RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 KCNA6P17658 529 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 ESRRGP62508 458 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 HSP90AA5PQ58FG0 334 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 FBXO11Q86XK2 927 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 CALR3Q96L12 384 aaKnown RBP10.53□□□□□ -0.72
CUX1-203ENST00000360264 KIF9Q9HAQ2 790 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 RNF14Q9UBS8 474 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 A0A1W2PP64 1363 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 LRRIQ4A6NIV6 560 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 PDE1BQ01064 536 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 C1orf228Q6PIY5 440 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 ASXL3Q9C0F0 2248 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 ELF1P32519 619 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 DEUP1Q05D60 604 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 ELF2Q15723 593 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 ARL13BQ3SXY8 428 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 ANKRD35Q8N283 1001 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 DISC1Q9NRI5 854 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 NUB1Q9Y5A7 615 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 TMEM247A6NEH6 219 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 TFAP4Q01664 338 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 MAPKAPK5Q8IW41 473 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 FNBP4Q8N3X1 1017 aaPredicted RBP10.53□□□□□ -0.72
CUX1-203ENST00000360264 NACC1Q96RE7 527 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 SNX25Q9H3E2 840 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 KIAA0232Q92628 1395 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 TRIM15Q9C019 465 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 LMCD1Q9NZU5 365 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 COL17A1Q9UMD9 1497 aaPredicted RBP10.53□□□□□ -0.72
CUX1-203ENST00000360264 UGGT2Q9NYU1 1516 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 MTX1Q13505 466 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 TSPYL6Q8N831 410 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 ZNF212Q9UDV6 495 aa10.53□□□□□ -0.72
CUX1-203ENST00000360264 DRP2Q13474 957 aa10.52□□□□□ -0.72
CUX1-203ENST00000360264 ARHGAP44Q17R89 818 aa10.52□□□□□ -0.72
CUX1-203ENST00000360264 FAM47CQ5HY64 1035 aa10.52□□□□□ -0.72
CUX1-203ENST00000360264 DPP9Q86TI2 863 aa10.52□□□□□ -0.72
CUX1-203ENST00000360264 TNNQ9UQP3 1299 aa10.52□□□□□ -0.72
CUX1-203ENST00000360264 IPO5O00410 1097 aaKnown RBP10.52□□□□□ -0.72
CUX1-203ENST00000360264 CYP2J2P51589 502 aa10.52□□□□□ -0.72
CUX1-203ENST00000360264 RNF168Q8IYW5 571 aaPredicted RBP10.52□□□□□ -0.72
CUX1-203ENST00000360264 CNOT10Q9H9A5 744 aaKnown RBP10.52□□□□□ -0.72
CUX1-203ENST00000360264 ZSCAN20P17040 1043 aaPredicted RBP10.52□□□□□ -0.72
CUX1-203ENST00000360264 ZNF445P59923 1031 aa10.52□□□□□ -0.72
CUX1-203ENST00000360264 LRCH2Q5VUJ6 765 aa10.52□□□□□ -0.72
CUX1-203ENST00000360264 RSRC2Q7L4I2 434 aaKnown RBP10.52□□□□□ -0.72
CUX1-203ENST00000360264 DYMQ7RTS9 669 aa10.52□□□□□ -0.72
CUX1-203ENST00000360264 GTPBP6O43824 516 aaPredicted RBP10.52□□□□□ -0.73
CUX1-203ENST00000360264 BFSP1Q12934 665 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 UNC13AQ9UPW8 1703 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 MYO1FO00160 1098 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 PDE6AP16499 860 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 ATP5JP18859 108 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 PPM1KQ8N3J5 372 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 LRRC8CQ8TDW0 803 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 NRBF2Q96F24 287 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 TMEM206Q9H813 350 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 PCDHA1Q9Y5I3 950 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 H7C0C1 242 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 ATP5OP48047 213 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 AK8Q96MA6 479 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 MRPL40Q9NQ50 206 aaKnown RBP10.52□□□□□ -0.73
CUX1-203ENST00000360264 TEKT2Q9UIF3 430 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 LEMD3Q9Y2U8 911 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.52□□□□□ -0.731e-9■■□□□ 12.2
CUX1-203ENST00000360264 LONP1P36776 959 aaKnown RBP10.52□□□□□ -0.73
CUX1-203ENST00000360264 CPSF3Q9UKF6 684 aaKnown RBP10.52□□□□□ -0.73
CUX1-203ENST00000360264 KLRF2D3W0D1 207 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 GOLGA8FQ08AF8 430 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 GOLGA8DPQ0D2H9 430 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 HNRNPDLO14979 420 aaKnown RBP10.52□□□□□ -0.73
CUX1-203ENST00000360264 OPHN1O60890 802 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 CMA1P23946 247 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 CABLES1Q8TDN4 633 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 KIFC3Q9BVG8 833 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 SUGCTQ9HAC7 445 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 ECM2O94769 699 aaPredicted RBP10.52□□□□□ -0.73
CUX1-203ENST00000360264 RBM6P78332 1123 aaKnown RBP10.52□□□□□ -0.73
CUX1-203ENST00000360264 NCAPG2Q86XI2 1143 aa10.52□□□□□ -0.73
CUX1-203ENST00000360264 U2AF1L4Q8WU68 220 aaKnown RBP10.52□□□□□ -0.73
CUX1-203ENST00000360264 APBA3O96018 575 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 FANCBQ8NB91 859 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 ICA1Q05084 483 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 TAF11Q15544 211 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 KRT39Q6A163 491 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 SLFN12LQ6IEE8 588 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 RFX6Q8HWS3 928 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 DDX5P17844 614 aaKnown RBP10.51□□□□□ -0.73
CUX1-203ENST00000360264 GTF2IP78347 998 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 ARMCX2Q7L311 632 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 RNF169Q8NCN4 708 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 WHAMMQ8TF30 809 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 ZNF148Q9UQR1 794 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 GADL1Q6ZQY3 521 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 ARHGAP27Q6ZUM4 889 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 NELFCDQ8IXH7 590 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 RNF139Q8WU17 664 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 FOXP1Q9H334 677 aaPredicted RBP10.51□□□□□ -0.73
CUX1-203ENST00000360264 MYH9P35579 1960 aaKnown RBP10.51□□□□□ -0.73
CUX1-203ENST00000360264 E7EWF7 191 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms