RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 TSPY3P0CV98 308 aa18.85■□□□□ 0.61
IFT20-202ENST00000357896 TSPY8P0CW00 308 aa18.85■□□□□ 0.61
IFT20-202ENST00000357896 GNAT2P19087 354 aa18.85■□□□□ 0.61
IFT20-202ENST00000357896 TDO2P48775 406 aa18.85■□□□□ 0.61
IFT20-202ENST00000357896 GRB10Q13322 594 aa18.85■□□□□ 0.61
IFT20-202ENST00000357896 PPP4R3BQ5MIZ7 849 aa18.85■□□□□ 0.61
IFT20-202ENST00000357896 TMEM63BQ5T3F8 832 aa18.85■□□□□ 0.61
IFT20-202ENST00000357896 NEDD1Q8NHV4 660 aa18.85■□□□□ 0.61
IFT20-202ENST00000357896 WDR11Q9BZH6 1224 aa18.85■□□□□ 0.61
IFT20-202ENST00000357896 ADD3Q9UEY8 706 aaKnown RBP18.85■□□□□ 0.61
IFT20-202ENST00000357896 PIEZO1Q92508 2521 aa18.85■□□□□ 0.61
IFT20-202ENST00000357896 LRRC37A2A6NM11 1700 aa18.84■□□□□ 0.61
IFT20-202ENST00000357896 LOC102724159A0A0B4J2E5 919 aa18.84■□□□□ 0.61
IFT20-202ENST00000357896 MYL3P08590 195 aa18.84■□□□□ 0.61
IFT20-202ENST00000357896 MS4A1P11836 297 aa18.84■□□□□ 0.61
IFT20-202ENST00000357896 PDE4BQ07343 736 aa18.84■□□□□ 0.61
IFT20-202ENST00000357896 BFSP2Q13515 415 aa18.84■□□□□ 0.61
IFT20-202ENST00000357896 PWP2Q15269 919 aaKnown RBP18.84■□□□□ 0.61
IFT20-202ENST00000357896 FAM47CQ5HY64 1035 aa18.84■□□□□ 0.61
IFT20-202ENST00000357896 PANK1Q8TE04 598 aa18.84■□□□□ 0.61
IFT20-202ENST00000357896 MYH4Q9Y623 1939 aa18.84■□□□□ 0.61
IFT20-202ENST00000357896 FAM86C2PA6NEL3 165 aa18.83■□□□□ 0.6
IFT20-202ENST00000357896 KPNA6O60684 536 aa18.83■□□□□ 0.6
IFT20-202ENST00000357896 APPP05067 770 aa18.83■□□□□ 0.6
IFT20-202ENST00000357896 KCNJ6P48051 423 aa18.83■□□□□ 0.6
IFT20-202ENST00000357896 PTPN11Q06124 597 aaPredicted RBP18.83■□□□□ 0.6
IFT20-202ENST00000357896 NFRKBQ6P4R8 1299 aa18.83■□□□□ 0.6
IFT20-202ENST00000357896 NSMFQ6X4W1 530 aa18.83■□□□□ 0.6
IFT20-202ENST00000357896 APPBP2Q92624 585 aa18.83■□□□□ 0.6
IFT20-202ENST00000357896 KHSRPQ92945 711 aaKnown RBP eCLIP18.83■□□□□ 0.6
IFT20-202ENST00000357896 DDX49Q9Y6V7 483 aaKnown RBP18.83■□□□□ 0.6
IFT20-202ENST00000357896 PLIN4Q96Q06 1357 aa18.82■□□□□ 0.6
IFT20-202ENST00000357896 RAD50Q92878 1312 aa18.82■□□□□ 0.6
IFT20-202ENST00000357896 PRR33A8MZF0 331 aa18.82■□□□□ 0.6
IFT20-202ENST00000357896 LPXNO60711 386 aa18.82■□□□□ 0.6
IFT20-202ENST00000357896 SLC3A2P08195 630 aaKnown RBP18.82■□□□□ 0.6
IFT20-202ENST00000357896 MCCP23508 829 aa18.82■□□□□ 0.6
IFT20-202ENST00000357896 LRRFIP1Q32MZ4 808 aaKnown RBP18.82■□□□□ 0.6
IFT20-202ENST00000357896 NBPF20Q3BBV1 942 aa18.82■□□□□ 0.6
IFT20-202ENST00000357896 MUM1L1Q5H9M0 696 aa18.82■□□□□ 0.6
IFT20-202ENST00000357896 SIRT2Q8IXJ6 389 aa18.82■□□□□ 0.6
IFT20-202ENST00000357896 NOD1Q9Y239 953 aa18.82■□□□□ 0.6
IFT20-202ENST00000357896 MYH7P12883 1935 aa18.81■□□□□ 0.6
IFT20-202ENST00000357896 ARHGEF15O94989 841 aa18.81■□□□□ 0.6
IFT20-202ENST00000357896 TFAP4Q01664 338 aa18.81■□□□□ 0.6
IFT20-202ENST00000357896 RCSD1Q6JBY9 416 aa18.81■□□□□ 0.6
IFT20-202ENST00000357896 ALYREFQ86V81 257 aaKnown RBP18.81■□□□□ 0.6
IFT20-202ENST00000357896 KBTBD3Q8NAB2 608 aa18.81■□□□□ 0.6
IFT20-202ENST00000357896 OR6J1Q8NGC5 347 aa18.81■□□□□ 0.6
IFT20-202ENST00000357896 OSBP2Q969R2 916 aa18.81■□□□□ 0.6
IFT20-202ENST00000357896 ZBED2Q9BTP6 218 aa18.81■□□□□ 0.6
IFT20-202ENST00000357896 NACAP1Q9BZK3 213 aa18.81■□□□□ 0.6
IFT20-202ENST00000357896 CCPG1Q9ULG6 757 aa18.81■□□□□ 0.6
IFT20-202ENST00000357896 PRR12Q9ULL5 1215 aa18.81■□□□□ 0.6
IFT20-202ENST00000357896 RBM47A0AV96 593 aaKnown RBP18.8■□□□□ 0.6
IFT20-202ENST00000357896 PATL2C9JE40 543 aaKnown RBP18.8■□□□□ 0.6
IFT20-202ENST00000357896 NKRFO15226 690 aaKnown RBP eCLIP18.8■□□□□ 0.6
IFT20-202ENST00000357896 RNF113AO15541 343 aaKnown RBP18.8■□□□□ 0.6
IFT20-202ENST00000357896 GPAA1O43292 621 aa18.8■□□□□ 0.6
IFT20-202ENST00000357896 ICAM1P05362 532 aa18.8■□□□□ 0.6
IFT20-202ENST00000357896 ZFYP08048 801 aaPredicted RBP18.8■□□□□ 0.6
IFT20-202ENST00000357896 KCTD1Q719H9 257 aa18.8■□□□□ 0.6
IFT20-202ENST00000357896 CCDC155Q8N6L0 562 aa18.8■□□□□ 0.6
IFT20-202ENST00000357896 MPHOSPH6Q99547 160 aaKnown RBP18.8■□□□□ 0.6
IFT20-202ENST00000357896 EPB41L4AQ9HCS5 686 aaPredicted RBP18.8■□□□□ 0.6
IFT20-202ENST00000357896 MUC6Q6W4X9 2439 aa18.79■□□□□ 0.6
IFT20-202ENST00000357896 ALDH5A1P51649 535 aaPredicted RBP18.79■□□□□ 0.6
IFT20-202ENST00000357896 BAATQ14032 418 aaPredicted RBP18.79■□□□□ 0.6
IFT20-202ENST00000357896 IFNL3Q8IZI9 196 aa18.79■□□□□ 0.6
IFT20-202ENST00000357896 GJD3Q8N144 294 aa18.79■□□□□ 0.6
IFT20-202ENST00000357896 PURBQ96QR8 312 aaKnown RBP18.79■□□□□ 0.6
IFT20-202ENST00000357896 LRRCC1Q9C099 1032 aa18.79■□□□□ 0.6
IFT20-202ENST00000357896 CHMP4BQ9H444 224 aaKnown RBP18.79■□□□□ 0.6
IFT20-202ENST00000357896 CD320Q9NPF0 282 aa18.79■□□□□ 0.6
IFT20-202ENST00000357896 ECHDC1Q9NTX5 307 aa18.79■□□□□ 0.6
IFT20-202ENST00000357896 ZBTB40Q9NUA8 1239 aa18.79■□□□□ 0.6
IFT20-202ENST00000357896 STX8Q9UNK0 236 aa18.79■□□□□ 0.6
IFT20-202ENST00000357896 A6NJR5 290 aa18.78■□□□□ 0.6
IFT20-202ENST00000357896 PARNO95453 639 aaKnown RBP18.78■□□□□ 0.6
IFT20-202ENST00000357896 ALADP13716 330 aa18.78■□□□□ 0.6
IFT20-202ENST00000357896 SNAP25P60880 206 aa18.78■□□□□ 0.6
IFT20-202ENST00000357896 PPP2R5BQ15173 497 aa18.78■□□□□ 0.6
IFT20-202ENST00000357896 CAGE1Q8TC20 777 aa18.78■□□□□ 0.6
IFT20-202ENST00000357896 AFAP1L1Q8TED9 768 aa18.78■□□□□ 0.6
IFT20-202ENST00000357896 CHMP4CQ96CF2 233 aa18.78■□□□□ 0.6
IFT20-202ENST00000357896 UBE2ZQ9H832 354 aaPredicted RBP18.78■□□□□ 0.6
IFT20-202ENST00000357896 DDX19BQ9UMR2 479 aa18.78■□□□□ 0.6
IFT20-202ENST00000357896 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.77■□□□□ 0.6
IFT20-202ENST00000357896 WDR5P61964 334 aaKnown RBP18.77■□□□□ 0.6
IFT20-202ENST00000357896 LEXMQ3ZCV2 418 aa18.77■□□□□ 0.6
IFT20-202ENST00000357896 FAM178BQ8IXR5 827 aa18.77■□□□□ 0.6
IFT20-202ENST00000357896 SCFD2Q8WU76 684 aa18.77■□□□□ 0.6
IFT20-202ENST00000357896 SCN5AQ14524 2016 aa18.77■□□□□ 0.6
IFT20-202ENST00000357896 LCHNA4D1U4 455 aa18.76■□□□□ 0.59
IFT20-202ENST00000357896 PDE4DQ08499 809 aa18.76■□□□□ 0.59
IFT20-202ENST00000357896 PTGISQ16647 500 aa18.76■□□□□ 0.59
IFT20-202ENST00000357896 GDPD5Q8WTR4 605 aa18.76■□□□□ 0.59
IFT20-202ENST00000357896 GPATCH3Q96I76 525 aa18.76■□□□□ 0.59
IFT20-202ENST00000357896 TGS1Q96RS0 853 aaKnown RBP18.76■□□□□ 0.59
IFT20-202ENST00000357896 RAD9AQ99638 391 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms