RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 RPS6P62753 249 aaKnown RBP17.88■□□□□ 0.45
TRIM13-201ENST00000356017 PRKCZQ05513 592 aa17.88■□□□□ 0.45
TRIM13-201ENST00000356017 IRF5Q13568 498 aa17.88■□□□□ 0.45
TRIM13-201ENST00000356017 BAATQ14032 418 aaPredicted RBP17.88■□□□□ 0.45
TRIM13-201ENST00000356017 PKN2Q16513 984 aaKnown RBP17.88■□□□□ 0.45
TRIM13-201ENST00000356017 USP6NLQ92738 828 aa17.88■□□□□ 0.45
TRIM13-201ENST00000356017 DIS3Q9Y2L1 958 aaKnown RBP17.88■□□□□ 0.45
TRIM13-201ENST00000356017 DNAJC25-GNG10A0A024R161 153 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 SMCO2A6NFE2 343 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 PIK3CDO00329 1044 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 OPLAHO14841 1288 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 HSD17B4P51659 736 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 FAM184AQ8NB25 1140 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 RAET1EQ8TD07 263 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 INTS4Q96HW7 963 aaKnown RBP17.87■□□□□ 0.45
TRIM13-201ENST00000356017 APBA2Q99767 749 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 ALG1Q9BT22 464 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 ZMYND12Q9H0C1 365 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 C6orf50Q9HD87 102 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 GABRQQ9UN88 632 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 MYH6P13533 1939 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 PGK2P07205 417 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 CALML3P27482 149 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 ADCY7P51828 1080 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 TYW1BQ6NUM6 668 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 TRMT44Q8IYL2 757 aaKnown RBP17.87■□□□□ 0.45
TRIM13-201ENST00000356017 RIC8AQ9NPQ8 531 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 VPS54Q9P1Q0 977 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 ADD3Q9UEY8 706 aaKnown RBP17.87■□□□□ 0.45
TRIM13-201ENST00000356017 SMC3Q9UQE7 1217 aa17.87■□□□□ 0.45
TRIM13-201ENST00000356017 COBLO75128 1261 aa17.86■□□□□ 0.45
TRIM13-201ENST00000356017 CYP2B6P20813 491 aa17.86■□□□□ 0.45
TRIM13-201ENST00000356017 NLRP5P59047 1200 aa17.86■□□□□ 0.45
TRIM13-201ENST00000356017 TRIM29Q14134 588 aa17.86■□□□□ 0.45
TRIM13-201ENST00000356017 BECN1Q14457 450 aa17.86■□□□□ 0.45
TRIM13-201ENST00000356017 ZNF792Q3KQV3 632 aa17.86■□□□□ 0.45
TRIM13-201ENST00000356017 GALNT17Q6IS24 598 aa17.86■□□□□ 0.45
TRIM13-201ENST00000356017 FAM133AQ8N9E0 248 aa17.86■□□□□ 0.45
TRIM13-201ENST00000356017 DNERQ8NFT8 737 aa17.86■□□□□ 0.45
TRIM13-201ENST00000356017 BICD2Q8TD16 824 aa17.86■□□□□ 0.45
TRIM13-201ENST00000356017 TBC1D5Q92609 795 aa17.86■□□□□ 0.45
TRIM13-201ENST00000356017 PTPN22Q9Y2R2 807 aa17.86■□□□□ 0.45
TRIM13-201ENST00000356017 MGAMO43451 1857 aa17.85■□□□□ 0.45
TRIM13-201ENST00000356017 HSP90AA1P07900 732 aaKnown RBP17.85■□□□□ 0.45
TRIM13-201ENST00000356017 MCTP2Q6DN12 878 aa17.85■□□□□ 0.45
TRIM13-201ENST00000356017 SLC30A10Q6XR72 485 aa17.85■□□□□ 0.45
TRIM13-201ENST00000356017 ZNF467Q7Z7K2 595 aaPredicted RBP17.85■□□□□ 0.45
TRIM13-201ENST00000356017 SYTL5Q8TDW5 730 aaPredicted RBP17.85■□□□□ 0.45
TRIM13-201ENST00000356017 PXYLP1Q8TE99 480 aa17.85■□□□□ 0.45
TRIM13-201ENST00000356017 AIFM3Q96NN9 605 aa17.85■□□□□ 0.45
TRIM13-201ENST00000356017 MPHOSPH6Q99547 160 aaKnown RBP17.85■□□□□ 0.45
TRIM13-201ENST00000356017 ZNF236Q9UL36 1845 aa17.84■□□□□ 0.45
TRIM13-201ENST00000356017 LOC102724159A0A0B4J2E5 919 aa17.84■□□□□ 0.45
TRIM13-201ENST00000356017 B4DLN1 442 aa17.84■□□□□ 0.45
TRIM13-201ENST00000356017 MEIS2O14770 477 aa17.84■□□□□ 0.45
TRIM13-201ENST00000356017 HOXA13P31271 388 aaPredicted RBP17.84■□□□□ 0.45
TRIM13-201ENST00000356017 CNTN2Q02246 1040 aa17.84■□□□□ 0.45
TRIM13-201ENST00000356017 PWP2Q15269 919 aaKnown RBP17.84■□□□□ 0.45
TRIM13-201ENST00000356017 MSL3Q8N5Y2 521 aaKnown RBP17.84■□□□□ 0.45
TRIM13-201ENST00000356017 MAML3Q96JK9 1138 aa17.84■□□□□ 0.45
TRIM13-201ENST00000356017 CASP8AP2Q9UKL3 1982 aa17.83■□□□□ 0.45
TRIM13-201ENST00000356017 DTNBO60941 627 aa17.83■□□□□ 0.45
TRIM13-201ENST00000356017 OLFML2BQ68BL8 750 aa17.83■□□□□ 0.45
TRIM13-201ENST00000356017 USP17L6PQ6QN14 398 aa17.83■□□□□ 0.45
TRIM13-201ENST00000356017 NSUN6Q8TEA1 469 aaKnown RBP17.83■□□□□ 0.45
TRIM13-201ENST00000356017 ASB14A6NK59 587 aa17.83■□□□□ 0.44
TRIM13-201ENST00000356017 SPDYE3A6NKU9 549 aa17.83■□□□□ 0.44
TRIM13-201ENST00000356017 ADCY3O60266 1144 aa17.83■□□□□ 0.44
TRIM13-201ENST00000356017 FOSP01100 380 aaPredicted RBP17.83■□□□□ 0.44
TRIM13-201ENST00000356017 GJB2P29033 226 aa17.83■□□□□ 0.44
TRIM13-201ENST00000356017 FBXO46Q6PJ61 603 aaPredicted RBP17.83■□□□□ 0.44
TRIM13-201ENST00000356017 FCHSD1Q86WN1 690 aa17.83■□□□□ 0.44
TRIM13-201ENST00000356017 SLAIN1Q8ND83 568 aa17.83■□□□□ 0.44
TRIM13-201ENST00000356017 NPLOC4Q8TAT6 608 aa17.83■□□□□ 0.44
TRIM13-201ENST00000356017 C8orf76Q96K31 380 aa17.83■□□□□ 0.44
TRIM13-201ENST00000356017 RMDN3Q96TC7 470 aa17.83■□□□□ 0.44
TRIM13-201ENST00000356017 PHF20Q9BVI0 1012 aa17.83■□□□□ 0.44
TRIM13-201ENST00000356017 PCDHA4Q9UN74 947 aa17.83■□□□□ 0.44
TRIM13-201ENST00000356017 PLXNB2O15031 1838 aa17.83■□□□□ 0.44
TRIM13-201ENST00000356017 SMCHD1A6NHR9 2005 aa17.82■□□□□ 0.44
TRIM13-201ENST00000356017 ZSWIM8A7E2V4 1837 aa17.82■□□□□ 0.44
TRIM13-201ENST00000356017 AP3B2Q13367 1082 aa17.82■□□□□ 0.44
TRIM13-201ENST00000356017 MAMDC4Q6UXC1 1216 aa17.82■□□□□ 0.44
TRIM13-201ENST00000356017 REXO1Q8N1G1 1221 aaKnown RBP17.82■□□□□ 0.44
TRIM13-201ENST00000356017 DAGLBQ8NCG7 672 aa17.82■□□□□ 0.44
TRIM13-201ENST00000356017 BRMS1Q9HCU9 246 aa17.82■□□□□ 0.44
TRIM13-201ENST00000356017 PTCH2Q9Y6C5 1203 aa17.82■□□□□ 0.44
TRIM13-201ENST00000356017 SOWAHBA6NEL2 793 aa17.81■□□□□ 0.44
TRIM13-201ENST00000356017 GRK4P32298 578 aa17.81■□□□□ 0.44
TRIM13-201ENST00000356017 CLK2P49760 499 aaKnown RBP17.81■□□□□ 0.44
TRIM13-201ENST00000356017 ARHGEF16Q5VV41 709 aa17.81■□□□□ 0.44
TRIM13-201ENST00000356017 BLIDQ8IZY5 108 aa17.81■□□□□ 0.44
TRIM13-201ENST00000356017 TAAR1Q96RJ0 339 aa17.81■□□□□ 0.44
TRIM13-201ENST00000356017 IWS1Q96ST2 819 aa17.81■□□□□ 0.44
TRIM13-201ENST00000356017 TINF2Q9BSI4 451 aa17.81■□□□□ 0.44
TRIM13-201ENST00000356017 EHMT1Q9H9B1 1298 aa17.81■□□□□ 0.44
TRIM13-201ENST00000356017 COL20A1Q9P218 1284 aa17.81■□□□□ 0.44
TRIM13-201ENST00000356017 SYNGAP1Q96PV0 1343 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 PDCP20941 246 aa17.8■□□□□ 0.44
TRIM13-201ENST00000356017 ALDH5A1P51649 535 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms