RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 CTIFO43310 598 aaKnown RBP13.6□□□□□ -0.23
COLCA1-201ENST00000355430 ECE2O60344 883 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 VWA3BQ502W6 1294 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 NCAPH2Q6IBW4 605 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 CCDC84Q86UT8 332 aaPredicted RBP13.6□□□□□ -0.23
COLCA1-201ENST00000355430 CCDC26Q8TAB7 109 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 HYOU1Q9Y4L1 999 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 CASP1P29466 404 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 LIFRP42702 1097 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 DYNLL1P63167 89 aaKnown RBP13.6□□□□□ -0.23
COLCA1-201ENST00000355430 KLHL30Q0D2K2 578 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 STRN3Q13033 797 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 EZH2Q15910 746 aaKnown RBP13.6□□□□□ -0.23
COLCA1-201ENST00000355430 E4F1Q66K89 784 aaPredicted RBP13.6□□□□□ -0.23
COLCA1-201ENST00000355430 SHC4Q6S5L8 630 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 FUCA2Q9BTY2 467 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 ABCB6Q9NP58 842 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 ST7Q9NRC1 585 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 KCNG1Q9UIX4 513 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 FOXN1O15353 648 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 FOXO4P98177 505 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 TTC16Q8NEE8 873 aa13.6□□□□□ -0.23
COLCA1-201ENST00000355430 LSM14BQ9BX40 385 aaKnown RBP13.6□□□□□ -0.23
COLCA1-201ENST00000355430 ZNF277Q9NRM2 450 aaPredicted RBP13.6□□□□□ -0.23
COLCA1-201ENST00000355430 GOLGA8HP0CJ92 632 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 HOXD10P28358 340 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 CDC25AP30304 524 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 TBC1D10BQ4KMP7 808 aaPredicted RBP13.59□□□□□ -0.23
COLCA1-201ENST00000355430 SLFN13Q68D06 897 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 CC2D1AQ6P1N0 951 aaPredicted RBP13.59□□□□□ -0.23
COLCA1-201ENST00000355430 CCDC25Q86WR0 208 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 POTEDQ86YR6 584 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 PNMA1Q8ND90 353 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 TRIM31Q9BZY9 425 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 SLC39A2Q9NP94 309 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 MYO1AQ9UBC5 1043 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 FER1L4A9Z1Z3 1794 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 EPB41P11171 864 aaKnown RBP13.59□□□□□ -0.23
COLCA1-201ENST00000355430 ZNF658Q5TYW1 1059 aaPredicted RBP13.59□□□□□ -0.23
COLCA1-201ENST00000355430 CNOT6LQ96LI5 555 aaKnown RBP13.59□□□□□ -0.23
COLCA1-201ENST00000355430 PAIP2Q9BPZ3 127 aaKnown RBP13.59□□□□□ -0.23
COLCA1-201ENST00000355430 TUBGCP2Q9BSJ2 902 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 TSKSQ9UJT2 592 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 DIP2AQ14689 1571 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 PREX1Q8TCU6 1659 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 MFAP3LO75121 409 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 HERC4Q5GLZ8 1057 aaPredicted RBP13.59□□□□□ -0.23
COLCA1-201ENST00000355430 RRP15Q9Y3B9 282 aaKnown RBP13.59□□□□□ -0.23
COLCA1-201ENST00000355430 CETN3O15182 167 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 POLR2MP0CAP2 368 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 ACTN2P35609 894 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 MKRN3Q13064 507 aaKnown RBP13.59□□□□□ -0.23
COLCA1-201ENST00000355430 NFIXQ14938 502 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 TTC19Q6DKK2 380 aaPredicted RBP13.59□□□□□ -0.23
COLCA1-201ENST00000355430 REXO1Q8N1G1 1221 aaKnown RBP13.59□□□□□ -0.23
COLCA1-201ENST00000355430 STRBPQ96SI9 672 aaKnown RBP13.59□□□□□ -0.23
COLCA1-201ENST00000355430 PI4KBQ9UBF8 816 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 RWDD2AQ9UIY3 292 aa13.59□□□□□ -0.23
COLCA1-201ENST00000355430 ARHGEF35A5YM69 484 aa13.58□□□□□ -0.23
COLCA1-201ENST00000355430 RPL13P26373 211 aaKnown RBP13.58□□□□□ -0.23
COLCA1-201ENST00000355430 AOC3Q16853 763 aa13.58□□□□□ -0.23
COLCA1-201ENST00000355430 ADD3Q9UEY8 706 aaKnown RBP13.58□□□□□ -0.23
COLCA1-201ENST00000355430 RNF40O75150 1001 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 OR52Z1P0C646 297 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 PTPREP23469 700 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 FNBP4Q8N3X1 1017 aaPredicted RBP13.58□□□□□ -0.24
COLCA1-201ENST00000355430 MARCH10Q8NA82 808 aaPredicted RBP13.58□□□□□ -0.24
COLCA1-201ENST00000355430 EXOC7Q9UPT5 735 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 CYP2D7A0A087X1C5 515 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 A0A0G2JLW4 131 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 ATP1A2P50993 1020 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 C2orf54Q08AI8 447 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 KRT31Q15323 416 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 ATG9AQ7Z3C6 839 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 ANKRD13CQ8N6S4 541 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 STMN4Q9H169 189 aaPredicted RBP13.58□□□□□ -0.24
COLCA1-201ENST00000355430 A0A1W2PRG0 241 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 FAM170AA1A519 330 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 GOLGA8KD6RF30 607 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 CTDNEP1O95476 244 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 RASGRF1Q13972 1273 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 RPS6KA1Q15418 735 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 CAPS2Q9BXY5 557 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 CCPG1Q9ULG6 757 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 ADAMTS13Q76LX8 1427 aa13.58□□□□□ -0.24
COLCA1-201ENST00000355430 KRT26Q7Z3Y9 468 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 SP8Q8IXZ3 490 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 MSANTD4Q8NCY6 345 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 OXER1Q8TDS5 423 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 IQCDQ96DY2 449 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 PTPRUQ92729 1446 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 HLFQ16534 295 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 FBXO11Q86XK2 927 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 EXOC4Q96A65 974 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 LY9Q9HBG7 655 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 TESPA1A2RU30 521 aaPredicted RBP13.57□□□□□ -0.24
COLCA1-201ENST00000355430 CCDC169A6NNP5 214 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 DDX39AO00148 427 aaKnown RBP13.57□□□□□ -0.24
COLCA1-201ENST00000355430 CTNNA2P26232 953 aa13.57□□□□□ -0.24
COLCA1-201ENST00000355430 PTPROQ16827 1216 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms