RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 KLHDC9Q8NEP7 349 aa18.72■□□□□ 0.59
RAB5C-201ENST00000346213 RIOX1Q9H6W3 641 aa18.72■□□□□ 0.59
RAB5C-201ENST00000346213 DAXXQ9UER7 740 aaPredicted RBP18.72■□□□□ 0.59
RAB5C-201ENST00000346213 EXOSC10Q01780 885 aaKnown RBP18.71■□□□□ 0.59
RAB5C-201ENST00000346213 BECN1Q14457 450 aa18.71■□□□□ 0.59
RAB5C-201ENST00000346213 RBAK-RBAKDNI3L0D1 243 aa18.7■□□□□ 0.58
RAB5C-201ENST00000346213 RARBP10826 455 aa18.7■□□□□ 0.58
RAB5C-201ENST00000346213 SMPD1P17405 629 aa18.7■□□□□ 0.58
RAB5C-201ENST00000346213 CAPN2P17655 700 aa18.7■□□□□ 0.58
RAB5C-201ENST00000346213 EDNRBP24530 442 aa18.7■□□□□ 0.58
RAB5C-201ENST00000346213 RNF207Q6ZRF8 634 aa18.7■□□□□ 0.58
RAB5C-201ENST00000346213 SYTL5Q8TDW5 730 aaPredicted RBP18.7■□□□□ 0.58
RAB5C-201ENST00000346213 KCNB2Q92953 911 aa18.7■□□□□ 0.58
RAB5C-201ENST00000346213 ABHD16BQ9H3Z7 469 aa18.7■□□□□ 0.58
RAB5C-201ENST00000346213 RBM27Q9P2N5 1060 aaKnown RBP18.7■□□□□ 0.58
RAB5C-201ENST00000346213 GNEQ9Y223 722 aaKnown RBP18.7■□□□□ 0.58
RAB5C-201ENST00000346213 HOMER1Q86YM7 354 aa18.69■□□□□ 0.58
RAB5C-201ENST00000346213 PIBF1Q8WXW3 757 aa18.69■□□□□ 0.58
RAB5C-201ENST00000346213 TAAR1Q96RJ0 339 aa18.69■□□□□ 0.58
RAB5C-201ENST00000346213 UPF3AQ9H1J1 476 aaKnown RBP18.69■□□□□ 0.58
RAB5C-201ENST00000346213 BRPF3Q9ULD4 1205 aa18.69■□□□□ 0.58
RAB5C-201ENST00000346213 FAM184BQ9ULE4 1060 aa18.69■□□□□ 0.58
RAB5C-201ENST00000346213 PHF24Q9UPV7 400 aa18.69■□□□□ 0.58
RAB5C-201ENST00000346213 BEX3Q00994 111 aa18.69■□□□□ 0.58
RAB5C-201ENST00000346213 SNX17Q15036 470 aa18.69■□□□□ 0.58
RAB5C-201ENST00000346213 FBXO11Q86XK2 927 aa18.69■□□□□ 0.58
RAB5C-201ENST00000346213 SRBD1Q8N5C6 995 aaKnown RBP18.69■□□□□ 0.58
RAB5C-201ENST00000346213 NUP133Q8WUM0 1156 aa18.69■□□□□ 0.58
RAB5C-201ENST00000346213 A0A1W2PQ45 241 aaPredicted RBP18.68■□□□□ 0.58
RAB5C-201ENST00000346213 A0A1W2PQY0 241 aa18.68■□□□□ 0.58
RAB5C-201ENST00000346213 ZBTB5O15062 677 aa18.68■□□□□ 0.58
RAB5C-201ENST00000346213 DHX16O60231 1041 aaKnown RBP18.68■□□□□ 0.58
RAB5C-201ENST00000346213 ARIH2O95376 493 aa18.68■□□□□ 0.58
RAB5C-201ENST00000346213 MCM5P33992 734 aa18.68■□□□□ 0.58
RAB5C-201ENST00000346213 RTP1P59025 263 aa18.68■□□□□ 0.58
RAB5C-201ENST00000346213 TSGA10IPQ3SY00 556 aa18.68■□□□□ 0.58
RAB5C-201ENST00000346213 TRIM60Q495X7 471 aa18.68■□□□□ 0.58
RAB5C-201ENST00000346213 HABP4Q5JVS0 413 aaKnown RBP18.68■□□□□ 0.58
RAB5C-201ENST00000346213 SLC39A5Q6ZMH5 540 aa18.68■□□□□ 0.58
RAB5C-201ENST00000346213 SNX14Q9Y5W7 946 aa18.68■□□□□ 0.58
RAB5C-201ENST00000346213 hCG_1642624A0A1W2PR95 340 aa18.67■□□□□ 0.58
RAB5C-201ENST00000346213 DUSP11O75319 330 aaKnown RBP18.67■□□□□ 0.58
RAB5C-201ENST00000346213 KCNA10Q16322 511 aa18.67■□□□□ 0.58
RAB5C-201ENST00000346213 SH3RF1Q7Z6J0 888 aa18.67■□□□□ 0.58
RAB5C-201ENST00000346213 ABCB11O95342 1321 aa18.67■□□□□ 0.58
RAB5C-201ENST00000346213 BAZ2BQ9UIF8 2168 aaKnown RBP18.67■□□□□ 0.58
RAB5C-201ENST00000346213 ASB14A6NK59 587 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 HSPA4P34932 840 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 GJA9P57773 515 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 ARRDC4Q8NCT1 418 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 IL31RAQ8NI17 732 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 COPS5Q92905 334 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 NEK1Q96PY6 1258 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 ERICH2A1L162 156 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 KBTBD13C9JR72 458 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 DDAH1O94760 285 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 ITGB8P26012 769 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 HOXA13P31271 388 aaPredicted RBP18.66■□□□□ 0.58
RAB5C-201ENST00000346213 HSD17B4P51659 736 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 ACLYP53396 1101 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 NKX3-2P78367 333 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 GHRHRQ02643 423 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 TNFAIP2Q03169 654 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 CATIPQ7Z7H3 387 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 RGS22Q8NE09 1264 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 ZFP91Q96JP5 570 aaPredicted RBP18.66■□□□□ 0.58
RAB5C-201ENST00000346213 TMEM87BQ96K49 555 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 GDF15Q99988 308 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 USP26Q9BXU7 913 aa18.66■□□□□ 0.58
RAB5C-201ENST00000346213 LTBP2Q14767 1821 aa18.65■□□□□ 0.58
RAB5C-201ENST00000346213 REC8O95072 547 aa18.65■□□□□ 0.58
RAB5C-201ENST00000346213 CST5P28325 142 aaPredicted RBP18.65■□□□□ 0.58
RAB5C-201ENST00000346213 LIFRP42702 1097 aa18.65■□□□□ 0.58
RAB5C-201ENST00000346213 MAGEA10P43363 369 aaPredicted RBP18.65■□□□□ 0.58
RAB5C-201ENST00000346213 SART3Q15020 963 aaKnown RBP18.65■□□□□ 0.58
RAB5C-201ENST00000346213 SGMS1Q86VZ5 419 aa18.65■□□□□ 0.58
RAB5C-201ENST00000346213 AMNQ9BXJ7 453 aa18.65■□□□□ 0.58
RAB5C-201ENST00000346213 FAM217BQ9NTX9 383 aaPredicted RBP18.65■□□□□ 0.58
RAB5C-201ENST00000346213 ATP11BQ9Y2G3 1177 aa18.65■□□□□ 0.58
RAB5C-201ENST00000346213 PCDHA1Q9Y5I3 950 aa18.65■□□□□ 0.58
RAB5C-201ENST00000346213 TRIOBPQ9H2D6 2365 aa18.65■□□□□ 0.58
RAB5C-201ENST00000346213 RBM47A0AV96 593 aaKnown RBP18.64■□□□□ 0.57
RAB5C-201ENST00000346213 TRIM43BA6NCK2 446 aa18.64■□□□□ 0.57
RAB5C-201ENST00000346213 C6orf222P0C671 652 aaPredicted RBP18.64■□□□□ 0.57
RAB5C-201ENST00000346213 FUT2Q10981 343 aa18.64■□□□□ 0.57
RAB5C-201ENST00000346213 APOA5Q6Q788 366 aa18.64■□□□□ 0.57
RAB5C-201ENST00000346213 TLK2Q86UE8 772 aa18.64■□□□□ 0.57
RAB5C-201ENST00000346213 PPP1R13LQ8WUF5 828 aa18.64■□□□□ 0.57
RAB5C-201ENST00000346213 TRIM43Q96BQ3 446 aaPredicted RBP18.64■□□□□ 0.57
RAB5C-201ENST00000346213 MTA3Q9BTC8 594 aa18.64■□□□□ 0.57
RAB5C-201ENST00000346213 NR2E3Q9Y5X4 410 aa18.64■□□□□ 0.57
RAB5C-201ENST00000346213 GRIN2DO15399 1336 aa18.64■□□□□ 0.57
RAB5C-201ENST00000346213 RGS20O76081 388 aa18.63■□□□□ 0.57
RAB5C-201ENST00000346213 CFBP00751 764 aa18.63■□□□□ 0.57
RAB5C-201ENST00000346213 ASGR1P07306 291 aa18.63■□□□□ 0.57
RAB5C-201ENST00000346213 RNF180Q86T96 592 aa18.63■□□□□ 0.57
RAB5C-201ENST00000346213 MICU3Q86XE3 530 aa18.63■□□□□ 0.57
RAB5C-201ENST00000346213 SPZ1Q9BXG8 430 aa18.63■□□□□ 0.57
RAB5C-201ENST00000346213 VTA1Q9NP79 307 aa18.63■□□□□ 0.57
RAB5C-201ENST00000346213 PDLIM7Q9NR12 457 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms