RNA–Protein interactions for RNA: ENST00000344638.4

DEFB108F-201, Transcript of defensin beta 108F (pseudogene), humanhuman

BASIC

Gene DEFB108F, Length 222 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB108F-201ENST00000344638 SPICE1Q8N0Z3 855 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 C12orf50Q8NA57 414 aaPredicted RBP4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 CLRN3Q8NCR9 226 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 C1orf162Q8NEQ5 155 aaPredicted RBP4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 NPLOC4Q8TAT6 608 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 FBXO41Q8TF61 875 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 RNF141Q8WVD5 230 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 EDARADDQ8WWZ3 215 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 AHCYL2Q96HN2 611 aaKnown RBP4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 PSMG3-AS1Q96PY0 264 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 MAF1Q9H063 256 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 SLC12A5Q9H2X9 1139 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 PIDD1Q9HB75 910 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 CYP4F12Q9HCS2 524 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 BSDC1Q9NW68 430 aaPredicted RBP4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 H2AFY2Q9P0M6 372 aaPredicted RBP4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 DDX20Q9UHI6 824 aaKnown RBP4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 USP25Q9UHP3 1055 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 INTUQ9ULD6 942 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 PNMA8BQ9ULN7 279 aaPredicted RBP4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 PCDHGA9Q9Y5G4 932 aaKnown RBP4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 PCDHGA8Q9Y5G5 932 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 PCDHGA7Q9Y5G6 932 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 PCDHGA6Q9Y5G7 932 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 PCDHGA3Q9Y5H0 932 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 PCDHGA2Q9Y5H1 932 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 NPFFR2Q9Y5X5 522 aa4.35□□□□□ -1.71
DEFB108F-201ENST00000344638 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 MEIS1O00470 390 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 APAF1O14727 1248 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 SH3BP5O60239 455 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 GAS7O60861 476 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 LTFP02788 710 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 SOD2P04179 222 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 RBP3P10745 1247 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 LCP1P13796 627 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 ITIH2P19823 946 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 SERPINB3P29508 390 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 GPR85P60893 370 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 GBX1Q14549 363 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 TMEM177Q53S58 311 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 CREB3L3Q68CJ9 461 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 CYB5RLQ6IPT4 315 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 PGM2L1Q6PCE3 622 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 RSPO2Q6UXX9 243 aaPredicted RBP4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 LBX2Q6XYB7 198 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 OVCH1Q7RTY7 1134 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 HDGFL2Q7Z4V5 671 aaPredicted RBP4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 FBXO11Q86XK2 927 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 CCDC103Q8IW40 242 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 ZC3H7AQ8IWR0 971 aaKnown RBP4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 PPIL6Q8IXY8 311 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 GALNT6Q8NCL4 622 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 C2CD4AQ8NCU7 369 aaPredicted RBP4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 E2F7Q96AV8 911 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 CLIP3Q96DZ5 547 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 ZFYVE21Q9BQ24 234 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 ASPNQ9BXN1 380 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 RNF208Q9H0X6 261 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 PTPRHQ9HD43 1115 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 PRDM11Q9NQV5 511 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 C14orf119Q9NWQ9 140 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 PRR13Q9NZ81 148 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 PNMA2Q9UL42 364 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 ZKSCAN5Q9Y2L8 839 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 SF3B6Q9Y3B4 125 aaKnown RBP4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 DAAM1Q9Y4D1 1078 aa4.34□□□□□ -1.71
DEFB108F-201ENST00000344638 PTPDC1A2A3K4 754 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 SHISA8B8ZZ34 492 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 C11orf95C9JLR9 678 aaPredicted RBP4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 AURKAO14965 403 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 TGM5O43548 720 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 ULK1O75385 1050 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 IFIT2P09913 472 aaKnown RBP4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 U2AF1L5P0DN76 240 aaPredicted RBP4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 NAT1P18440 290 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 CYP2C19P33261 490 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 CTSKP43235 329 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 RECQLP46063 649 aaPredicted RBP4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 KPNA1P52294 538 aaPredicted RBP4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 HTRA3P83110 453 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 U2AF1Q01081 240 aaKnown RBP eCLIP4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 FAPQ12884 760 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 GTF2H3Q13889 308 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 ZRSR2Q15696 482 aaKnown RBP4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 COBLL1Q53SF7 1204 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 TMEM240Q5SV17 173 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 TRAPPC3LQ5T215 181 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 ACAD11Q709F0 780 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 CMTR2Q8IYT2 770 aaKnown RBP4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 DTWD1Q8N5C7 304 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 CHST14Q8NCH0 376 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 LRGUKQ96M69 825 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 DSCC1Q9BVC3 393 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 COL25A1Q9BXS0 654 aaPredicted RBP4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 CELF4Q9BZC1 486 aaKnown RBP4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 ACSS3Q9H6R3 686 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 PPCSQ9HAB8 311 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 LGR6Q9HBX8 967 aa4.33□□□□□ -1.72
DEFB108F-201ENST00000344638 CABP5Q9NP86 173 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms