RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 FDPSP14324 419 aaKnown RBP10.16□□□□□ -0.78
SNX27-201ENST00000368838 PTPREP23469 700 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 GNAQP50148 359 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 METAP2P50579 478 aaKnown RBP eCLIP10.16□□□□□ -0.78
SNX27-201ENST00000368838 ATN1P54259 1190 aaPredicted RBP10.16□□□□□ -0.78
SNX27-201ENST00000368838 CCNA1P78396 465 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 PLS1Q14651 629 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 LRRC26Q2I0M4 334 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 IFIT1BQ5T764 474 aaKnown RBP10.16□□□□□ -0.78
SNX27-201ENST00000368838 TEX2Q8IWB9 1127 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 ZNF654Q8IZM8 581 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 TRPV1Q8NER1 839 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 DDX12PQ92771 950 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 MKL1Q969V6 931 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 LZTS2Q9BRK4 669 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 LRRC2Q9BYS8 371 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 MKNK2Q9HBH9 465 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 MORC2Q9Y6X9 1032 aaPredicted RBP10.16□□□□□ -0.78
SNX27-201ENST00000368838 IVNS1ABPQ9Y6Y0 642 aa10.16□□□□□ -0.78
SNX27-201ENST00000368838 PTPDC1A2A3K4 754 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 SLC15A5A6NIM6 579 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 TSPY2A6NKD2 308 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 RAD21O60216 631 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 RANBP6O60518 1105 aaKnown RBP10.15□□□□□ -0.78
SNX27-201ENST00000368838 KIF5BP33176 963 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 MAGEA10P43363 369 aaPredicted RBP10.15□□□□□ -0.78
SNX27-201ENST00000368838 MDM2Q00987 491 aaPredicted RBP10.15□□□□□ -0.78
SNX27-201ENST00000368838 TFAP4Q01664 338 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 FUT2Q10981 343 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 CHST3Q7LGC8 479 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 CATIPQ7Z7H3 387 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 SIAH1Q8IUQ4 282 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 FBXO18Q8NFZ0 1043 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 GTF3C2Q8WUA4 911 aaPredicted RBP10.15□□□□□ -0.78
SNX27-201ENST00000368838 GDF15Q99988 308 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 MOV10L1Q9BXT6 1211 aaKnown RBP10.15□□□□□ -0.78
SNX27-201ENST00000368838 SENP6Q9GZR1 1112 aaPredicted RBP10.15□□□□□ -0.78
SNX27-201ENST00000368838 IL17RBQ9NRM6 502 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 COL6A3P12111 3177 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 ELP1O95163 1332 aa10.15□□□□□ -0.78
SNX27-201ENST00000368838 PRPF3O43395 683 aaKnown RBP10.14□□□□□ -0.79
SNX27-201ENST00000368838 FLOT1O75955 427 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 DEXIO95424 95 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 TSPY3P0CV98 308 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 TSPY8P0CW00 308 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 SNHG28P0DPA3 235 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 TOP1P11387 765 aaKnown RBP10.14□□□□□ -0.79
SNX27-201ENST00000368838 COL6A1P12109 1028 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 ERCC3P19447 782 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 ADORA2AP29274 412 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 CDC27P30260 824 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 ICA1Q05084 483 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 PKP1Q13835 747 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 GRB14Q14449 540 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 COG2Q14746 738 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 RTN1Q16799 776 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 CSPP1Q1MSJ5 1256 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 PRAMEF19Q5SWL8 479 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 MFSD14CQ5VZR4 134 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 TMEM92Q6UXU6 159 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 TMEM179Q6ZVK1 233 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 NOL8Q76FK4 1167 aaKnown RBP10.14□□□□□ -0.79
SNX27-201ENST00000368838 Q7L0L9 218 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 DPP9Q86TI2 863 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 NCAPG2Q86XI2 1143 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 TRMT44Q8IYL2 757 aaKnown RBP10.14□□□□□ -0.79
SNX27-201ENST00000368838 FAM184AQ8NB25 1140 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 ATG4CQ96DT6 458 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 REPIN1Q9BWE0 567 aaKnown RBP10.14□□□□□ -0.79
SNX27-201ENST00000368838 INCENPQ9NQS7 918 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 FBXO28Q9NVF7 368 aa10.14□□□□□ -0.79
SNX27-201ENST00000368838 GOLGA8AA7E2F4 631 aa10.13□□□□□ -0.79
SNX27-201ENST00000368838 JAK2O60674 1132 aa10.13□□□□□ -0.79
SNX27-201ENST00000368838 COBLO75128 1261 aa10.13□□□□□ -0.79
SNX27-201ENST00000368838 RRP12Q5JTH9 1297 aaKnown RBP10.13□□□□□ -0.79
SNX27-201ENST00000368838 GJC2Q5T442 439 aaPredicted RBP10.13□□□□□ -0.79
SNX27-201ENST00000368838 LBX2Q6XYB7 198 aa10.13□□□□□ -0.79
SNX27-201ENST00000368838 NFXL1Q6ZNB6 911 aa10.13□□□□□ -0.79
SNX27-201ENST00000368838 TRIM22Q8IYM9 498 aa10.13□□□□□ -0.79
SNX27-201ENST00000368838 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.13□□□□□ -0.79
SNX27-201ENST00000368838 UBE2OQ9C0C9 1292 aaKnown RBP10.13□□□□□ -0.79
SNX27-201ENST00000368838 SPATC1LQ9H0A9 340 aa10.13□□□□□ -0.79
SNX27-201ENST00000368838 SENP2Q9HC62 589 aa10.13□□□□□ -0.79
SNX27-201ENST00000368838 TOMM22Q9NS69 142 aa10.13□□□□□ -0.79
SNX27-201ENST00000368838 MTMR4Q9NYA4 1195 aa10.13□□□□□ -0.79
SNX27-201ENST00000368838 NYAP2Q9P242 653 aa10.13□□□□□ -0.79
SNX27-201ENST00000368838 ORC3Q9UBD5 711 aaPredicted RBP10.13□□□□□ -0.79
SNX27-201ENST00000368838 DDX20Q9UHI6 824 aaKnown RBP10.13□□□□□ -0.79
SNX27-201ENST00000368838 PALM3A6NDB9 673 aaPredicted RBP10.12□□□□□ -0.79
SNX27-201ENST00000368838 hCG_1984214I3L0E3 225 aa10.12□□□□□ -0.79
SNX27-201ENST00000368838 EEF2P13639 858 aaKnown RBP10.12□□□□□ -0.79
SNX27-201ENST00000368838 CAPN2P17655 700 aa10.12□□□□□ -0.79
SNX27-201ENST00000368838 U2AF2P26368 475 aaKnown RBP eCLIP10.12□□□□□ -0.793e-9■■■■■ 28.8
SNX27-201ENST00000368838 ADD1P35611 737 aaKnown RBP10.12□□□□□ -0.79
SNX27-201ENST00000368838 CCT2P78371 535 aaKnown RBP10.12□□□□□ -0.79
SNX27-201ENST00000368838 IRX5P78411 483 aaPredicted RBP10.12□□□□□ -0.79
SNX27-201ENST00000368838 STK3Q13188 491 aa10.12□□□□□ -0.79
SNX27-201ENST00000368838 GRM4Q14833 912 aa10.12□□□□□ -0.79
SNX27-201ENST00000368838 TMTC3Q6ZXV5 915 aa10.12□□□□□ -0.79
SNX27-201ENST00000368838 BRAPQ7Z569 592 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms