RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 ZSCAN10Q96SZ4 725 aaPredicted RBP18.9■□□□□ 0.62
VMA21-202ENST00000370361 LCTP09848 1927 aa18.9■□□□□ 0.62
VMA21-202ENST00000370361 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.89■□□□□ 0.61
VMA21-202ENST00000370361 RBM47A0AV96 593 aaKnown RBP18.89■□□□□ 0.61
VMA21-202ENST00000370361 NFIBO00712 420 aa18.89■□□□□ 0.61
VMA21-202ENST00000370361 SMPD1P17405 629 aa18.89■□□□□ 0.61
VMA21-202ENST00000370361 ITGB8P26012 769 aa18.89■□□□□ 0.61
VMA21-202ENST00000370361 CPT1AP50416 773 aa18.89■□□□□ 0.61
VMA21-202ENST00000370361 KIAA1211Q6ZU35 1233 aa18.89■□□□□ 0.61
VMA21-202ENST00000370361 FBXO16Q8IX29 292 aaPredicted RBP18.89■□□□□ 0.61
VMA21-202ENST00000370361 CLEC4DQ8WXI8 215 aa18.89■□□□□ 0.61
VMA21-202ENST00000370361 UBAC1Q9BSL1 405 aa18.89■□□□□ 0.61
VMA21-202ENST00000370361 POLR3EQ9NVU0 708 aa18.89■□□□□ 0.61
VMA21-202ENST00000370361 COL6A3P12111 3177 aa18.88■□□□□ 0.61
VMA21-202ENST00000370361 DYNC1LI2O43237 492 aaPredicted RBP18.88■□□□□ 0.61
VMA21-202ENST00000370361 PSRC1Q6PGN9 363 aaPredicted RBP18.88■□□□□ 0.61
VMA21-202ENST00000370361 ABCB11O95342 1321 aa18.88■□□□□ 0.61
VMA21-202ENST00000370361 KPNA6O60684 536 aa18.87■□□□□ 0.61
VMA21-202ENST00000370361 CD4P01730 458 aa18.87■□□□□ 0.61
VMA21-202ENST00000370361 EDNRBP24530 442 aa18.87■□□□□ 0.61
VMA21-202ENST00000370361 RPS6P62753 249 aaKnown RBP18.87■□□□□ 0.61
VMA21-202ENST00000370361 PDE4DQ08499 809 aa18.87■□□□□ 0.61
VMA21-202ENST00000370361 ITGA7Q13683 1181 aa18.87■□□□□ 0.61
VMA21-202ENST00000370361 TTC22Q5TAA0 569 aa18.87■□□□□ 0.61
VMA21-202ENST00000370361 CXCL17Q6UXB2 119 aa18.87■□□□□ 0.61
VMA21-202ENST00000370361 MCF2L2Q86YR7 1114 aa18.87■□□□□ 0.61
VMA21-202ENST00000370361 SCFD2Q8WU76 684 aa18.87■□□□□ 0.61
VMA21-202ENST00000370361 WDR11Q9BZH6 1224 aa18.87■□□□□ 0.61
VMA21-202ENST00000370361 MTIF3Q9H2K0 278 aaKnown RBP18.87■□□□□ 0.61
VMA21-202ENST00000370361 TNKSO95271 1327 aa18.86■□□□□ 0.61
VMA21-202ENST00000370361 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.86■□□□□ 0.61
VMA21-202ENST00000370361 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.86■□□□□ 0.61
VMA21-202ENST00000370361 B4E1Z4 1266 aa18.86■□□□□ 0.61
VMA21-202ENST00000370361 PARP1P09874 1014 aaKnown RBP18.86■□□□□ 0.61
VMA21-202ENST00000370361 CALML3P27482 149 aa18.86■□□□□ 0.61
VMA21-202ENST00000370361 BEX3Q00994 111 aa18.86■□□□□ 0.61
VMA21-202ENST00000370361 TRDNQ13061 729 aa18.86■□□□□ 0.61
VMA21-202ENST00000370361 TRAF1Q13077 416 aa18.86■□□□□ 0.61
VMA21-202ENST00000370361 PPP2R5BQ15173 497 aa18.86■□□□□ 0.61
VMA21-202ENST00000370361 EEPD1Q7L9B9 569 aa18.86■□□□□ 0.61
VMA21-202ENST00000370361 ENAHQ8N8S7 591 aaPredicted RBP18.86■□□□□ 0.61
VMA21-202ENST00000370361 ZKSCAN3Q9BRR0 538 aa18.86■□□□□ 0.61
VMA21-202ENST00000370361 PDGFCQ9NRA1 345 aa18.86■□□□□ 0.61
VMA21-202ENST00000370361 ZSWIM5Q9P217 1185 aa18.86■□□□□ 0.61
VMA21-202ENST00000370361 LAMA2P24043 3122 aaKnown RBP18.86■□□□□ 0.61
VMA21-202ENST00000370361 SUPT20HL2P0C7V6 817 aa18.85■□□□□ 0.61
VMA21-202ENST00000370361 CDC37Q16543 378 aaPredicted RBP18.85■□□□□ 0.61
VMA21-202ENST00000370361 IFIT1BQ5T764 474 aaKnown RBP18.85■□□□□ 0.61
VMA21-202ENST00000370361 SLC30A10Q6XR72 485 aa18.85■□□□□ 0.61
VMA21-202ENST00000370361 SAMD3Q8N6K7 520 aa18.85■□□□□ 0.61
VMA21-202ENST00000370361 GPHNQ9NQX3 736 aaPredicted RBP18.85■□□□□ 0.61
VMA21-202ENST00000370361 MAP3K20Q9NYL2 800 aaKnown RBP18.85■□□□□ 0.61
VMA21-202ENST00000370361 MRPL11Q9Y3B7 192 aaKnown RBP18.85■□□□□ 0.61
VMA21-202ENST00000370361 U3KPZ7 1027 aaPredicted RBP18.85■□□□□ 0.61
VMA21-202ENST00000370361 IRX5P78411 483 aaPredicted RBP18.84■□□□□ 0.61
VMA21-202ENST00000370361 TTLL4Q14679 1199 aa18.84■□□□□ 0.61
VMA21-202ENST00000370361 GUCD1Q96NT3 240 aa18.84■□□□□ 0.61
VMA21-202ENST00000370361 IWS1Q96ST2 819 aa18.84■□□□□ 0.61
VMA21-202ENST00000370361 SEMA6BQ9H3T3 888 aa18.84■□□□□ 0.61
VMA21-202ENST00000370361 HIPK3Q9H422 1215 aa18.84■□□□□ 0.61
VMA21-202ENST00000370361 EPHB4P54760 987 aa18.83■□□□□ 0.6
VMA21-202ENST00000370361 IRX6P78412 446 aaPredicted RBP18.83■□□□□ 0.6
VMA21-202ENST00000370361 ADGRF4Q8IZF3 695 aa18.83■□□□□ 0.6
VMA21-202ENST00000370361 NSUN6Q8TEA1 469 aaKnown RBP18.83■□□□□ 0.6
VMA21-202ENST00000370361 GOLGA8HP0CJ92 632 aa18.82■□□□□ 0.6
VMA21-202ENST00000370361 PURAQ00577 322 aaKnown RBP18.82■□□□□ 0.6
VMA21-202ENST00000370361 SART3Q15020 963 aaKnown RBP18.82■□□□□ 0.6
VMA21-202ENST00000370361 USH1GQ495M9 461 aa18.82■□□□□ 0.6
VMA21-202ENST00000370361 RASIP1Q5U651 963 aa18.82■□□□□ 0.6
VMA21-202ENST00000370361 FBXO11Q86XK2 927 aa18.82■□□□□ 0.6
VMA21-202ENST00000370361 OR6J1Q8NGC5 347 aa18.82■□□□□ 0.6
VMA21-202ENST00000370361 PURBQ96QR8 312 aaKnown RBP18.82■□□□□ 0.6
VMA21-202ENST00000370361 MTG1Q9BT17 334 aaPredicted RBP18.82■□□□□ 0.6
VMA21-202ENST00000370361 UBA5Q9GZZ9 404 aa18.82■□□□□ 0.6
VMA21-202ENST00000370361 IL23AQ9NPF7 189 aa18.82■□□□□ 0.6
VMA21-202ENST00000370361 ERICH2A1L162 156 aa18.81■□□□□ 0.6
VMA21-202ENST00000370361 DHX16O60231 1041 aaKnown RBP18.81■□□□□ 0.6
VMA21-202ENST00000370361 PFKMP08237 780 aa18.81■□□□□ 0.6
VMA21-202ENST00000370361 GSPT1P15170 499 aaKnown RBP18.81■□□□□ 0.6
VMA21-202ENST00000370361 CSF2RAP15509 400 aa18.81■□□□□ 0.6
VMA21-202ENST00000370361 PTPN11Q06124 597 aaPredicted RBP18.81■□□□□ 0.6
VMA21-202ENST00000370361 TMEM240Q5SV17 173 aa18.81■□□□□ 0.6
VMA21-202ENST00000370361 RPUSD2Q8IZ73 545 aaKnown RBP18.81■□□□□ 0.6
VMA21-202ENST00000370361 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.81■□□□□ 0.6
VMA21-202ENST00000370361 AMNQ9BXJ7 453 aa18.81■□□□□ 0.6
VMA21-202ENST00000370361 ALDH8A1Q9H2A2 487 aaPredicted RBP18.81■□□□□ 0.6
VMA21-202ENST00000370361 MYH6P13533 1939 aa18.8■□□□□ 0.6
VMA21-202ENST00000370361 GRIN2DO15399 1336 aa18.8■□□□□ 0.6
VMA21-202ENST00000370361 A6NJR5 290 aa18.8■□□□□ 0.6
VMA21-202ENST00000370361 PDE4AP27815 886 aa18.8■□□□□ 0.6
VMA21-202ENST00000370361 GHRHRQ02643 423 aa18.8■□□□□ 0.6
VMA21-202ENST00000370361 STXBP2Q15833 593 aa18.8■□□□□ 0.6
VMA21-202ENST00000370361 QRICH1Q2TAL8 776 aa18.8■□□□□ 0.6
VMA21-202ENST00000370361 NFRKBQ6P4R8 1299 aa18.8■□□□□ 0.6
VMA21-202ENST00000370361 RALYLQ86SE5 291 aaKnown RBP18.8■□□□□ 0.6
VMA21-202ENST00000370361 HERVK_113Q902F9 699 aa18.8■□□□□ 0.6
VMA21-202ENST00000370361 CDX2Q99626 313 aaPredicted RBP18.8■□□□□ 0.6
VMA21-202ENST00000370361 PPP1R12CQ9BZL4 782 aa18.8■□□□□ 0.6
VMA21-202ENST00000370361 SCN10AQ9Y5Y9 1956 aa18.79■□□□□ 0.6
VMA21-202ENST00000370361 B4GALT4O60513 344 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms