RNA–Protein interactions for RNA: ENST00000369653.8

UBL4A-201, Transcript of ubiquitin like 4A, humanhuman

TSL 3 BASIC

Gene UBL4A, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-201ENST00000369653 LRRC2Q9BYS8 371 aa16.6■□□□□ 0.25
UBL4A-201ENST00000369653 RANBP17Q9H2T7 1088 aaKnown RBP16.6■□□□□ 0.25
UBL4A-201ENST00000369653 SENP2Q9HC62 589 aa16.6■□□□□ 0.25
UBL4A-201ENST00000369653 SNAI1O95863 264 aaPredicted RBP16.59■□□□□ 0.25
UBL4A-201ENST00000369653 CALM1P0DP23 149 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 CALM2P0DP24 149 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 CALM3P0DP25 149 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 RAG1P15918 1043 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 SMAD3P84022 425 aaKnown RBP16.59■□□□□ 0.25
UBL4A-201ENST00000369653 FGD1P98174 961 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 EXOSC10Q01780 885 aaKnown RBP16.59■□□□□ 0.25
UBL4A-201ENST00000369653 TROAPQ12815 778 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 GRM4Q14833 912 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 CCDC174Q6PII3 467 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 ZNF654Q8IZM8 581 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 CTCFLQ8NI51 663 aaPredicted RBP16.59■□□□□ 0.25
UBL4A-201ENST00000369653 FGD4Q96M96 766 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 MAP3K14Q99558 947 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 GPHNQ9NQX3 736 aaPredicted RBP16.59■□□□□ 0.25
UBL4A-201ENST00000369653 FBXO40Q9UH90 709 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 PNMA2Q9UL42 364 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 SLC12A7Q9Y666 1083 aa16.59■□□□□ 0.25
UBL4A-201ENST00000369653 KIAA0355O15063 1070 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 DHX16O60231 1041 aaKnown RBP16.58■□□□□ 0.24
UBL4A-201ENST00000369653 ICAM1P05362 532 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 FOSL2P15408 326 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 CASTP20810 708 aaKnown RBP16.58■□□□□ 0.24
UBL4A-201ENST00000369653 PTGS1P23219 599 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 RPS6KB1P23443 525 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 KIF5BP33176 963 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 ACLYP53396 1101 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 FAAP100Q0VG06 881 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 TKFCQ3LXA3 575 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 C8orf34Q49A92 452 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 SYNE3Q6ZMZ3 975 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 SGMS1Q86VZ5 419 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 NUP133Q8WUM0 1156 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 TCEANC2Q96MN5 208 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 STARD7Q9NQZ5 370 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 TMEM39AQ9NV64 488 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 NRBP1Q9UHY1 535 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 MAD2L2Q9UI95 211 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 CNPY2Q9Y2B0 182 aa16.58■□□□□ 0.24
UBL4A-201ENST00000369653 DDX49Q9Y6V7 483 aaKnown RBP16.58■□□□□ 0.24
UBL4A-201ENST00000369653 SCN5AQ14524 2016 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 ZNF536O15090 1300 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 PALM3A6NDB9 673 aaPredicted RBP16.57■□□□□ 0.24
UBL4A-201ENST00000369653 KLRF2D3W0D1 207 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 ANAPC15P60006 121 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 SNAP25P60880 206 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 FPGSQ05932 587 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 KCNA10Q16322 511 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 ADGRF4Q8IZF3 695 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 USP38Q8NB14 1042 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 CHST13Q8NET6 341 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 DDX11Q96FC9 970 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 HOMER2Q9NSB8 354 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 CCPG1Q9ULG6 757 aa16.57■□□□□ 0.24
UBL4A-201ENST00000369653 DIS3Q9Y2L1 958 aaKnown RBP16.57■□□□□ 0.24
UBL4A-201ENST00000369653 DNAJC25-GNG10A0A024R161 153 aa16.56■□□□□ 0.24
UBL4A-201ENST00000369653 CPA1P15085 419 aa16.56■□□□□ 0.24
UBL4A-201ENST00000369653 CDC37Q16543 378 aaPredicted RBP16.56■□□□□ 0.24
UBL4A-201ENST00000369653 STAG2Q8N3U4 1231 aa16.56■□□□□ 0.24
UBL4A-201ENST00000369653 KLHDC9Q8NEP7 349 aa16.56■□□□□ 0.24
UBL4A-201ENST00000369653 AGBL1Q96MI9 1066 aa16.56■□□□□ 0.24
UBL4A-201ENST00000369653 MYL10Q9BUA6 226 aa16.56■□□□□ 0.24
UBL4A-201ENST00000369653 TM6SF1Q9BZW5 370 aa16.56■□□□□ 0.24
UBL4A-201ENST00000369653 CPVLQ9H3G5 476 aa16.56■□□□□ 0.24
UBL4A-201ENST00000369653 ACAD9Q9H845 621 aa16.56■□□□□ 0.24
UBL4A-201ENST00000369653 RNF146Q9NTX7 359 aa16.56■□□□□ 0.24
UBL4A-201ENST00000369653 CYP46A1Q9Y6A2 500 aa16.56■□□□□ 0.24
UBL4A-201ENST00000369653 SYNGAP1Q96PV0 1343 aa16.55■□□□□ 0.24
UBL4A-201ENST00000369653 GRXCR1A8MXD5 290 aa16.55■□□□□ 0.24
UBL4A-201ENST00000369653 C6orf222P0C671 652 aaPredicted RBP16.55■□□□□ 0.24
UBL4A-201ENST00000369653 ALAS1P13196 640 aa16.55■□□□□ 0.24
UBL4A-201ENST00000369653 DNAJB2P25686 324 aa16.55■□□□□ 0.24
UBL4A-201ENST00000369653 GNAQP50148 359 aa16.55■□□□□ 0.24
UBL4A-201ENST00000369653 GRIN2CQ14957 1233 aa16.55■□□□□ 0.24
UBL4A-201ENST00000369653 CCSAPQ6IQ19 270 aaPredicted RBP16.55■□□□□ 0.24
UBL4A-201ENST00000369653 APOA5Q6Q788 366 aa16.55■□□□□ 0.24
UBL4A-201ENST00000369653 RUFY3Q7L099 469 aa16.55■□□□□ 0.24
UBL4A-201ENST00000369653 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.55■□□□□ 0.24
UBL4A-201ENST00000369653 MICU3Q86XE3 530 aa16.55■□□□□ 0.24
UBL4A-201ENST00000369653 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.55■□□□□ 0.242e-9■■□□□ 14.1
UBL4A-201ENST00000369653 ZSWIM6Q9HCJ5 1215 aa16.55■□□□□ 0.24
UBL4A-201ENST00000369653 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.55■□□□□ 0.24
UBL4A-201ENST00000369653 FAM184BQ9ULE4 1060 aa16.55■□□□□ 0.24
UBL4A-201ENST00000369653 TCF20Q9UGU0 1960 aaKnown RBP16.55■□□□□ 0.24
UBL4A-201ENST00000369653 KLF18A0A0U1RQI7 1052 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 ZBTB43O43298 467 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 SEC24BO95487 1268 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 RCAN1P53805 252 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 CNTN2Q02246 1040 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 ACVR2BQ13705 512 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 CCDC144BQ3MJ40 725 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 Q6ZUG5 572 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 ANKRD33Q7Z3H0 272 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 ANKRD35Q8N283 1001 aa16.54■□□□□ 0.24
UBL4A-201ENST00000369653 FBXL16Q8N461 479 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms