RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 TROAPQ12815 778 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 RAPGEF1Q13905 1077 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 ELF2Q15723 593 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 OTUD6AQ7L8S5 288 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 ELOA2Q8IYF1 753 aaPredicted RBP5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 PKD2L1Q9P0L9 805 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 FBXO2Q9UK22 296 aaPredicted RBP5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 GOLGA6L10A0A0M3HER8 536 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 PHACTR2O75167 634 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 FLOT1O75955 427 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 GH2P01242 217 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 GAP43P17677 238 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 PLCG1P19174 1290 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 RASA1P20936 1047 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 CCNE1P24864 410 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 ADKP55263 362 aaKnown RBP5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 ETF1P62495 437 aaKnown RBP5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 ARID5AQ03989 594 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 AOC3Q16853 763 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 SUPT20HL1Q3ZLR7 823 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 VSTM4Q8IW00 320 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 GRAMD1CQ8IYS0 662 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 ANO3Q9BYT9 981 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 THAP9Q9H5L6 903 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 TDRD3Q9H7E2 651 aaKnown RBP5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 ZSWIM4Q9H7M6 989 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 LARSQ9P2J5 1176 aaKnown RBP5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 KIAA1024Q9UPX6 916 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 SSR1P43307 286 aaKnown RBP5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 LMAN1P49257 510 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 ASIC2Q16515 512 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 LRCH2Q5VUJ6 765 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 NELFCDQ8IXH7 590 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 SPICE1Q8N0Z3 855 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 CACTINQ8WUQ7 758 aaKnown RBP5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 JAKMIP2Q96AA8 810 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 TCHPQ9BT92 498 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 SLC39A2Q9NP94 309 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 HOMER2Q9NSB8 354 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 ARMCX3Q9UH62 379 aaPredicted RBP5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 CLEC11AQ9Y240 323 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 KDM3BQ7LBC6 1761 aa5.89□□□□□ -1.47
SMNDC1-202ENST00000369603 H0YCG3 227 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 XRCC5P13010 732 aaKnown RBP5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 IL1R1P14778 569 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 AKR1B1P15121 316 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 KLRK1P26718 216 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 DNA2P51530 1060 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 FKBP3Q00688 224 aaKnown RBP5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 ARHGEF16Q5VV41 709 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 SLC17A8Q8NDX2 589 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 SLC16A10Q8TF71 515 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 TUBGCP2Q9BSJ2 902 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 SENP2Q9HC62 589 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 TBC1D7Q9P0N9 293 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 NYAP2Q9P242 653 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 NRBP1Q9UHY1 535 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 CNTNAP5Q8WYK1 1306 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 CCDC169A6NNP5 214 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 EXOC3O60645 756 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 EEF2P13639 858 aaKnown RBP5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 HOXA10P31260 410 aaPredicted RBP5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 IRX3P78415 501 aaPredicted RBP5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 SEC23AQ15436 765 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 SFMBT2Q5VUG0 894 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 C15orf52Q6ZUT6 534 aaKnown RBP5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 STAG2Q8N3U4 1231 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 ZFP91Q96JP5 570 aaPredicted RBP5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 FAM20AQ96MK3 541 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 HAUS4Q9H6D7 363 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 SERPINA10Q9UK55 444 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 FAM184BQ9ULE4 1060 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 PPP2R2CQ9Y2T4 447 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 PVALEFA0A1B0GWK0 134 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 VGLL3A8MV65 326 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 DDX39AO00148 427 aaKnown RBP5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 MAGEA1P43355 309 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 CACNB3P54284 484 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 LRRC63Q05C16 580 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 ZNF543Q08ER8 600 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 RAD51AP2Q09MP3 1159 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 STRN3Q13033 797 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 PABPC4Q13310 644 aaKnown RBP eCLIP5.88□□□□□ -1.475e-7■■□□□ 14.3
SMNDC1-202ENST00000369603 DPY19L2Q6NUT2 758 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 CDC42EP5Q6NZY7 148 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 FAM178BQ8IXR5 827 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 SECISBP2LQ93073 1101 aaKnown RBP5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 CNOT6LQ96LI5 555 aaKnown RBP5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 CCSER1Q9C0I3 900 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 TSKSQ9UJT2 592 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 AFDNP55196 1824 aaKnown RBP5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 ATRNO75882 1429 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 ESYT2A0FGR8 921 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 F5H6K3 240 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 H0YHG0 523 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 CDC25AP30304 524 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 USP11P51784 963 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 KLRC3Q07444 240 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 UBE2SQ16763 222 aa5.88□□□□□ -1.47
SMNDC1-202ENST00000369603 KMT5BQ4FZB7 885 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms