RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 CACNA2D4Q7Z3S7 1137 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
SMPD4-201ENST00000351288 CNKSR1Q969H4 720 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 RHOXF2Q9BQY4 288 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 ADD3Q9UEY8 706 aaKnown RBP11.64□□□□□ -0.55
SMPD4-201ENST00000351288 BCL9LQ86UU0 1499 aa11.64□□□□□ -0.55
SMPD4-201ENST00000351288 DDX60Q8IY21 1712 aaKnown RBP11.63□□□□□ -0.55
SMPD4-201ENST00000351288 A0A1B0GTH6 734 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 KIF2AO00139 706 aaPredicted RBP11.63□□□□□ -0.55
SMPD4-201ENST00000351288 SRGNP10124 158 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 EEF2P13639 858 aaKnown RBP11.63□□□□□ -0.55
SMPD4-201ENST00000351288 NT5DC1Q5TFE4 455 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 KRT222Q8N1A0 295 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 CAGE1Q8TC20 777 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 SUGCTQ9HAC7 445 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 SEPT11Q9NVA2 429 aaKnown RBP11.63□□□□□ -0.55
SMPD4-201ENST00000351288 RPN1P04843 607 aaKnown RBP11.63□□□□□ -0.55
SMPD4-201ENST00000351288 PLCG1P19174 1290 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 POTEDQ86YR6 584 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 KANSL2Q9H9L4 492 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 GUCA1BQ9UMX6 200 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 CACNA1SQ13698 1873 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 PCP11498 1178 aaKnown RBP11.63□□□□□ -0.55
SMPD4-201ENST00000351288 KRT9P35527 623 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 AMPD3Q01432 767 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 MCM6Q14566 821 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 SV2BQ7L1I2 683 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 CERS5Q8N5B7 392 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 GDAP1L1Q96MZ0 367 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 CRACR2AQ9BSW2 395 aa11.63□□□□□ -0.55
SMPD4-201ENST00000351288 KCNJ18B7U540 433 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 STX10O60499 249 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 CCDC175P0C221 793 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 FCER1AP12319 257 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 BAG6P46379 1132 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 TTLL12Q14166 644 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-201ENST00000351288 KCNJ12Q14500 433 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 KCTD19Q17RG1 926 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-201ENST00000351288 NIM1KQ8IY84 436 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 MAD2L2Q9UI95 211 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 PCDHA12Q9UN75 941 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 TRAF5O00463 557 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 ERVK-24P63145 666 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 MRPS25P82663 173 aaKnown RBP11.62□□□□□ -0.55
SMPD4-201ENST00000351288 TBC1D8BQ0IIM8 1120 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 E2F4Q16254 413 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 SKIDA1Q1XH10 827 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 HERC4Q5GLZ8 1057 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-201ENST00000351288 PDXDC2PQ6P474 469 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 TMCO3Q6UWJ1 677 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 PROM2Q8N271 834 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 SLC35F6Q8N357 371 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 NEDD1Q8NHV4 660 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 GPR75-ASB3A0A0A6YYF3 556 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 TADA3O75528 432 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 NSMFQ6X4W1 530 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 SPATA20Q8TB22 786 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 FAM207AQ9NSI2 230 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-201ENST00000351288 RMND1Q9NWS8 449 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 ADGRG1Q9Y653 693 aa11.62□□□□□ -0.55
SMPD4-201ENST00000351288 ERCC5P28715 1186 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-201ENST00000351288 COPB1P53618 953 aaKnown RBP11.61□□□□□ -0.55
SMPD4-201ENST00000351288 GRM4Q14833 912 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 FKBP15Q5T1M5 1219 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 SH3RF1Q7Z6J0 888 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 ADGRF4Q8IZF3 695 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 GSDMAQ96QA5 445 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 CRAMP1Q96RY5 1269 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMPD4-201ENST00000351288 HDAC6Q9UBN7 1215 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 PCDHA6Q9UN73 950 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 PCDHA8Q9Y5H6 950 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 PHLPP1O60346 1717 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 DDTLA6NHG4 134 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-201ENST00000351288 B4DLN1 442 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 SRGAP2O75044 1071 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 MFAP3LO75121 409 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 PNMA6AP0CW24 399 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-201ENST00000351288 MATR3P43243 847 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMPD4-201ENST00000351288 CAPZA3Q96KX2 299 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 PSMB7Q99436 277 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 MTMR4Q9NYA4 1195 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 DDX25Q9UHL0 483 aaKnown RBP11.61□□□□□ -0.55
SMPD4-201ENST00000351288 SASH3O75995 380 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 PTPROQ16827 1216 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 NAALADL2Q58DX5 795 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 FLAD1Q8NFF5 587 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 SH2D3AQ9BRG2 576 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 PI4KBQ9UBF8 816 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 KIAA1024Q9UPX6 916 aa11.61□□□□□ -0.55
SMPD4-201ENST00000351288 DUOX1Q9NRD9 1551 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 COL16A1Q07092 1604 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-201ENST00000351288 MYCLP12524 364 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-201ENST00000351288 PABPC4Q13310 644 aaKnown RBP eCLIP11.6□□□□□ -0.553e-6■□□□□ 9
SMPD4-201ENST00000351288 SBK1Q52WX2 424 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 TTLL6Q8N841 843 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 TRIML1Q8N9V2 468 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 RDH13Q8NBN7 331 aa11.6□□□□□ -0.55
SMPD4-201ENST00000351288 PRMT6Q96LA8 375 aaPredicted RBP11.6□□□□□ -0.55
SMPD4-201ENST00000351288 NOC4LQ9BVI4 516 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms