RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 CCDC178Q5BJE1 867 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 CAGE1Q8TC20 777 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 ZNF483Q8TF39 744 aaPredicted RBP17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 VAT1LQ9HCJ6 419 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 SLIT2O94813 1529 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 MYH3P11055 1940 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 USP17L3A6NCW0 530 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 USP17L4A6NCW7 530 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 EIF3HO15372 352 aaKnown RBP eCLIP17.74■□□□□ 0.432e-12■□□□□ 9.7
SYNCRIP-202ENST00000369622 KLK7P49862 253 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 USP17L1Q7RTZ2 530 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 SH2D3CQ8N5H7 860 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 CCDC148Q8NFR7 591 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 CPSF2Q9P2I0 782 aaKnown RBP17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 MACROD2A1Z1Q3 448 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 MYBL1P10243 752 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 CYP27A1Q02318 531 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 DZIP1Q86YF9 867 aaKnown RBP17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 PNMA1Q8ND90 353 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 DISC1Q9NRI5 854 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 AGPAT5Q9NUQ2 364 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 NUP98P52948 1817 aa17.74■□□□□ 0.43
SYNCRIP-202ENST00000369622 CHD4Q14839 1912 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 BAZ2AQ9UIF9 1905 aaKnown RBP17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 PAPPAQ13219 1627 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 H7C1D1 291 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 AGPSO00116 658 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 IPO7O95373 1038 aaKnown RBP17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 CDR1P51861 262 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 IFT88Q13099 833 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 CSGALNACT2Q8N6G5 542 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 MB21D1Q8N884 522 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 TBC1D31Q96DN5 1066 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 SPDL1Q96EA4 605 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 ZNF652Q9Y2D9 606 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 ITIH6Q6UXX5 1313 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 KLHL33A6NCF5 533 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 LRRC10BA6NIK2 292 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 IRX1P78414 480 aaPredicted RBP17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 SF3A3Q12874 501 aaKnown RBP eCLIP17.73■□□□□ 0.432e-6■■■■□ 24.6
SYNCRIP-202ENST00000369622 CCDC40Q4G0X9 1142 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 TYW1BQ6NUM6 668 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 IRF2BP1Q8IU81 584 aa17.73■□□□□ 0.43
SYNCRIP-202ENST00000369622 MYH8P13535 1937 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 GRIN2DO15399 1336 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 PSMA7O14818 248 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 KCNQ2O43526 872 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 ATP1A1P05023 1023 aaKnown RBP17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 CALML3P27482 149 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 HIBADHP31937 336 aaKnown RBP17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 WHAMMP3Q1A5X7 153 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 HPS3Q969F9 1004 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 JADE2Q9NQC1 790 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 REXO2Q9Y3B8 237 aaKnown RBP17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 KIF3CO14782 793 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 LONP1P36776 959 aaKnown RBP17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 MTIF2P46199 727 aaKnown RBP17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 SF3B2Q13435 895 aaKnown RBP17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 LETM2Q2VYF4 491 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 SLC44A5Q8NCS7 719 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 DUSP10Q9Y6W6 482 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 MYH6P13533 1939 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 ZNF804BA4D1E1 1349 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 GOLGA6BA6NDN3 693 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 PSMD2Q13200 908 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 TRIM14Q14142 442 aa17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 BSDC1Q9NW68 430 aaPredicted RBP17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 ZNHIT6Q9NWK9 470 aaKnown RBP17.72■□□□□ 0.43
SYNCRIP-202ENST00000369622 COL1A1P02452 1464 aaPredicted RBP17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 A0A1B0GUA9 196 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 MEFVO15553 781 aaPredicted RBP17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 UPP2O95045 317 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 TRAPPC10P48553 1259 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 PPFIA1Q13136 1202 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 ADSSL1Q8N142 457 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 MMS19Q96T76 1030 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 PYM1Q9BRP8 204 aaKnown RBP17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 SLC40A1Q9NP59 571 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 SAP30BPQ9UHR5 308 aaKnown RBP17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 PCDHA4Q9UN74 947 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 ASIC1P78348 528 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 DDR1Q08345 913 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 PDE4DQ08499 809 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 TXNRD3Q86VQ6 643 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 COG1Q8WTW3 980 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 RRP36Q96EU6 259 aaKnown RBP17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 PSMB7Q99436 277 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 TUBGCP2Q9BSJ2 902 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 SAR1BQ9Y6B6 198 aa17.71■□□□□ 0.43
SYNCRIP-202ENST00000369622 OPLAHO14841 1288 aa17.7■□□□□ 0.42
SYNCRIP-202ENST00000369622 ZNF185O15231 689 aa17.7■□□□□ 0.42
SYNCRIP-202ENST00000369622 TSPY3P0CV98 308 aa17.7■□□□□ 0.42
SYNCRIP-202ENST00000369622 TSPY8P0CW00 308 aa17.7■□□□□ 0.42
SYNCRIP-202ENST00000369622 SEC24CP53992 1094 aa17.7■□□□□ 0.42
SYNCRIP-202ENST00000369622 CRYMQ14894 314 aa17.7■□□□□ 0.42
SYNCRIP-202ENST00000369622 NAALADL2Q58DX5 795 aa17.7■□□□□ 0.42
SYNCRIP-202ENST00000369622 RCSD1Q6JBY9 416 aa17.7■□□□□ 0.42
SYNCRIP-202ENST00000369622 A1CFQ9NQ94 594 aaKnown RBP17.7■□□□□ 0.42
SYNCRIP-202ENST00000369622 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.7■□□□□ 0.428e-9■■□□□ 13.3
SYNCRIP-202ENST00000369622 SHOX2O60902 331 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms