RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 TEX2Q8IWB9 1127 aa15.77■□□□□ 0.11
USF1-202ENST00000368020 CUL5Q93034 780 aa15.77■□□□□ 0.11
USF1-202ENST00000368020 CCDC51Q96ER9 411 aa15.77■□□□□ 0.11
USF1-202ENST00000368020 PPP1R13BQ96KQ4 1090 aa15.77■□□□□ 0.11
USF1-202ENST00000368020 PANX2Q96RD6 677 aa15.77■□□□□ 0.11
USF1-202ENST00000368020 LRRC27Q9C0I9 530 aa15.77■□□□□ 0.11
USF1-202ENST00000368020 STK17AQ9UEE5 414 aa15.77■□□□□ 0.11
USF1-202ENST00000368020 CTNND2Q9UQB3 1225 aa15.77■□□□□ 0.11
USF1-202ENST00000368020 FRMPD2Q68DX3 1309 aaPredicted RBP15.76■□□□□ 0.11
USF1-202ENST00000368020 GLTPD2A6NH11 291 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 LRRC10BA6NIK2 292 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 PSMA7O14818 248 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 SLC26A4O43511 780 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 DDNO94850 711 aaPredicted RBP15.76■□□□□ 0.11
USF1-202ENST00000368020 RHOBTB3O94955 611 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 FXR2P51116 673 aaKnown RBP eCLIP15.76■□□□□ 0.11
USF1-202ENST00000368020 CCDC96Q2M329 555 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 PPP4R3AQ6IN85 833 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 PPFIBP1Q86W92 1011 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 IGSF22Q8N9C0 903 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 MTMR8Q96EF0 704 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 MED15Q96RN5 788 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 MTRQ99707 1265 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 BAG1Q99933 345 aaPredicted RBP15.76■□□□□ 0.11
USF1-202ENST00000368020 UBA5Q9GZZ9 404 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 BLZF1Q9H2G9 400 aa15.76■□□□□ 0.11
USF1-202ENST00000368020 ADD3Q9UEY8 706 aaKnown RBP15.76■□□□□ 0.11
USF1-202ENST00000368020 LIMA1Q9UHB6 759 aaKnown RBP15.76■□□□□ 0.11
USF1-202ENST00000368020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.76■□□□□ 0.118e-7■■■□□ 17.7
USF1-202ENST00000368020 USP27XA6NNY8 438 aa15.75■□□□□ 0.11
USF1-202ENST00000368020 TMEM232C9JQI7 657 aa15.75■□□□□ 0.11
USF1-202ENST00000368020 WNT10BO00744 389 aa15.75■□□□□ 0.11
USF1-202ENST00000368020 ENTPD3O75355 529 aa15.75■□□□□ 0.11
USF1-202ENST00000368020 PDIA5Q14554 519 aa15.75■□□□□ 0.11
USF1-202ENST00000368020 CALCRLQ16602 461 aa15.75■□□□□ 0.11
USF1-202ENST00000368020 NAALADL2Q58DX5 795 aa15.75■□□□□ 0.11
USF1-202ENST00000368020 TMEM179Q6ZVK1 233 aa15.75■□□□□ 0.11
USF1-202ENST00000368020 ADGRF4Q8IZF3 695 aa15.75■□□□□ 0.11
USF1-202ENST00000368020 NELFBQ8WX92 580 aa15.75■□□□□ 0.11
USF1-202ENST00000368020 JMJD4Q9H9V9 463 aa15.75■□□□□ 0.11
USF1-202ENST00000368020 TRMT1Q9NXH9 659 aaKnown RBP15.75■□□□□ 0.11
USF1-202ENST00000368020 PCDHAC2Q9Y5I4 1007 aa15.75■□□□□ 0.11
USF1-202ENST00000368020 ATRNL1Q5VV63 1379 aa15.75■□□□□ 0.11
USF1-202ENST00000368020 BICDL2A1A5D9 508 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 AKR1B15C9JRZ8 316 aaPredicted RBP15.74■□□□□ 0.11
USF1-202ENST00000368020 SPDYE2Q495Y8 402 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 CERKLQ49MI3 558 aaPredicted RBP15.74■□□□□ 0.11
USF1-202ENST00000368020 COBLL1Q53SF7 1204 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 CNGA4Q8IV77 575 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 DHTKD1Q96HY7 919 aaPredicted RBP15.74■□□□□ 0.11
USF1-202ENST00000368020 CPVLQ9H3G5 476 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 TDRD3Q9H7E2 651 aaKnown RBP15.74■□□□□ 0.11
USF1-202ENST00000368020 GPCPD1Q9NPB8 672 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 TMOD2Q9NZR1 351 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 BIN2Q9UBW5 565 aaPredicted RBP15.74■□□□□ 0.11
USF1-202ENST00000368020 CASP1P29466 404 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 JAKMIP3Q5VZ66 844 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 TATDN1Q6P1N9 297 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 RASGRP2Q7LDG7 609 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 APTXQ7Z2E3 356 aaKnown RBP15.74■□□□□ 0.11
USF1-202ENST00000368020 ADSSL1Q8N142 457 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 GIMAP8Q8ND71 665 aaPredicted RBP15.74■□□□□ 0.11
USF1-202ENST00000368020 MTMR9Q96QG7 549 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 C7orf25Q9BPX7 421 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 THAP9Q9H5L6 903 aa15.74■□□□□ 0.11
USF1-202ENST00000368020 ZNF70Q9UC06 446 aaPredicted RBP15.74■□□□□ 0.11
USF1-202ENST00000368020 PHLPP2Q6ZVD8 1323 aa15.73■□□□□ 0.11
USF1-202ENST00000368020 SHTN1A0MZ66 631 aa15.73■□□□□ 0.11
USF1-202ENST00000368020 PLCG1P19174 1290 aa15.73■□□□□ 0.11
USF1-202ENST00000368020 EEF1GP26641 437 aaKnown RBP15.73■□□□□ 0.11
USF1-202ENST00000368020 PBX1P40424 430 aa15.73■□□□□ 0.11
USF1-202ENST00000368020 CLK2P49760 499 aaKnown RBP15.73■□□□□ 0.11
USF1-202ENST00000368020 STX17P56962 302 aa15.73■□□□□ 0.11
USF1-202ENST00000368020 NFIAQ12857 509 aa15.73■□□□□ 0.11
USF1-202ENST00000368020 TRAF1Q13077 416 aa15.73■□□□□ 0.11
USF1-202ENST00000368020 KIF4BQ2VIQ3 1234 aa15.73■□□□□ 0.11
USF1-202ENST00000368020 TC2NQ8N9U0 490 aa15.73■□□□□ 0.11
USF1-202ENST00000368020 ZNF592Q92610 1267 aa15.73■□□□□ 0.11
USF1-202ENST00000368020 STAMQ92783 540 aa15.73■□□□□ 0.11
USF1-202ENST00000368020 CDK5RAP3Q96JB5 506 aa15.73■□□□□ 0.11
USF1-202ENST00000368020 EXOC1Q9NV70 894 aa15.73■□□□□ 0.11
USF1-202ENST00000368020 MYH7BA7E2Y1 1941 aa15.72■□□□□ 0.11
USF1-202ENST00000368020 PRCPP42785 496 aa15.72■□□□□ 0.11
USF1-202ENST00000368020 SLC1A4P43007 532 aa15.72■□□□□ 0.11
USF1-202ENST00000368020 KMT5BQ4FZB7 885 aa15.72■□□□□ 0.11
USF1-202ENST00000368020 HSP90AA4PQ58FG1 418 aa15.72■□□□□ 0.11
USF1-202ENST00000368020 TCP11X2Q5H9J9 407 aa15.72■□□□□ 0.11
USF1-202ENST00000368020 CNNM4Q6P4Q7 775 aa15.72■□□□□ 0.11
USF1-202ENST00000368020 SAMD7Q7Z3H4 446 aa15.72■□□□□ 0.11
USF1-202ENST00000368020 FAM83AQ86UY5 434 aa15.72■□□□□ 0.11
USF1-202ENST00000368020 TMEM139Q8IV31 216 aa15.72■□□□□ 0.11
USF1-202ENST00000368020 FAM114A1Q8IWE2 563 aa15.72■□□□□ 0.11
USF1-202ENST00000368020 ZSCAN29Q8IWY8 852 aaPredicted RBP15.72■□□□□ 0.11
USF1-202ENST00000368020 SMYD4Q8IYR2 804 aaPredicted RBP15.72■□□□□ 0.11
USF1-202ENST00000368020 GMCL1P1Q8NEA9 526 aa15.72■□□□□ 0.11
USF1-202ENST00000368020 ADARB2Q9NS39 739 aaKnown RBP15.72■□□□□ 0.11
USF1-202ENST00000368020 N4BP3O15049 544 aa15.71■□□□□ 0.11
USF1-202ENST00000368020 CDC25AP30304 524 aa15.71■□□□□ 0.11
USF1-202ENST00000368020 EPS15P42566 896 aa15.71■□□□□ 0.11
USF1-202ENST00000368020 ETF1P62495 437 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms