RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 HOXA13P31271 388 aaPredicted RBP23.31■■□□□ 1.32
TRIM4-202ENST00000354241 POTEDQ86YR6 584 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 ANKRD13AQ8IZ07 590 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 CPXCR1Q8N123 301 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 CNKSR2Q8WXI2 1034 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 PANK2Q9BZ23 570 aa23.31■■□□□ 1.32
TRIM4-202ENST00000354241 EDIL3O43854 480 aa23.3■■□□□ 1.32
TRIM4-202ENST00000354241 CFBP00751 764 aa23.3■■□□□ 1.32
TRIM4-202ENST00000354241 SASS6Q6UVJ0 657 aa23.3■■□□□ 1.32
TRIM4-202ENST00000354241 RBM46Q8TBY0 533 aaKnown RBP23.3■■□□□ 1.32
TRIM4-202ENST00000354241 SLC38A10Q9HBR0 1119 aa23.3■■□□□ 1.32
TRIM4-202ENST00000354241 POLR2DO15514 142 aaKnown RBP23.29■■□□□ 1.32
TRIM4-202ENST00000354241 ZBED4O75132 1171 aa23.29■■□□□ 1.32
TRIM4-202ENST00000354241 LONP1P36776 959 aaKnown RBP23.29■■□□□ 1.32
TRIM4-202ENST00000354241 PRPHP41219 470 aa23.29■■□□□ 1.32
TRIM4-202ENST00000354241 LONRF3Q496Y0 759 aa23.29■■□□□ 1.32
TRIM4-202ENST00000354241 PDILTQ8N807 584 aa23.29■■□□□ 1.32
TRIM4-202ENST00000354241 CLMNQ96JQ2 1002 aa23.29■■□□□ 1.32
TRIM4-202ENST00000354241 P2RX7Q99572 595 aaKnown RBP23.29■■□□□ 1.32
TRIM4-202ENST00000354241 RAVER2Q9HCJ3 691 aaKnown RBP23.29■■□□□ 1.32
TRIM4-202ENST00000354241 FOSP01100 380 aaPredicted RBP23.29■■□□□ 1.32
TRIM4-202ENST00000354241 TYRO3Q06418 890 aa23.29■■□□□ 1.32
TRIM4-202ENST00000354241 MAP1SQ66K74 1059 aaPredicted RBP23.29■■□□□ 1.32
TRIM4-202ENST00000354241 KRBA2Q6ZNG9 492 aa23.29■■□□□ 1.32
TRIM4-202ENST00000354241 ARMC9Q7Z3E5 817 aa23.29■■□□□ 1.32
TRIM4-202ENST00000354241 CNNM3Q8NE01 707 aa23.29■■□□□ 1.32
TRIM4-202ENST00000354241 ATG4CQ96DT6 458 aa23.29■■□□□ 1.32
TRIM4-202ENST00000354241 RRAGCQ9HB90 399 aa23.29■■□□□ 1.32
TRIM4-202ENST00000354241 RLFQ13129 1914 aa23.29■■□□□ 1.32
TRIM4-202ENST00000354241 COL11A1P12107 1806 aaPredicted RBP23.28■■□□□ 1.32
TRIM4-202ENST00000354241 GCOM1H8Y6P7 765 aaPredicted RBP23.28■■□□□ 1.32
TRIM4-202ENST00000354241 PIK3CDO00329 1044 aa23.28■■□□□ 1.32
TRIM4-202ENST00000354241 SLC37A4O43826 429 aa23.28■■□□□ 1.32
TRIM4-202ENST00000354241 POLR2MP0CAP2 368 aa23.28■■□□□ 1.32
TRIM4-202ENST00000354241 CALCRLQ16602 461 aa23.28■■□□□ 1.32
TRIM4-202ENST00000354241 SH3D19Q5HYK7 790 aa23.28■■□□□ 1.32
TRIM4-202ENST00000354241 PPP4R3AQ6IN85 833 aa23.28■■□□□ 1.32
TRIM4-202ENST00000354241 TBC1D5Q92609 795 aa23.28■■□□□ 1.32
TRIM4-202ENST00000354241 ERCC4Q92889 916 aaPredicted RBP23.28■■□□□ 1.32
TRIM4-202ENST00000354241 OTUD5Q96G74 571 aa23.28■■□□□ 1.32
TRIM4-202ENST00000354241 FCHSD1Q86WN1 690 aa23.27■■□□□ 1.32
TRIM4-202ENST00000354241 RNF214Q8ND24 703 aa23.27■■□□□ 1.32
TRIM4-202ENST00000354241 NAP1L4Q99733 375 aaKnown RBP23.27■■□□□ 1.32
TRIM4-202ENST00000354241 DDX25Q9UHL0 483 aaKnown RBP23.27■■□□□ 1.32
TRIM4-202ENST00000354241 GCFC2P16383 781 aaKnown RBP23.27■■□□□ 1.32
TRIM4-202ENST00000354241 ERO1BQ86YB8 467 aa23.27■■□□□ 1.32
TRIM4-202ENST00000354241 ZNF408Q9H9D4 720 aa23.27■■□□□ 1.32
TRIM4-202ENST00000354241 SERTAD1Q9UHV2 236 aa23.27■■□□□ 1.32
TRIM4-202ENST00000354241 VWA5AO00534 786 aa23.26■■□□□ 1.31
TRIM4-202ENST00000354241 FDX1P10109 184 aa23.26■■□□□ 1.31
TRIM4-202ENST00000354241 XRCC6P12956 609 aaKnown RBP eCLIP23.26■■□□□ 1.31
TRIM4-202ENST00000354241 ALAS1P13196 640 aa23.26■■□□□ 1.31
TRIM4-202ENST00000354241 DSG3P32926 999 aa23.26■■□□□ 1.31
TRIM4-202ENST00000354241 USP11P51784 963 aa23.26■■□□□ 1.31
TRIM4-202ENST00000354241 ARHGAP4P98171 946 aa23.26■■□□□ 1.31
TRIM4-202ENST00000354241 PPATQ06203 517 aa23.26■■□□□ 1.31
TRIM4-202ENST00000354241 CATSPERGQ6ZRH7 1159 aa23.26■■□□□ 1.31
TRIM4-202ENST00000354241 DHX58Q96C10 678 aa23.26■■□□□ 1.31
TRIM4-202ENST00000354241 WNK4Q96J92 1243 aa23.26■■□□□ 1.31
TRIM4-202ENST00000354241 A0A087X0B3 334 aa23.25■■□□□ 1.31
TRIM4-202ENST00000354241 TRAF5O00463 557 aa23.25■■□□□ 1.31
TRIM4-202ENST00000354241 COG2Q14746 738 aa23.25■■□□□ 1.31
TRIM4-202ENST00000354241 TEX2Q8IWB9 1127 aa23.25■■□□□ 1.31
TRIM4-202ENST00000354241 RBBP6Q7Z6E9 1792 aaKnown RBP23.25■■□□□ 1.31
TRIM4-202ENST00000354241 SREBF1P36956 1147 aa23.25■■□□□ 1.31
TRIM4-202ENST00000354241 TXLNAP40222 546 aa23.25■■□□□ 1.31
TRIM4-202ENST00000354241 TXKP42681 527 aa23.25■■□□□ 1.31
TRIM4-202ENST00000354241 MTMR9Q96QG7 549 aa23.25■■□□□ 1.31
TRIM4-202ENST00000354241 HOMER2Q9NSB8 354 aa23.25■■□□□ 1.31
TRIM4-202ENST00000354241 SPDYE5A6NIY4 337 aa23.24■■□□□ 1.31
TRIM4-202ENST00000354241 IRF6O14896 467 aa23.24■■□□□ 1.31
TRIM4-202ENST00000354241 CDC25AP30304 524 aa23.24■■□□□ 1.31
TRIM4-202ENST00000354241 FMR1Q06787 632 aaKnown RBP eCLIP23.24■■□□□ 1.318e-6■■■□□ 16.2
TRIM4-202ENST00000354241 GADL1Q6ZQY3 521 aa23.24■■□□□ 1.31
TRIM4-202ENST00000354241 KIAA1468Q9P260 1216 aa23.24■■□□□ 1.31
TRIM4-202ENST00000354241 LOC285556D6RIA3 1793 aa23.24■■□□□ 1.31
TRIM4-202ENST00000354241 ACTN4O43707 911 aaKnown RBP23.23■■□□□ 1.31
TRIM4-202ENST00000354241 TECP42680 631 aa23.23■■□□□ 1.31
TRIM4-202ENST00000354241 CRYGNQ8WXF5 182 aa23.23■■□□□ 1.31
TRIM4-202ENST00000354241 PNMA2Q9UL42 364 aa23.23■■□□□ 1.31
TRIM4-202ENST00000354241 PP2D1A8MPX8 630 aa23.23■■□□□ 1.31
TRIM4-202ENST00000354241 NFIBO00712 420 aa23.23■■□□□ 1.31
TRIM4-202ENST00000354241 MARCH6O60337 910 aa23.23■■□□□ 1.31
TRIM4-202ENST00000354241 PNOCQ13519 176 aa23.23■■□□□ 1.31
TRIM4-202ENST00000354241 TREML2Q5T2D2 321 aa23.23■■□□□ 1.31
TRIM4-202ENST00000354241 CLEC4DQ8WXI8 215 aa23.23■■□□□ 1.31
TRIM4-202ENST00000354241 HOOK1Q9UJC3 728 aaKnown RBP23.23■■□□□ 1.31
TRIM4-202ENST00000354241 TMEM266Q2M3C6 531 aa23.22■■□□□ 1.31
TRIM4-202ENST00000354241 ANO6Q4KMQ2 910 aa23.22■■□□□ 1.31
TRIM4-202ENST00000354241 MOXD1Q6UVY6 613 aa23.22■■□□□ 1.31
TRIM4-202ENST00000354241 MCF2L2Q86YR7 1114 aa23.22■■□□□ 1.31
TRIM4-202ENST00000354241 OPTNQ96CV9 577 aa23.22■■□□□ 1.31
TRIM4-202ENST00000354241 AK8Q96MA6 479 aa23.22■■□□□ 1.31
TRIM4-202ENST00000354241 EHMT1Q9H9B1 1298 aa23.22■■□□□ 1.31
TRIM4-202ENST00000354241 CYP3A7-CYP3A51PA0A087WV96 503 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 DCAF8L1A6NGE4 600 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 FOXN1O15353 648 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 CYP3A7P24462 503 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 UBA7P41226 1012 aa23.21■■□□□ 1.31
TRIM4-202ENST00000354241 PPIL2Q13356 520 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms