RNA–Protein interactions for RNA: ENST00000347140.7

R3HDM2-201, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-201ENST00000347140 ZIM3Q96PE6 472 aa17.21■□□□□ 0.35
R3HDM2-201ENST00000347140 ZHX3Q9H4I2 956 aa17.21■□□□□ 0.35
R3HDM2-201ENST00000347140 SHOX2O60902 331 aaPredicted RBP17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 KRT14P02533 472 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 WDR59Q6PJI9 974 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 RUFY4Q6ZNE9 571 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 CUEDC2Q9H467 287 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 MAGEF1Q9HAY2 307 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 SEC63Q9UGP8 760 aaKnown RBP17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 PCDHA4Q9UN74 947 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 ATRNO75882 1429 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 TULP1O00294 542 aaPredicted RBP17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 KRT18P05783 430 aaKnown RBP17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 RAPGEF1Q13905 1077 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 CCNT1O60563 726 aaKnown RBP17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 IFI16Q16666 785 aaKnown RBP17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 STX8Q9UNK0 236 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 CAPN6Q9Y6Q1 641 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 MYO1FO00160 1098 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 CHUKO15111 745 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 SFMBT2Q5VUG0 894 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 MSL1Q68DK7 614 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 NDST4Q9H3R1 872 aa17.2■□□□□ 0.34
R3HDM2-201ENST00000347140 PCP11498 1178 aaKnown RBP17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 PLCG1P19174 1290 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 PMS1P54277 932 aaKnown RBP17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 DHX37Q8IY37 1157 aaKnown RBP17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 EPN3Q9H201 632 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 HMGB1P1B2RPK0 211 aaPredicted RBP17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 LSP1P33241 339 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 DYNLL1P63167 89 aaKnown RBP17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 MEA1Q16626 185 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 PFKFB3Q16875 520 aaPredicted RBP17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 WHAMMQ8TF30 809 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 EHD2Q9NZN4 543 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 RCCD1A6NED2 376 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 AGPSO00116 658 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 PPP1R37O75864 691 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 GBP2P32456 591 aaPredicted RBP17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 CTNNA1P35221 906 aaKnown RBP17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 MAN2A1Q16706 1144 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 VWA3BQ502W6 1294 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 ANKRD40Q6AI12 368 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 DYMQ7RTS9 669 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 CCDC50Q8IVM0 306 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 ZNF444Q8N0Y2 327 aaPredicted RBP17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 SRBD1Q8N5C6 995 aaKnown RBP17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 RBM12Q9NTZ6 932 aaKnown RBP17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 ASAP1Q9ULH1 1129 aa17.19■□□□□ 0.34
R3HDM2-201ENST00000347140 MST1RQ04912 1400 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 RHOBTB3O94955 611 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 PLEKP08567 350 aaPredicted RBP17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 EHHADHQ08426 723 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 NEDD9Q14511 834 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 NLRP14Q86W24 1093 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 GIMAP8Q8ND71 665 aaPredicted RBP17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 WNT7AO00755 349 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 FTCDO95954 541 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 SEC23AQ15436 765 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 CREG2Q8IUH2 290 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 LRRC27Q9C0I9 530 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 GOPCQ9HD26 462 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 RIC1Q4ADV7 1423 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 TRAF5O00463 557 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 OR52Z1P0C646 297 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 SWT1Q5T5J6 900 aaKnown RBP17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 ZNF473Q8WTR7 871 aaKnown RBP17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 MCM9Q9NXL9 1143 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 KAT6BQ8WYB5 2073 aa17.18■□□□□ 0.34
R3HDM2-201ENST00000347140 LRRC53A6NM62 1247 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 ATP2B2Q01814 1243 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 RPS6KA1Q15418 735 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 RNPC3Q96LT9 517 aaKnown RBP17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 VAT1LQ9HCJ6 419 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 CEP104O60308 925 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 SNCBQ16143 134 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 ZNF662Q6ZS27 426 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 ATP6V1G3Q96LB4 118 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 SPAG5Q96R06 1193 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 NUCKS1Q9H1E3 243 aaKnown RBP17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 C6orf50Q9HD87 102 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 PLAAQ9Y263 795 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 HAUS3Q68CZ6 603 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 TTI2Q6NXR4 508 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 CACNA2D3Q8IZS8 1091 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 ZNF507Q8TCN5 953 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 MS4A14Q96JA4 679 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 LAD1O00515 517 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 NAA35Q5VZE5 725 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 VPS36Q86VN1 386 aa17.17■□□□□ 0.34
R3HDM2-201ENST00000347140 KCNK3O14649 394 aa17.16■□□□□ 0.34
R3HDM2-201ENST00000347140 PRLRP16471 622 aa17.16■□□□□ 0.34
R3HDM2-201ENST00000347140 TECP42680 631 aa17.16■□□□□ 0.34
R3HDM2-201ENST00000347140 CARSP49589 748 aaKnown RBP17.16■□□□□ 0.34
R3HDM2-201ENST00000347140 ITIH3Q06033 890 aa17.16■□□□□ 0.34
R3HDM2-201ENST00000347140 GFPT1Q06210 699 aaPredicted RBP17.16■□□□□ 0.34
R3HDM2-201ENST00000347140 DZIP1Q86YF9 867 aaKnown RBP17.16■□□□□ 0.34
R3HDM2-201ENST00000347140 TSEN2Q8NCE0 465 aaKnown RBP17.16■□□□□ 0.34
R3HDM2-201ENST00000347140 CCT8L2Q96SF2 557 aa17.16■□□□□ 0.34
R3HDM2-201ENST00000347140 CNTNAP5Q8WYK1 1306 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms