RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 LINC00301Q8NCQ3 95 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 NAP1L4Q99733 375 aaKnown RBP14.05□□□□□ -0.16
TUBE1-202ENST00000368662 EHMT1Q9H9B1 1298 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 CLIC4Q9Y696 253 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 A0A0G2JMZ2 1700 aa14.05□□□□□ -0.16
TUBE1-202ENST00000368662 FAM205CA6NFA0 338 aa14.04□□□□□ -0.16
TUBE1-202ENST00000368662 PRPF40AO75400 957 aaKnown RBP14.04□□□□□ -0.16
TUBE1-202ENST00000368662 PLS1Q14651 629 aa14.04□□□□□ -0.16
TUBE1-202ENST00000368662 SLC39A14Q15043 492 aa14.04□□□□□ -0.16
TUBE1-202ENST00000368662 INF2Q27J81 1249 aa14.04□□□□□ -0.16
TUBE1-202ENST00000368662 CHST13Q8NET6 341 aa14.04□□□□□ -0.16
TUBE1-202ENST00000368662 TBCKQ8TEA7 893 aa14.04□□□□□ -0.16
TUBE1-202ENST00000368662 SMCR8Q8TEV9 937 aaPredicted RBP14.04□□□□□ -0.16
TUBE1-202ENST00000368662 CLEC4DQ8WXI8 215 aa14.04□□□□□ -0.16
TUBE1-202ENST00000368662 PARK7Q99497 189 aaKnown RBP14.04□□□□□ -0.16
TUBE1-202ENST00000368662 GDPD2Q9HCC8 539 aa14.04□□□□□ -0.16
TUBE1-202ENST00000368662 RNF146Q9NTX7 359 aa14.04□□□□□ -0.16
TUBE1-202ENST00000368662 TMEM260Q9NX78 707 aa14.04□□□□□ -0.16
TUBE1-202ENST00000368662 FBXO40Q9UH90 709 aa14.04□□□□□ -0.16
TUBE1-202ENST00000368662 MORC2Q9Y6X9 1032 aaPredicted RBP14.04□□□□□ -0.16
TUBE1-202ENST00000368662 SPTLC2O15270 562 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 HSD17B4P51659 736 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 SREBF2Q12772 1141 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 NOM1Q5C9Z4 860 aaKnown RBP14.03□□□□□ -0.16
TUBE1-202ENST00000368662 RIOX2Q8IUF8 465 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 ANO3Q9BYT9 981 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 FTOQ9C0B1 505 aaKnown RBP eCLIP14.03□□□□□ -0.16
TUBE1-202ENST00000368662 SPATC1LQ9H0A9 340 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 ACAD9Q9H845 621 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.03□□□□□ -0.16
TUBE1-202ENST00000368662 HOMER2Q9NSB8 354 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 LMBRD1Q9NUN5 540 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 GOLGA6L4A6NEF3 574 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 PPP6R2O75170 966 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 SLC25A27O95847 323 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 TAL1P17542 331 aaPredicted RBP14.03□□□□□ -0.16
TUBE1-202ENST00000368662 ATP2B1P20020 1258 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 GCLCP48506 637 aaPredicted RBP14.03□□□□□ -0.16
TUBE1-202ENST00000368662 PCDHB6Q9Y5E3 794 aa14.03□□□□□ -0.16
TUBE1-202ENST00000368662 COL11A1P12107 1806 aaPredicted RBP14.03□□□□□ -0.16
TUBE1-202ENST00000368662 NFIBO00712 420 aa14.02□□□□□ -0.16
TUBE1-202ENST00000368662 HOXA13P31271 388 aaPredicted RBP14.02□□□□□ -0.16
TUBE1-202ENST00000368662 USP11P51784 963 aa14.02□□□□□ -0.16
TUBE1-202ENST00000368662 UBE2HP62256 183 aa14.02□□□□□ -0.16
TUBE1-202ENST00000368662 PAGR1Q9BTK6 254 aa14.02□□□□□ -0.16
TUBE1-202ENST00000368662 CREBZFQ9NS37 354 aa14.02□□□□□ -0.16
TUBE1-202ENST00000368662 BTBD7Q9P203 1132 aa14.02□□□□□ -0.16
TUBE1-202ENST00000368662 FAM155AB1AL88 458 aaPredicted RBP14.02□□□□□ -0.17
TUBE1-202ENST00000368662 LAD1O00515 517 aa14.02□□□□□ -0.17
TUBE1-202ENST00000368662 GCFC2P16383 781 aaKnown RBP14.02□□□□□ -0.17
TUBE1-202ENST00000368662 APLP1P51693 650 aa14.02□□□□□ -0.17
TUBE1-202ENST00000368662 PTPAQ15257 358 aa14.02□□□□□ -0.17
TUBE1-202ENST00000368662 SKOR2Q2VWA4 1001 aaPredicted RBP14.02□□□□□ -0.17
TUBE1-202ENST00000368662 LETM2Q2VYF4 491 aa14.02□□□□□ -0.17
TUBE1-202ENST00000368662 MUM1L1Q5H9M0 696 aa14.02□□□□□ -0.17
TUBE1-202ENST00000368662 RNF207Q6ZRF8 634 aa14.02□□□□□ -0.17
TUBE1-202ENST00000368662 FAM43AQ8N2R8 423 aa14.02□□□□□ -0.17
TUBE1-202ENST00000368662 RBPJLQ9UBG7 517 aa14.02□□□□□ -0.17
TUBE1-202ENST00000368662 RIPK3Q9Y572 518 aa14.02□□□□□ -0.17
TUBE1-202ENST00000368662 SMCHD1A6NHR9 2005 aa14.01□□□□□ -0.17
TUBE1-202ENST00000368662 CCNT1O60563 726 aaKnown RBP14.01□□□□□ -0.17
TUBE1-202ENST00000368662 CYP2C8P10632 490 aa14.01□□□□□ -0.17
TUBE1-202ENST00000368662 SREBF1P36956 1147 aa14.01□□□□□ -0.17
TUBE1-202ENST00000368662 ME1P48163 572 aa14.01□□□□□ -0.17
TUBE1-202ENST00000368662 CCNA1P78396 465 aa14.01□□□□□ -0.17
TUBE1-202ENST00000368662 NBR1Q14596 966 aa14.01□□□□□ -0.17
TUBE1-202ENST00000368662 PPP4R3AQ6IN85 833 aa14.01□□□□□ -0.17
TUBE1-202ENST00000368662 POTEEQ6S8J3 1075 aa14.01□□□□□ -0.17
TUBE1-202ENST00000368662 MOXD1Q6UVY6 613 aa14.01□□□□□ -0.17
TUBE1-202ENST00000368662 PGBD1Q96JS3 809 aa14.01□□□□□ -0.17
TUBE1-202ENST00000368662 PTPN18Q99952 460 aa14.01□□□□□ -0.17
TUBE1-202ENST00000368662 CNMDO75829 334 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 MBD3O95983 291 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 ZNF174Q15697 407 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 NSMFQ6X4W1 530 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 FCHSD1Q86WN1 690 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 TBC1D5Q92609 795 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 PFASO15067 1338 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 RBBP6Q7Z6E9 1792 aaKnown RBP14□□□□□ -0.17
TUBE1-202ENST00000368662 MCM7P33993 719 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 RPS6P62753 249 aaKnown RBP14□□□□□ -0.17
TUBE1-202ENST00000368662 ERVK-9P63128 1117 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 ERVK-24P63145 666 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 ATP2C1P98194 919 aaPredicted RBP14□□□□□ -0.17
TUBE1-202ENST00000368662 ARL6IP4Q66PJ3 421 aaKnown RBP14□□□□□ -0.17
TUBE1-202ENST00000368662 ADALQ6DHV7 355 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 PAXIP1Q6ZW49 1069 aaPredicted RBP14□□□□□ -0.17
TUBE1-202ENST00000368662 SHCBP1Q8NEM2 672 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 GPRC5AQ8NFJ5 357 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 MOV10L1Q9BXT6 1211 aaKnown RBP14□□□□□ -0.17
TUBE1-202ENST00000368662 MROH8Q9H579 483 aa14□□□□□ -0.17
TUBE1-202ENST00000368662 RASSF10A6NK89 507 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 CYP3A4P08684 503 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 ARHGAP4P98171 946 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 NOGQ13253 232 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 PTGDRQ13258 359 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.99□□□□□ -0.17
TUBE1-202ENST00000368662 NCAPG2Q86XI2 1143 aa13.99□□□□□ -0.17
TUBE1-202ENST00000368662 REM2Q8IYK8 340 aaPredicted RBP13.99□□□□□ -0.17
TUBE1-202ENST00000368662 KRI1Q8N9T8 703 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms