-201ENST00000370500 TRAF1Q13077 416 aa11.02□□□□□ -0.65
GTF2B-201ENST00000370500 SEC23AQ15436 765 aa11.02□□□□□ -0.65
GTF2B-201ENST00000370500 RNF20Q5VTR2 975 aa11.02□□□□□ -0.65
GTF2B-201ENST00000370500 CCDC174Q6PII3 467 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms