RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 GPATCH4Q5T3I0 446 aaKnown RBP12.59□□□□□ -0.39
RD3-201ENST00000367002 TOGARAM2Q6ZUX3 1019 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 PPM1KQ8N3J5 372 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 FAM169AQ9Y6X4 670 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 GLI2P10070 1586 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 HECW2Q9P2P5 1572 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 USP17L3A6NCW0 530 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 USP17L4A6NCW7 530 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 USP17L1Q7RTZ2 530 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 LARGE2Q8N3Y3 721 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 PPFIBP2Q8ND30 876 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 OXER1Q8TDS5 423 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 IWS1Q96ST2 819 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 NHEJ1Q9H9Q4 299 aaPredicted RBP12.59□□□□□ -0.39
RD3-201ENST00000367002 PLCB1Q9NQ66 1216 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 HOMER3Q9NSC5 361 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 PARP2Q9UGN5 583 aa12.59□□□□□ -0.39
RD3-201ENST00000367002 ZCCHC11Q5TAX3 1644 aaKnown RBP12.59□□□□□ -0.39
RD3-201ENST00000367002 RPAP1Q9BWH6 1393 aaPredicted RBP12.58□□□□□ -0.4
RD3-201ENST00000367002 IRX3P78415 501 aaPredicted RBP12.58□□□□□ -0.4
RD3-201ENST00000367002 ATP11AP98196 1134 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 GKAP1Q5VSY0 366 aaPredicted RBP12.58□□□□□ -0.4
RD3-201ENST00000367002 MCTP2Q6DN12 878 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 MIER3Q7Z3K6 550 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 DISC1Q9NRI5 854 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 STK17AQ9UEE5 414 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 LEMD3Q9Y2U8 911 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 CHD1O14646 1710 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 ATP10DQ9P241 1426 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 NEDD4P46934 1319 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 IQCB1Q15051 598 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 HHATQ5VTY9 493 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 ZNF579Q8NAF0 562 aaKnown RBP12.58□□□□□ -0.4
RD3-201ENST00000367002 STAG1Q8WVM7 1258 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 NDST4Q9H3R1 872 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 CRB1P82279 1406 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 H0YIN7 160 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 EPHB4P54760 987 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 EXOSC10Q01780 885 aaKnown RBP12.58□□□□□ -0.4
RD3-201ENST00000367002 MECOMQ03112 1051 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 CUL4BQ13620 913 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 DLGAP5Q15398 846 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 ODR4Q5SWX8 454 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 SHC4Q6S5L8 630 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 TMTC3Q6ZXV5 915 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 PSMD1Q99460 953 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 BPIFA3Q9BQP9 254 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 AMNQ9BXJ7 453 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 KCNF1Q9H3M0 494 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 THRAP3Q9Y2W1 955 aaKnown RBP12.58□□□□□ -0.4
RD3-201ENST00000367002 BZW2Q9Y6E2 419 aaKnown RBP12.58□□□□□ -0.4
RD3-201ENST00000367002 TAF6LQ9Y6J9 622 aa12.58□□□□□ -0.4
RD3-201ENST00000367002 STX2P32856 288 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 SLC16A2P36021 539 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 GYS2P54840 703 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 ASPRV1Q53RT3 343 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 DGKHQ86XP1 1220 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 LY9Q9HBG7 655 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 SERPINB13Q9UIV8 391 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 CFAP74Q9C0B2 1584 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 FTCDO95954 541 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 FOSP01100 380 aaPredicted RBP12.57□□□□□ -0.4
RD3-201ENST00000367002 APBA1Q02410 837 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 DHX40Q8IX18 779 aaKnown RBP12.57□□□□□ -0.4
RD3-201ENST00000367002 STMN2Q93045 179 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 EPC1Q9H2F5 836 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 ADAM21Q9UKJ8 722 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 RRP15Q9Y3B9 282 aaKnown RBP12.57□□□□□ -0.4
RD3-201ENST00000367002 RABGAP1Q9Y3P9 1069 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 XDHP47989 1333 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 FOXN1O15353 648 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 TEX33O43247 280 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 MOCS3O95396 460 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 TBC1D8O95759 1140 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 ALDH1B1P30837 517 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 C2orf54Q08AI8 447 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 FYB2Q5VWT5 728 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 NLRX1Q86UT6 975 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 MB21D1Q8N884 522 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 CCDC17Q96LX7 622 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 THAP9Q9H5L6 903 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 ZCCHC17Q9NP64 241 aaKnown RBP12.57□□□□□ -0.4
RD3-201ENST00000367002 ADAMTS1Q9UHI8 967 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 GINS2Q9Y248 185 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 NCAPD2Q15021 1401 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 NBPF26B4DH59 902 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 KIF28PB7ZC32 967 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 PCK1P35558 622 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 DDIT3P35638 169 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 RABL6Q3YEC7 729 aaPredicted RBP12.57□□□□□ -0.4
RD3-201ENST00000367002 ARMCX5Q6P1M9 558 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 NBPF10Q6P3W6 841 aaKnown RBP12.57□□□□□ -0.4
RD3-201ENST00000367002 PPP1R21Q6ZMI0 780 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 NBPF15Q8N660 670 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 MAIP1Q8WWC4 291 aa12.57□□□□□ -0.4
RD3-201ENST00000367002 UBN2Q6ZU65 1347 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 USP42Q9H9J4 1324 aaKnown RBP12.56□□□□□ -0.4
RD3-201ENST00000367002 BUB1BO60566 1050 aaPredicted RBP12.56□□□□□ -0.4
RD3-201ENST00000367002 KIF11P52732 1056 aa12.56□□□□□ -0.4
RD3-201ENST00000367002 HNRNPH2P55795 449 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms