RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 CACNB2Q08289 660 aaPredicted RBP24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 SCRN1Q12765 414 aa24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 NTRK3Q16288 839 aa24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 GPKOWQ92917 476 aaPredicted RBP eCLIP24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 TMEM106CQ9BVX2 250 aa24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 RNF208Q9H0X6 261 aa24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 ADD3Q9UEY8 706 aaKnown RBP24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 IFNAR1P17181 557 aa24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 ME3Q16798 604 aa24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 ZNF467Q7Z7K2 595 aaPredicted RBP24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 TRIM22Q8IYM9 498 aa24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 HMX1Q9NP08 348 aaPredicted RBP24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 RBM27Q9P2N5 1060 aaKnown RBP24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 LIMCH1Q9UPQ0 1083 aa24.01■■□□□ 1.43
SMARCB1-202ENST00000344921 SOWAHBA6NEL2 793 aa24■■□□□ 1.43
SMARCB1-202ENST00000344921 CCL5P13501 91 aa24■■□□□ 1.43
SMARCB1-202ENST00000344921 MAF1Q9H063 256 aa24■■□□□ 1.43
SMARCB1-202ENST00000344921 UNC93B1Q9H1C4 597 aa24■■□□□ 1.43
SMARCB1-202ENST00000344921 RPTORQ8N122 1335 aa24■■□□□ 1.43
SMARCB1-202ENST00000344921 RBBP6Q7Z6E9 1792 aaKnown RBP23.99■■□□□ 1.43
SMARCB1-202ENST00000344921 OPLAHO14841 1288 aa23.99■■□□□ 1.43
SMARCB1-202ENST00000344921 PRPF3O43395 683 aaKnown RBP23.99■■□□□ 1.43
SMARCB1-202ENST00000344921 CNGA1P29973 690 aa23.99■■□□□ 1.43
SMARCB1-202ENST00000344921 SSRP1Q08945 709 aaKnown RBP23.99■■□□□ 1.43
SMARCB1-202ENST00000344921 MSL3Q8N5Y2 521 aaKnown RBP23.99■■□□□ 1.43
SMARCB1-202ENST00000344921 NECAB1Q8N987 351 aa23.99■■□□□ 1.43
SMARCB1-202ENST00000344921 RNF26Q9BY78 433 aaPredicted RBP23.99■■□□□ 1.43
SMARCB1-202ENST00000344921 ASB14A6NK59 587 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 GCOM1H8Y6P7 765 aaPredicted RBP23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 CDKL5O76039 1030 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 LARGE1O95461 756 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 POLR2MP0CAP2 368 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 HOXA13P31271 388 aaPredicted RBP23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 NAPAP54920 295 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 PRAMEF19Q5SWL8 479 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 WWC2Q6AWC2 1192 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 SYTL5Q8TDW5 730 aaPredicted RBP23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 CUL5Q93034 780 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 FGD4Q96M96 766 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 MAP3K20Q9NYL2 800 aaKnown RBP23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 CNPY2Q9Y2B0 182 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 SCG2P13521 617 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 PFKFB3Q16875 520 aaPredicted RBP23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 MAP3K21Q5TCX8 1036 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 MAMDC4Q6UXC1 1216 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 ARMCX2Q7L311 632 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 MPHOSPH6Q99547 160 aaKnown RBP23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 SYNGAP1Q96PV0 1343 aa23.98■■□□□ 1.43
SMARCB1-202ENST00000344921 hCG_1984214I3L0E3 225 aa23.97■■□□□ 1.43
SMARCB1-202ENST00000344921 ALDH5A1P51649 535 aaPredicted RBP23.97■■□□□ 1.43
SMARCB1-202ENST00000344921 HSD17B4P51659 736 aa23.97■■□□□ 1.43
SMARCB1-202ENST00000344921 SAMD3Q8N6K7 520 aa23.97■■□□□ 1.43
SMARCB1-202ENST00000344921 ZNF713Q8N859 430 aaPredicted RBP23.97■■□□□ 1.43
SMARCB1-202ENST00000344921 DNERQ8NFT8 737 aa23.97■■□□□ 1.43
SMARCB1-202ENST00000344921 PSTPIP2Q9H939 334 aa23.97■■□□□ 1.43
SMARCB1-202ENST00000344921 CCND3P30281 292 aaPredicted RBP23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 IL27Q8NEV9 243 aa23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 SMARCC2Q8TAQ2 1214 aa23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 GTF3C6Q969F1 213 aa23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 TAAR1Q96RJ0 339 aa23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 BARHL2Q9NY43 387 aa23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 B4DLN1 442 aa23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 IGHA2P01877 340 aa23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 MRPL12P52815 198 aaKnown RBP23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 FCHSD1Q86WN1 690 aa23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 ZSCAN31Q96LW9 406 aaPredicted RBP23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 RMDN3Q96TC7 470 aa23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 COL20A1Q9P218 1284 aa23.96■■□□□ 1.43
SMARCB1-202ENST00000344921 ASTN1O14525 1302 aa23.95■■□□□ 1.43
SMARCB1-202ENST00000344921 LCTP09848 1927 aa23.95■■□□□ 1.43
SMARCB1-202ENST00000344921 BRCA2P51587 3418 aa23.95■■□□□ 1.42
SMARCB1-202ENST00000344921 CAPN15O75808 1086 aa23.95■■□□□ 1.42
SMARCB1-202ENST00000344921 SNAI1O95863 264 aaPredicted RBP23.95■■□□□ 1.42
SMARCB1-202ENST00000344921 CYBAP13498 195 aa23.95■■□□□ 1.42
SMARCB1-202ENST00000344921 PKN1Q16512 942 aa23.95■■□□□ 1.42
SMARCB1-202ENST00000344921 ARHGEF16Q5VV41 709 aa23.95■■□□□ 1.42
SMARCB1-202ENST00000344921 NSUN6Q8TEA1 469 aaKnown RBP23.95■■□□□ 1.42
SMARCB1-202ENST00000344921 ZHX1Q9UKY1 873 aaPredicted RBP23.95■■□□□ 1.42
SMARCB1-202ENST00000344921 DDX49Q9Y6V7 483 aaKnown RBP23.95■■□□□ 1.42
SMARCB1-202ENST00000344921 STXBP3O00186 592 aa23.94■■□□□ 1.42
SMARCB1-202ENST00000344921 DEXIO95424 95 aa23.94■■□□□ 1.42
SMARCB1-202ENST00000344921 PPP1R18Q6NYC8 613 aa23.94■■□□□ 1.42
SMARCB1-202ENST00000344921 USP17L6PQ6QN14 398 aa23.94■■□□□ 1.42
SMARCB1-202ENST00000344921 CCDC12Q8WUD4 166 aaPredicted RBP23.94■■□□□ 1.42
SMARCB1-202ENST00000344921 DEFB118Q96PH6 123 aa23.94■■□□□ 1.42
SMARCB1-202ENST00000344921 ABHD16BQ9H3Z7 469 aa23.94■■□□□ 1.42
SMARCB1-202ENST00000344921 MCM3APO60318 1980 aa23.94■■□□□ 1.42
SMARCB1-202ENST00000344921 SOX10P56693 466 aa23.93■■□□□ 1.42
SMARCB1-202ENST00000344921 GHRHRQ02643 423 aa23.93■■□□□ 1.42
SMARCB1-202ENST00000344921 PDE4DQ08499 809 aa23.93■■□□□ 1.42
SMARCB1-202ENST00000344921 EEPD1Q7L9B9 569 aa23.93■■□□□ 1.42
SMARCB1-202ENST00000344921 TRPV1Q8NER1 839 aa23.93■■□□□ 1.42
SMARCB1-202ENST00000344921 NRBP1Q9UHY1 535 aa23.93■■□□□ 1.42
SMARCB1-202ENST00000344921 SMCO2A6NFE2 343 aa23.93■■□□□ 1.42
SMARCB1-202ENST00000344921 DTNBO60941 627 aa23.93■■□□□ 1.42
SMARCB1-202ENST00000344921 EIF2AK2P19525 551 aaKnown RBP23.93■■□□□ 1.42
SMARCB1-202ENST00000344921 ACVR2BQ13705 512 aa23.93■■□□□ 1.42
SMARCB1-202ENST00000344921 TYW1BQ6NUM6 668 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms