RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 ARFGEF1Q9Y6D6 1849 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 POLR2DO15514 142 aaKnown RBP20.94■□□□□ 0.94
SNX11-201ENST00000359238 PRR29P0C7W0 189 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 NAPAP54920 295 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 SAMD7Q7Z3H4 446 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 NUP88Q99567 741 aaPredicted RBP20.94■□□□□ 0.94
SNX11-201ENST00000359238 JMJD4Q9H9V9 463 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 SH3GLB2Q9NR46 395 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 TMEM260Q9NX78 707 aa20.94■□□□□ 0.94
SNX11-201ENST00000359238 ACTN2P35609 894 aa20.93■□□□□ 0.94
SNX11-201ENST00000359238 RSRC2Q7L4I2 434 aaKnown RBP20.93■□□□□ 0.94
SNX11-201ENST00000359238 ADGRF4Q8IZF3 695 aa20.93■□□□□ 0.94
SNX11-201ENST00000359238 CCDC34Q96HJ3 373 aa20.93■□□□□ 0.94
SNX11-201ENST00000359238 ZSCAN12O43309 604 aa20.93■□□□□ 0.94
SNX11-201ENST00000359238 TAL1P17542 331 aaPredicted RBP20.93■□□□□ 0.94
SNX11-201ENST00000359238 CDC25AP30304 524 aa20.93■□□□□ 0.94
SNX11-201ENST00000359238 TBC1D10BQ4KMP7 808 aaPredicted RBP20.93■□□□□ 0.94
SNX11-201ENST00000359238 C4orf32Q8N8J7 132 aa20.93■□□□□ 0.94
SNX11-201ENST00000359238 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.93■□□□□ 0.94
SNX11-201ENST00000359238 SERTAD1Q9UHV2 236 aa20.93■□□□□ 0.94
SNX11-201ENST00000359238 ASTN2O75129 1339 aaPredicted RBP20.92■□□□□ 0.94
SNX11-201ENST00000359238 A0A1W2PRG0 241 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 VWA3AA6NCI4 1184 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 USP17L10C9JJH3 530 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 GH2P01242 217 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 CASP1P29466 404 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 MAP3K9P80192 1104 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 NCAPHQ15003 741 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 JAKMIP3Q5VZ66 844 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 ILDR2Q71H61 639 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 RABGGTAQ92696 567 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 RRP36Q96EU6 259 aaKnown RBP20.92■□□□□ 0.94
SNX11-201ENST00000359238 ZMYND12Q9H0C1 365 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 TMEM60Q9H2L4 133 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 SMCO2A6NFE2 343 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 RPS12P25398 132 aaKnown RBP20.92■□□□□ 0.94
SNX11-201ENST00000359238 SNAP25P60880 206 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 ATP2C1P98194 919 aaPredicted RBP20.92■□□□□ 0.94
SNX11-201ENST00000359238 ABCB5Q2M3G0 1257 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 MIGA2Q7L4E1 593 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 LZTS2Q9BRK4 669 aa20.92■□□□□ 0.94
SNX11-201ENST00000359238 CNOT7Q9UIV1 285 aaKnown RBP20.92■□□□□ 0.94
SNX11-201ENST00000359238 COL2A1P02458 1487 aaPredicted RBP20.91■□□□□ 0.94
SNX11-201ENST00000359238 LMAN1P49257 510 aa20.91■□□□□ 0.94
SNX11-201ENST00000359238 NLRP12P59046 1061 aa20.91■□□□□ 0.94
SNX11-201ENST00000359238 ZNF280AP59817 542 aaPredicted RBP20.91■□□□□ 0.94
SNX11-201ENST00000359238 FANCCQ00597 558 aa20.91■□□□□ 0.94
SNX11-201ENST00000359238 MDM2Q00987 491 aaPredicted RBP20.91■□□□□ 0.94
SNX11-201ENST00000359238 CCDC96Q2M329 555 aa20.91■□□□□ 0.94
SNX11-201ENST00000359238 GOLGA6L1Q8N7Z2 621 aa20.91■□□□□ 0.94
SNX11-201ENST00000359238 SYMPKQ92797 1274 aaKnown RBP20.91■□□□□ 0.94
SNX11-201ENST00000359238 BIN2Q9UBW5 565 aaPredicted RBP20.91■□□□□ 0.94
SNX11-201ENST00000359238 EDIL3O43854 480 aa20.9■□□□□ 0.94
SNX11-201ENST00000359238 IVLP07476 585 aa20.9■□□□□ 0.94
SNX11-201ENST00000359238 BMP6P22004 513 aa20.9■□□□□ 0.94
SNX11-201ENST00000359238 CALML3P27482 149 aa20.9■□□□□ 0.94
SNX11-201ENST00000359238 SYT17Q9BSW7 474 aa20.9■□□□□ 0.94
SNX11-201ENST00000359238 PARD6BQ9BYG5 372 aa20.9■□□□□ 0.94
SNX11-201ENST00000359238 EPC1Q9H2F5 836 aa20.9■□□□□ 0.94
SNX11-201ENST00000359238 IKBKBO14920 756 aa20.9■□□□□ 0.94
SNX11-201ENST00000359238 ECE1P42892 770 aa20.9■□□□□ 0.94
SNX11-201ENST00000359238 ICA1Q05084 483 aa20.9■□□□□ 0.94
SNX11-201ENST00000359238 ASPRV1Q53RT3 343 aa20.9■□□□□ 0.94
SNX11-201ENST00000359238 KIAA1755Q5JYT7 1200 aa20.9■□□□□ 0.94
SNX11-201ENST00000359238 CCDC84Q86UT8 332 aaPredicted RBP20.9■□□□□ 0.94
SNX11-201ENST00000359238 GEMIN8Q9NWZ8 242 aaKnown RBP20.9■□□□□ 0.94
SNX11-201ENST00000359238 PPP2R3AQ06190 1150 aa20.89■□□□□ 0.94
SNX11-201ENST00000359238 ICE2Q659A1 982 aa20.89■□□□□ 0.94
SNX11-201ENST00000359238 TMEM179Q6ZVK1 233 aa20.89■□□□□ 0.94
SNX11-201ENST00000359238 DAGLBQ8NCG7 672 aa20.89■□□□□ 0.94
SNX11-201ENST00000359238 CNNM3Q8NE01 707 aa20.89■□□□□ 0.94
SNX11-201ENST00000359238 KANSL2Q9H9L4 492 aa20.89■□□□□ 0.94
SNX11-201ENST00000359238 CEP131Q9UPN4 1083 aa20.89■□□□□ 0.94
SNX11-201ENST00000359238 MRFAP1Q9Y605 127 aa20.89■□□□□ 0.94
SNX11-201ENST00000359238 MAP2K7O14733 419 aa20.89■□□□□ 0.93
SNX11-201ENST00000359238 ACTN4O43707 911 aaKnown RBP20.89■□□□□ 0.93
SNX11-201ENST00000359238 FKBP1CQ5VVH2 108 aa20.89■□□□□ 0.93
SNX11-201ENST00000359238 SEC63Q9UGP8 760 aaKnown RBP20.89■□□□□ 0.93
SNX11-201ENST00000359238 HERC5Q9UII4 1024 aaKnown RBP20.89■□□□□ 0.93
SNX11-201ENST00000359238 PCDHA5Q9Y5H7 936 aa20.89■□□□□ 0.93
SNX11-201ENST00000359238 GOLGA6L9A6NEM1 432 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 PP2D1A8MPX8 630 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 CBFA2T2O43439 604 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 ZNF579Q8NAF0 562 aaKnown RBP20.88■□□□□ 0.93
SNX11-201ENST00000359238 STAMQ92783 540 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 CCDC194A0A1B0GVG4 234 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 CCDC151A5D8V7 595 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 H3BQF6 201 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 LMNB1P20700 586 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 GTF2A1P52655 376 aaPredicted RBP20.88■□□□□ 0.93
SNX11-201ENST00000359238 RASA3Q14644 834 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 BRD3Q15059 726 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 LONRF2Q1L5Z9 754 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 LEKR1Q6ZMV7 388 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 FAM83AQ86UY5 434 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 SPICE1Q8N0Z3 855 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 CCDC148Q8NFR7 591 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 DPF2Q92785 391 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 DHX58Q96C10 678 aa20.88■□□□□ 0.93
SNX11-201ENST00000359238 TUBE1Q9UJT0 475 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms