RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 CCT2P78371 535 aaKnown RBP13.68□□□□□ -0.22
SNCA-202ENST00000345009 PRKCZQ05513 592 aa13.68□□□□□ -0.22
SNCA-202ENST00000345009 GRB14Q14449 540 aa13.68□□□□□ -0.22
SNCA-202ENST00000345009 MORN1Q5T089 497 aa13.68□□□□□ -0.22
SNCA-202ENST00000345009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.68□□□□□ -0.22
SNCA-202ENST00000345009 RGS22Q8NE09 1264 aa13.68□□□□□ -0.22
SNCA-202ENST00000345009 PIBF1Q8WXW3 757 aa13.68□□□□□ -0.22
SNCA-202ENST00000345009 KIF2CQ99661 725 aa13.68□□□□□ -0.22
SNCA-202ENST00000345009 GJD2Q9UKL4 321 aa13.68□□□□□ -0.22
SNCA-202ENST00000345009 HPS5Q9UPZ3 1129 aa13.68□□□□□ -0.22
SNCA-202ENST00000345009 B4DLN1 442 aa13.67□□□□□ -0.22
SNCA-202ENST00000345009 SNPHO15079 494 aa13.67□□□□□ -0.22
SNCA-202ENST00000345009 PFKFB2O60825 505 aa13.67□□□□□ -0.22
SNCA-202ENST00000345009 CYP2B6P20813 491 aa13.67□□□□□ -0.22
SNCA-202ENST00000345009 MRPL12P52815 198 aaKnown RBP13.67□□□□□ -0.22
SNCA-202ENST00000345009 STK3Q13188 491 aa13.67□□□□□ -0.22
SNCA-202ENST00000345009 NSMFQ6X4W1 530 aa13.67□□□□□ -0.22
SNCA-202ENST00000345009 CMTR1Q8N1G2 835 aaKnown RBP13.67□□□□□ -0.22
SNCA-202ENST00000345009 SAMD3Q8N6K7 520 aa13.67□□□□□ -0.22
SNCA-202ENST00000345009 PXYLP1Q8TE99 480 aa13.67□□□□□ -0.22
SNCA-202ENST00000345009 MPHOSPH6Q99547 160 aaKnown RBP13.67□□□□□ -0.22
SNCA-202ENST00000345009 APBA2Q99767 749 aa13.67□□□□□ -0.22
SNCA-202ENST00000345009 LARP6Q9BRS8 491 aaKnown RBP13.67□□□□□ -0.22
SNCA-202ENST00000345009 SH2B1Q9NRF2 756 aaPredicted RBP13.67□□□□□ -0.22
SNCA-202ENST00000345009 MAP3K20Q9NYL2 800 aaKnown RBP13.67□□□□□ -0.22
SNCA-202ENST00000345009 BIN2Q9UBW5 565 aaPredicted RBP13.67□□□□□ -0.22
SNCA-202ENST00000345009 TPCN1Q9ULQ1 816 aa13.67□□□□□ -0.22
SNCA-202ENST00000345009 DIS3Q9Y2L1 958 aaKnown RBP13.67□□□□□ -0.22
SNCA-202ENST00000345009 V9GY48 417 aaPredicted RBP13.67□□□□□ -0.22
SNCA-202ENST00000345009 NID2Q14112 1375 aa13.67□□□□□ -0.22
SNCA-202ENST00000345009 hCG_1984214I3L0E3 225 aa13.66□□□□□ -0.22
SNCA-202ENST00000345009 ADCY3O60266 1144 aa13.66□□□□□ -0.22
SNCA-202ENST00000345009 HOXC6P09630 235 aa13.66□□□□□ -0.22
SNCA-202ENST00000345009 IFNAR1P17181 557 aa13.66□□□□□ -0.22
SNCA-202ENST00000345009 CDC27P30260 824 aa13.66□□□□□ -0.22
SNCA-202ENST00000345009 SSRP1Q08945 709 aaKnown RBP13.66□□□□□ -0.22
SNCA-202ENST00000345009 SLC9C1Q4G0N8 1177 aa13.66□□□□□ -0.22
SNCA-202ENST00000345009 RNF207Q6ZRF8 634 aa13.66□□□□□ -0.22
SNCA-202ENST00000345009 NOL8Q76FK4 1167 aaKnown RBP13.66□□□□□ -0.22
SNCA-202ENST00000345009 ZNF713Q8N859 430 aaPredicted RBP13.66□□□□□ -0.22
SNCA-202ENST00000345009 CCDC12Q8WUD4 166 aaPredicted RBP13.66□□□□□ -0.22
SNCA-202ENST00000345009 FAM217BQ9NTX9 383 aaPredicted RBP13.66□□□□□ -0.22
SNCA-202ENST00000345009 PCDH10Q9P2E7 1040 aa13.66□□□□□ -0.22
SNCA-202ENST00000345009 PARP14Q460N5 1801 aa13.66□□□□□ -0.22
SNCA-202ENST00000345009 DOCK3Q8IZD9 2030 aa13.66□□□□□ -0.22
SNCA-202ENST00000345009 PTPDC1A2A3K4 754 aa13.65□□□□□ -0.22
SNCA-202ENST00000345009 PRPF3O43395 683 aaKnown RBP13.65□□□□□ -0.22
SNCA-202ENST00000345009 GRK4P32298 578 aa13.65□□□□□ -0.22
SNCA-202ENST00000345009 UBXN2AP68543 259 aa13.65□□□□□ -0.22
SNCA-202ENST00000345009 MFSD14CQ5VZR4 134 aa13.65□□□□□ -0.22
SNCA-202ENST00000345009 TEX2Q8IWB9 1127 aa13.65□□□□□ -0.22
SNCA-202ENST00000345009 BBXQ8WY36 941 aaPredicted RBP13.65□□□□□ -0.22
SNCA-202ENST00000345009 USP6NLQ92738 828 aa13.65□□□□□ -0.22
SNCA-202ENST00000345009 CUL5Q93034 780 aa13.65□□□□□ -0.22
SNCA-202ENST00000345009 RNF26Q9BY78 433 aaPredicted RBP13.65□□□□□ -0.22
SNCA-202ENST00000345009 MCOLN1Q9GZU1 580 aa13.65□□□□□ -0.22
SNCA-202ENST00000345009 GLT8D2Q9H1C3 349 aa13.65□□□□□ -0.22
SNCA-202ENST00000345009 NCOA5Q9HCD5 579 aaKnown RBP13.65□□□□□ -0.22
SNCA-202ENST00000345009 A1CFQ9NQ94 594 aaKnown RBP13.65□□□□□ -0.22
SNCA-202ENST00000345009 ADD3Q9UEY8 706 aaKnown RBP13.65□□□□□ -0.22
SNCA-202ENST00000345009 GABRQQ9UN88 632 aa13.65□□□□□ -0.22
SNCA-202ENST00000345009 PTCH2Q9Y6C5 1203 aa13.65□□□□□ -0.22
SNCA-202ENST00000345009 A0A0G2JMZ2 1700 aa13.64□□□□□ -0.23
SNCA-202ENST00000345009 COL11A1P12107 1806 aaPredicted RBP13.64□□□□□ -0.23
SNCA-202ENST00000345009 FUT2Q10981 343 aa13.64□□□□□ -0.23
SNCA-202ENST00000345009 BAATQ14032 418 aaPredicted RBP13.64□□□□□ -0.23
SNCA-202ENST00000345009 SLC35G1Q2M3R5 365 aa13.64□□□□□ -0.23
SNCA-202ENST00000345009 MUM1L1Q5H9M0 696 aa13.64□□□□□ -0.23
SNCA-202ENST00000345009 COL13A1Q5TAT6 717 aaPredicted RBP13.64□□□□□ -0.23
SNCA-202ENST00000345009 HEATR3Q7Z4Q2 680 aa13.64□□□□□ -0.23
SNCA-202ENST00000345009 MSL3Q8N5Y2 521 aaKnown RBP13.64□□□□□ -0.23
SNCA-202ENST00000345009 CLEC4DQ8WXI8 215 aa13.64□□□□□ -0.23
SNCA-202ENST00000345009 WASF1Q92558 559 aa13.64□□□□□ -0.23
SNCA-202ENST00000345009 SLC26A6Q9BXS9 759 aa13.64□□□□□ -0.23
SNCA-202ENST00000345009 CYP39A1Q9NYL5 469 aa13.64□□□□□ -0.23
SNCA-202ENST00000345009 CNTNAP5Q8WYK1 1306 aa13.64□□□□□ -0.23
SNCA-202ENST00000345009 LOC102724159A0A0B4J2E5 919 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 ASB14A6NK59 587 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 GCOM1H8Y6P7 765 aaPredicted RBP13.63□□□□□ -0.23
SNCA-202ENST00000345009 NFIBO00712 420 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 CFBP00751 764 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 HMGCRP04035 888 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 PGK2P07205 417 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 POLR2MP0CAP2 368 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 SCG2P13521 617 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 XBP1P17861 261 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 NAPAP54920 295 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 CAP1Q01518 475 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 SCRN1Q12765 414 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 PWP2Q15269 919 aaKnown RBP13.63□□□□□ -0.23
SNCA-202ENST00000345009 NTRK3Q16288 839 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 ME3Q16798 604 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 PFKFB3Q16875 520 aaPredicted RBP13.63□□□□□ -0.23
SNCA-202ENST00000345009 OLFML2BQ68BL8 750 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 PPP1R18Q6NYC8 613 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 FAM177A1Q8N128 213 aaPredicted RBP13.63□□□□□ -0.23
SNCA-202ENST00000345009 PHKBQ93100 1093 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 GTF3C6Q969F1 213 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 PSTPIP2Q9H939 334 aa13.63□□□□□ -0.23
SNCA-202ENST00000345009 MGAMO43451 1857 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms