RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 NUTM2BA6NNL0 878 aaPredicted RBP23.14■■□□□ 1.29
TRIM3-202ENST00000359518 NUTM2EB1AL46 878 aaPredicted RBP23.14■■□□□ 1.29
TRIM3-202ENST00000359518 MOCS3O95396 460 aa23.14■■□□□ 1.29
TRIM3-202ENST00000359518 TXKP42681 527 aa23.14■■□□□ 1.29
TRIM3-202ENST00000359518 GRM4Q14833 912 aa23.14■■□□□ 1.29
TRIM3-202ENST00000359518 MAPKAPK5Q8IW41 473 aa23.14■■□□□ 1.29
TRIM3-202ENST00000359518 AFAP1L1Q8TED9 768 aa23.14■■□□□ 1.29
TRIM3-202ENST00000359518 GPR101Q96P66 508 aaPredicted RBP23.14■■□□□ 1.29
TRIM3-202ENST00000359518 TMEM47Q9BQJ4 181 aa23.14■■□□□ 1.29
TRIM3-202ENST00000359518 BARHL2Q9NY43 387 aa23.14■■□□□ 1.29
TRIM3-202ENST00000359518 KLRF2D3W0D1 207 aa23.14■■□□□ 1.29
TRIM3-202ENST00000359518 DNA2P51530 1060 aa23.14■■□□□ 1.29
TRIM3-202ENST00000359518 MAP9Q49MG5 647 aa23.14■■□□□ 1.29
TRIM3-202ENST00000359518 DGKHQ86XP1 1220 aa23.14■■□□□ 1.29
TRIM3-202ENST00000359518 FLT1P17948 1338 aa23.13■■□□□ 1.29
TRIM3-202ENST00000359518 OR52Z1P0C646 297 aa23.13■■□□□ 1.29
TRIM3-202ENST00000359518 CKAP4Q07065 602 aaKnown RBP23.13■■□□□ 1.29
TRIM3-202ENST00000359518 SBK1Q52WX2 424 aa23.13■■□□□ 1.29
TRIM3-202ENST00000359518 USP17L2Q6R6M4 530 aa23.13■■□□□ 1.29
TRIM3-202ENST00000359518 EHBP1Q8NDI1 1231 aa23.13■■□□□ 1.29
TRIM3-202ENST00000359518 SH3GLB2Q9NR46 395 aa23.13■■□□□ 1.29
TRIM3-202ENST00000359518 EIF3CLB5ME19 914 aaKnown RBP23.13■■□□□ 1.29
TRIM3-202ENST00000359518 CCDC47Q96A33 483 aaKnown RBP23.13■■□□□ 1.29
TRIM3-202ENST00000359518 UIMC1Q96RL1 719 aa23.13■■□□□ 1.29
TRIM3-202ENST00000359518 EIF3CQ99613 913 aaKnown RBP23.13■■□□□ 1.29
TRIM3-202ENST00000359518 SEMA6BQ9H3T3 888 aa23.13■■□□□ 1.29
TRIM3-202ENST00000359518 DEF6Q9H4E7 631 aa23.13■■□□□ 1.29
TRIM3-202ENST00000359518 BIN2Q9UBW5 565 aaPredicted RBP23.13■■□□□ 1.29
TRIM3-202ENST00000359518 SRP68Q9UHB9 627 aaKnown RBP23.13■■□□□ 1.29
TRIM3-202ENST00000359518 IVLP07476 585 aa23.12■■□□□ 1.29
TRIM3-202ENST00000359518 KIAA0895Q8NCT3 520 aa23.12■■□□□ 1.29
TRIM3-202ENST00000359518 SMARCC1Q92922 1105 aaPredicted RBP23.12■■□□□ 1.29
TRIM3-202ENST00000359518 IFIH1Q9BYX4 1025 aaKnown RBP23.12■■□□□ 1.29
TRIM3-202ENST00000359518 A0A1B0GUL6 1792 aa23.12■■□□□ 1.29
TRIM3-202ENST00000359518 SMCO2A6NFE2 343 aa23.12■■□□□ 1.29
TRIM3-202ENST00000359518 DMGDHQ9UI17 866 aaKnown RBP23.12■■□□□ 1.29
TRIM3-202ENST00000359518 NCK2O43639 380 aa23.11■■□□□ 1.29
TRIM3-202ENST00000359518 NFRKBQ6P4R8 1299 aa23.11■■□□□ 1.29
TRIM3-202ENST00000359518 CCNI2Q6ZMN8 369 aaPredicted RBP23.11■■□□□ 1.29
TRIM3-202ENST00000359518 MSL3Q8N5Y2 521 aaKnown RBP23.11■■□□□ 1.29
TRIM3-202ENST00000359518 CCDC155Q8N6L0 562 aa23.11■■□□□ 1.29
TRIM3-202ENST00000359518 LRRC1Q9BTT6 524 aa23.11■■□□□ 1.29
TRIM3-202ENST00000359518 NUP58Q9BVL2 599 aa23.11■■□□□ 1.29
TRIM3-202ENST00000359518 TMEM260Q9NX78 707 aa23.11■■□□□ 1.29
TRIM3-202ENST00000359518 ARHGAP20Q9P2F6 1191 aa23.11■■□□□ 1.29
TRIM3-202ENST00000359518 BICDL2A1A5D9 508 aa23.11■■□□□ 1.29
TRIM3-202ENST00000359518 RRP36Q96EU6 259 aaKnown RBP23.11■■□□□ 1.29
TRIM3-202ENST00000359518 UBA5Q9GZZ9 404 aa23.11■■□□□ 1.29
TRIM3-202ENST00000359518 STRCQ7RTU9 1775 aa23.11■■□□□ 1.29
TRIM3-202ENST00000359518 AKR1B10O60218 316 aa23.11■■□□□ 1.29
TRIM3-202ENST00000359518 PRPF6O94906 941 aaKnown RBP23.11■■□□□ 1.29
TRIM3-202ENST00000359518 EIF4A3P38919 411 aaKnown RBP23.11■■□□□ 1.29
TRIM3-202ENST00000359518 VAV2P52735 878 aa23.11■■□□□ 1.29
TRIM3-202ENST00000359518 SND1Q7KZF4 910 aaKnown RBP eCLIP23.11■■□□□ 1.29
TRIM3-202ENST00000359518 NLRP3Q96P20 1036 aa23.11■■□□□ 1.29
TRIM3-202ENST00000359518 ZC3H4Q9UPT8 1303 aaKnown RBP23.1■■□□□ 1.29
TRIM3-202ENST00000359518 LRRC41Q15345 812 aa23.1■■□□□ 1.29
TRIM3-202ENST00000359518 POTEDQ86YR6 584 aa23.1■■□□□ 1.29
TRIM3-202ENST00000359518 CCDC170Q8IYT3 715 aa23.1■■□□□ 1.29
TRIM3-202ENST00000359518 LINC00116Q8NCU8 138 aa23.1■■□□□ 1.29
TRIM3-202ENST00000359518 GNAQP50148 359 aa23.1■■□□□ 1.29
TRIM3-202ENST00000359518 DNAJC21Q5F1R6 531 aaKnown RBP23.1■■□□□ 1.29
TRIM3-202ENST00000359518 RRAGAQ7L523 313 aa23.1■■□□□ 1.29
TRIM3-202ENST00000359518 NBPF5PQ86XG9 351 aaPredicted RBP23.1■■□□□ 1.29
TRIM3-202ENST00000359518 NOC3LQ8WTT2 800 aaKnown RBP23.1■■□□□ 1.29
TRIM3-202ENST00000359518 PCDHA13Q9Y5I0 950 aa23.1■■□□□ 1.29
TRIM3-202ENST00000359518 DOT1LQ8TEK3 1739 aa23.09■■□□□ 1.29
TRIM3-202ENST00000359518 ZPR1O75312 459 aa23.09■■□□□ 1.29
TRIM3-202ENST00000359518 NONOQ15233 471 aaKnown RBP eCLIP23.09■■□□□ 1.29
TRIM3-202ENST00000359518 TTC19Q6DKK2 380 aaPredicted RBP23.09■■□□□ 1.29
TRIM3-202ENST00000359518 TBCKQ8TEA7 893 aa23.09■■□□□ 1.29
TRIM3-202ENST00000359518 TSPYL1Q9H0U9 437 aa23.09■■□□□ 1.29
TRIM3-202ENST00000359518 AGPSO00116 658 aa23.09■■□□□ 1.29
TRIM3-202ENST00000359518 LDHBP07195 334 aaKnown RBP23.09■■□□□ 1.29
TRIM3-202ENST00000359518 NAP1L1P55209 391 aaKnown RBP23.09■■□□□ 1.29
TRIM3-202ENST00000359518 CREG2Q8IUH2 290 aa23.09■■□□□ 1.29
TRIM3-202ENST00000359518 GLIS3Q8NEA6 775 aa23.09■■□□□ 1.29
TRIM3-202ENST00000359518 MMTAG2Q9BU76 263 aaKnown RBP23.09■■□□□ 1.29
TRIM3-202ENST00000359518 EHD4Q9H223 541 aa23.09■■□□□ 1.29
TRIM3-202ENST00000359518 PHLPP1O60346 1717 aa23.09■■□□□ 1.29
TRIM3-202ENST00000359518 MCM3P25205 808 aa23.08■■□□□ 1.29
TRIM3-202ENST00000359518 KIF11P52732 1056 aa23.08■■□□□ 1.29
TRIM3-202ENST00000359518 FAM114A1Q8IWE2 563 aa23.08■■□□□ 1.29
TRIM3-202ENST00000359518 VIPAS39Q9H9C1 493 aa23.08■■□□□ 1.29
TRIM3-202ENST00000359518 ANKIB1Q9P2G1 1089 aa23.08■■□□□ 1.29
TRIM3-202ENST00000359518 AARSP49588 968 aaKnown RBP eCLIP23.08■■□□□ 1.29
TRIM3-202ENST00000359518 TANGO6Q9C0B7 1094 aa23.08■■□□□ 1.29
TRIM3-202ENST00000359518 SNX12Q9UMY4 172 aa23.08■■□□□ 1.29
TRIM3-202ENST00000359518 GOLGA6BA6NDN3 693 aa23.08■■□□□ 1.28
TRIM3-202ENST00000359518 BUB1O43683 1085 aa23.08■■□□□ 1.28
TRIM3-202ENST00000359518 MYL1P05976 194 aa23.08■■□□□ 1.28
TRIM3-202ENST00000359518 TMC4Q7Z404 712 aa23.08■■□□□ 1.28
TRIM3-202ENST00000359518 RETREG2Q8NC44 543 aa23.08■■□□□ 1.28
TRIM3-202ENST00000359518 NDST4Q9H3R1 872 aa23.08■■□□□ 1.28
TRIM3-202ENST00000359518 PALM3A6NDB9 673 aaPredicted RBP23.07■■□□□ 1.28
TRIM3-202ENST00000359518 USO1O60763 962 aaKnown RBP23.07■■□□□ 1.28
TRIM3-202ENST00000359518 TACC1O75410 805 aa23.07■■□□□ 1.28
TRIM3-202ENST00000359518 ENOX2Q16206 610 aaKnown RBP23.07■■□□□ 1.28
TRIM3-202ENST00000359518 CLEC4GQ6UXB4 293 aa23.07■■□□□ 1.28
TRIM3-202ENST00000359518 PIGSQ96S52 555 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms