RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 GNRH1P01148 92 aa16■□□□□ 0.15
TPM3-211ENST00000368531 FDPSP14324 419 aaKnown RBP16■□□□□ 0.15
TPM3-211ENST00000368531 RGS2P41220 211 aa16■□□□□ 0.15
TPM3-211ENST00000368531 RPS6P62753 249 aaKnown RBP16■□□□□ 0.15
TPM3-211ENST00000368531 MCF2L2Q86YR7 1114 aa16■□□□□ 0.15
TPM3-211ENST00000368531 ABRAQ8N0Z2 381 aa16■□□□□ 0.15
TPM3-211ENST00000368531 ALG1Q9BT22 464 aa16■□□□□ 0.15
TPM3-211ENST00000368531 GJB4Q9NTQ9 266 aa16■□□□□ 0.15
TPM3-211ENST00000368531 CYP39A1Q9NYL5 469 aa16■□□□□ 0.15
TPM3-211ENST00000368531 PFASO15067 1338 aa15.99■□□□□ 0.15
TPM3-211ENST00000368531 ZNF236Q9UL36 1845 aa15.99■□□□□ 0.15
TPM3-211ENST00000368531 SMCO2A6NFE2 343 aa15.99■□□□□ 0.15
TPM3-211ENST00000368531 GCOM1H8Y6P7 765 aaPredicted RBP15.99■□□□□ 0.15
TPM3-211ENST00000368531 POLR2MP0CAP2 368 aa15.99■□□□□ 0.15
TPM3-211ENST00000368531 NLRP5P59047 1200 aa15.99■□□□□ 0.15
TPM3-211ENST00000368531 UBE2SQ16763 222 aa15.99■□□□□ 0.15
TPM3-211ENST00000368531 USP17L6PQ6QN14 398 aa15.99■□□□□ 0.15
TPM3-211ENST00000368531 FCHSD1Q86WN1 690 aa15.99■□□□□ 0.15
TPM3-211ENST00000368531 USP6NLQ92738 828 aa15.99■□□□□ 0.15
TPM3-211ENST00000368531 CUL5Q93034 780 aa15.99■□□□□ 0.15
TPM3-211ENST00000368531 PSTPIP2Q9H939 334 aa15.99■□□□□ 0.15
TPM3-211ENST00000368531 PTPN22Q9Y2R2 807 aa15.99■□□□□ 0.15
TPM3-211ENST00000368531 PTCH2Q9Y6C5 1203 aa15.99■□□□□ 0.15
TPM3-211ENST00000368531 DNAJC25-GNG10A0A024R161 153 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 hCG_1984214I3L0E3 225 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 KCNA4P22459 653 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 ADCY7P51828 1080 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 CCL14Q16627 93 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.98■□□□□ 0.15
TPM3-211ENST00000368531 ZNF713Q8N859 430 aaPredicted RBP15.98■□□□□ 0.15
TPM3-211ENST00000368531 FAM184AQ8NB25 1140 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 SPRYD3Q8NCJ5 442 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 SMARCC2Q8TAQ2 1214 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 WASF1Q92558 559 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 SHISA4Q96DD7 197 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 TAAR1Q96RJ0 339 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 APBA2Q99767 749 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 SLC5A4Q9NY91 659 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 COL20A1Q9P218 1284 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 KCNJ14Q9UNX9 436 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 SMC3Q9UQE7 1217 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 MCM3APO60318 1980 aa15.98■□□□□ 0.15
TPM3-211ENST00000368531 PCNTO95613 3336 aa15.97■□□□□ 0.15
TPM3-211ENST00000368531 SOWAHBA6NEL2 793 aa15.97■□□□□ 0.15
TPM3-211ENST00000368531 ADAMTS3O15072 1205 aa15.97■□□□□ 0.15
TPM3-211ENST00000368531 ADCY3O60266 1144 aa15.97■□□□□ 0.15
TPM3-211ENST00000368531 ELNP15502 786 aa15.97■□□□□ 0.15
TPM3-211ENST00000368531 PRMT2P55345 433 aa15.97■□□□□ 0.15
TPM3-211ENST00000368531 HMGN5P82970 282 aaKnown RBP15.97■□□□□ 0.15
TPM3-211ENST00000368531 GUCY1B3Q02153 619 aa15.97■□□□□ 0.15
TPM3-211ENST00000368531 CUL4AQ13619 759 aa15.97■□□□□ 0.15
TPM3-211ENST00000368531 ZNF792Q3KQV3 632 aa15.97■□□□□ 0.15
TPM3-211ENST00000368531 PPP1R18Q6NYC8 613 aa15.97■□□□□ 0.15
TPM3-211ENST00000368531 FAM133AQ8N9E0 248 aa15.97■□□□□ 0.15
TPM3-211ENST00000368531 RGS22Q8NE09 1264 aa15.97■□□□□ 0.15
TPM3-211ENST00000368531 SYTL5Q8TDW5 730 aaPredicted RBP15.97■□□□□ 0.15
TPM3-211ENST00000368531 CCDC12Q8WUD4 166 aaPredicted RBP15.97■□□□□ 0.15
TPM3-211ENST00000368531 C6orf50Q9HD87 102 aa15.97■□□□□ 0.15
TPM3-211ENST00000368531 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.97■□□□□ 0.15
TPM3-211ENST00000368531 DDX49Q9Y6V7 483 aaKnown RBP15.97■□□□□ 0.15
TPM3-211ENST00000368531 HSP90AA1P07900 732 aaKnown RBP15.96■□□□□ 0.15
TPM3-211ENST00000368531 XBP1P17861 261 aa15.96■□□□□ 0.15
TPM3-211ENST00000368531 GJB2P29033 226 aa15.96■□□□□ 0.15
TPM3-211ENST00000368531 HSD17B4P51659 736 aa15.96■□□□□ 0.15
TPM3-211ENST00000368531 MRPL12P52815 198 aaKnown RBP15.96■□□□□ 0.15
TPM3-211ENST00000368531 CCDC148Q8NFR7 591 aa15.96■□□□□ 0.15
TPM3-211ENST00000368531 MAML3Q96JK9 1138 aa15.96■□□□□ 0.15
TPM3-211ENST00000368531 RIC8AQ9NPQ8 531 aa15.96■□□□□ 0.15
TPM3-211ENST00000368531 SH3GLB2Q9NR46 395 aa15.96■□□□□ 0.15
TPM3-211ENST00000368531 TMEM260Q9NX78 707 aa15.96■□□□□ 0.15
TPM3-211ENST00000368531 FLRT1Q9NZU1 646 aa15.96■□□□□ 0.15
TPM3-211ENST00000368531 BIN2Q9UBW5 565 aaPredicted RBP15.96■□□□□ 0.15
TPM3-211ENST00000368531 MEIS2O14770 477 aa15.95■□□□□ 0.14
TPM3-211ENST00000368531 HOXC6P09630 235 aa15.95■□□□□ 0.14
TPM3-211ENST00000368531 UBXN2AP68543 259 aa15.95■□□□□ 0.14
TPM3-211ENST00000368531 IRF5Q13568 498 aa15.95■□□□□ 0.14
TPM3-211ENST00000368531 TRIM29Q14134 588 aa15.95■□□□□ 0.14
TPM3-211ENST00000368531 JAKMIP3Q5VZ66 844 aa15.95■□□□□ 0.14
TPM3-211ENST00000368531 RASGRP4Q8TDF6 673 aa15.95■□□□□ 0.14
TPM3-211ENST00000368531 SH3TC2Q8TF17 1288 aa15.95■□□□□ 0.14
TPM3-211ENST00000368531 TRIB2Q92519 343 aa15.95■□□□□ 0.14
TPM3-211ENST00000368531 PGBD1Q96JS3 809 aa15.95■□□□□ 0.14
TPM3-211ENST00000368531 FGD4Q96M96 766 aa15.95■□□□□ 0.14
TPM3-211ENST00000368531 ZMYND12Q9H0C1 365 aa15.95■□□□□ 0.14
TPM3-211ENST00000368531 ASTN1O14525 1302 aa15.94■□□□□ 0.14
TPM3-211ENST00000368531 ESYT2A0FGR8 921 aa15.94■□□□□ 0.14
TPM3-211ENST00000368531 MYCP01106 439 aaPredicted RBP15.94■□□□□ 0.14
TPM3-211ENST00000368531 XRCC5P13010 732 aaKnown RBP15.94■□□□□ 0.14
TPM3-211ENST00000368531 EIF2AK2P19525 551 aaKnown RBP15.94■□□□□ 0.14
TPM3-211ENST00000368531 GNA11P29992 359 aa15.94■□□□□ 0.14
TPM3-211ENST00000368531 GRK4P32298 578 aa15.94■□□□□ 0.14
TPM3-211ENST00000368531 CYP2C19P33261 490 aa15.94■□□□□ 0.14
TPM3-211ENST00000368531 ALDH5A1P51649 535 aaPredicted RBP15.94■□□□□ 0.14
TPM3-211ENST00000368531 TRIM32Q13049 653 aa15.94■□□□□ 0.14
TPM3-211ENST00000368531 ARHGEF16Q5VV41 709 aa15.94■□□□□ 0.14
TPM3-211ENST00000368531 FBXO46Q6PJ61 603 aaPredicted RBP15.94■□□□□ 0.14
TPM3-211ENST00000368531 SAMD3Q8N6K7 520 aa15.94■□□□□ 0.14
TPM3-211ENST00000368531 C8orf76Q96K31 380 aa15.94■□□□□ 0.14
TPM3-211ENST00000368531 RMDN3Q96TC7 470 aa15.94■□□□□ 0.14
TPM3-211ENST00000368531 MAP3K20Q9NYL2 800 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms