RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 SFPQP23246 707 aaKnown RBP eCLIP15.9■□□□□ 0.14
CDK5RAP1-202ENST00000346416 PTPN21Q16825 1174 aa15.9■□□□□ 0.14
CDK5RAP1-202ENST00000346416 TMEM266Q2M3C6 531 aa15.9■□□□□ 0.14
CDK5RAP1-202ENST00000346416 SYDE2Q5VT97 1194 aa15.9■□□□□ 0.14
CDK5RAP1-202ENST00000346416 CIAPIN1Q6FI81 312 aa15.9■□□□□ 0.14
CDK5RAP1-202ENST00000346416 JDP2Q8WYK2 163 aa15.9■□□□□ 0.14
CDK5RAP1-202ENST00000346416 MTFR1LQ9H019 292 aa15.9■□□□□ 0.14
CDK5RAP1-202ENST00000346416 MAGEF1Q9HAY2 307 aa15.9■□□□□ 0.14
CDK5RAP1-202ENST00000346416 ARHGEF10LQ9HCE6 1279 aa15.9■□□□□ 0.14
CDK5RAP1-202ENST00000346416 DDX25Q9UHL0 483 aaKnown RBP15.9■□□□□ 0.14
CDK5RAP1-202ENST00000346416 CTNND2Q9UQB3 1225 aa15.9■□□□□ 0.14
CDK5RAP1-202ENST00000346416 UTRNP46939 3433 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 WNT10BO00744 389 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 DHX8Q14562 1220 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 NBPF9Q3BBW0 867 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 BTNL9Q6UXG8 535 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 MIGA2Q7L4E1 593 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 FAM83AQ86UY5 434 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 ACER1Q8TDN7 264 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 ZBED3Q96IU2 234 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 ZBTB21Q9ULJ3 1066 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 GDAQ9Y2T3 454 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 KLRC4O43908 158 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 KCNB1Q14721 858 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 FBXO11Q86XK2 927 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 CALML4Q96GE6 196 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 RAB34Q9BZG1 259 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 FER1L6Q2WGJ9 1857 aa15.89■□□□□ 0.13
CDK5RAP1-202ENST00000346416 SHTN1A0MZ66 631 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 POTEMA6NI47 508 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 MEIS2O14770 477 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 TBC1D12O60347 775 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 COBLO75128 1261 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 GCFC2P16383 781 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 PDIA5Q14554 519 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 USH1GQ495M9 461 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 KMT5BQ4FZB7 885 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 CDKAL1Q5VV42 579 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 CCDC125Q86Z20 511 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 MYOZ2Q9NPC6 264 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 RWDD2AQ9UIY3 292 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 MAPK8IP1Q9UQF2 711 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 TMX2Q9Y320 296 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 NFKBIEO00221 500 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 PRCPP42785 496 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 PAK1Q13153 545 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 KIAA1755Q5JYT7 1200 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 HAS1Q92839 578 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 ANO3Q9BYT9 981 aa15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 BRCA1P38398 1863 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP1-202ENST00000346416 RHOBTB3O94955 611 aa15.87■□□□□ 0.13
CDK5RAP1-202ENST00000346416 GRB10Q13322 594 aa15.87■□□□□ 0.13
CDK5RAP1-202ENST00000346416 TPD52L1Q16890 204 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP1-202ENST00000346416 APTXQ7Z2E3 356 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP1-202ENST00000346416 NELFBQ8WX92 580 aa15.87■□□□□ 0.13
CDK5RAP1-202ENST00000346416 TRIM9Q9C026 710 aa15.87■□□□□ 0.13
CDK5RAP1-202ENST00000346416 GOPCQ9HD26 462 aa15.87■□□□□ 0.13
CDK5RAP1-202ENST00000346416 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP1-202ENST00000346416 PGAP2Q9UHJ9 254 aa15.87■□□□□ 0.13
CDK5RAP1-202ENST00000346416 PRR12Q9ULL5 1215 aa15.87■□□□□ 0.13
CDK5RAP1-202ENST00000346416 A0A1B0GTH6 734 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 USP11P51784 963 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 STAT2P52630 851 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 SEMA3FQ13275 785 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 AP3B2Q13367 1082 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 NR1I3Q14994 352 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 TNIP1Q15025 636 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 GJA10Q969M2 543 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 NAP1L4Q99733 375 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 MARCH6O60337 910 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 CAP2P40123 477 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 AMPD3Q01432 767 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 KRT79Q5XKE5 535 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 SPECC1LQ69YQ0 1117 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 ADSSL1Q8N142 457 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 GIMAP8Q8ND71 665 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 C16orf45Q96MC5 204 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 PNMA5Q96PV4 448 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 P2RX7Q99572 595 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 C7orf25Q9BPX7 421 aa15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 SCAF8Q9UPN6 1271 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP1-202ENST00000346416 TAL1P17542 331 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 FAM83BQ5T0W9 1011 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 SNX29Q8TEQ0 813 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 CDK5RAP3Q96JB5 506 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 CTAGE1Q96RT6 745 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 NUDT12Q9BQG2 462 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 BLOC1S4Q9NUP1 217 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 STK17AQ9UEE5 414 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 PCDHA12Q9UN75 941 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 USP27XA6NNY8 438 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 NRDCO43847 1150 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 EGFRP00533 1210 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 ASIC1P78348 528 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 TBX2Q13207 712 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 SV2BQ7L1I2 683 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 ADD3Q9UEY8 706 aaKnown RBP15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 BCS1LQ9Y276 419 aa15.85■□□□□ 0.13
CDK5RAP1-202ENST00000346416 SMCHD1A6NHR9 2005 aa15.84■□□□□ 0.13
CDK5RAP1-202ENST00000346416 CYP3A7-CYP3A51PA0A087WV96 503 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms